case fix for "PERCENT_TARGET_ORGANISM"

theiagen · Jan 23, 2024 · 6ec785d · 6ec785d
1 parent 273b98f
commit 6ec785d
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/tasks/taxon_id/task_kraken2.wdl b/tasks/taxon_id/task_kraken2.wdl
@@ -41,7 +41,7 @@ task kraken2_theiacov {
     else 
       percent_target_organism=""
     fi
-    echo $percent_target_organism | tee PERCENT_target_organism
+    echo $percent_target_organism | tee PERCENT_TARGET_ORGANISM
 
   >>>
   output {