From 7d58429e643a1d57e3ab644eab3e6a25a8c9ae43 Mon Sep 17 00:00:00 2001
From: sage-wright <sage.wright@theiagen.com>
Date: Tue, 17 Dec 2024 15:23:18 +0000
Subject: [PATCH] Deployed 2571a4f to main with MkDocs 1.6.1 and mike 2.1.3

---
 main/sitemap.xml    | 100 ++++++++++++++++++++++----------------------
 main/sitemap.xml.gz | Bin 757 -> 757 bytes
 2 files changed, 50 insertions(+), 50 deletions(-)

diff --git a/main/sitemap.xml b/main/sitemap.xml
index 3d7fe7985..6808e4262 100644
--- a/main/sitemap.xml
+++ b/main/sitemap.xml
@@ -2,202 +2,202 @@
 <urlset xmlns="http://www.sitemaps.org/schemas/sitemap/0.9">
     <url>
          <loc>https://theiagen.github.io/public_health_bioinformatics/main/</loc>
-         <lastmod>2024-12-16</lastmod>
+         <lastmod>2024-12-17</lastmod>
     </url>
     <url>
          <loc>https://theiagen.github.io/public_health_bioinformatics/main/assets/new_workflow_template/</loc>
-         <lastmod>2024-12-16</lastmod>
+         <lastmod>2024-12-17</lastmod>
     </url>
     <url>
          <loc>https://theiagen.github.io/public_health_bioinformatics/main/contributing/code_contribution/</loc>
-         <lastmod>2024-12-16</lastmod>
+         <lastmod>2024-12-17</lastmod>
     </url>
     <url>
          <loc>https://theiagen.github.io/public_health_bioinformatics/main/contributing/doc_contribution/</loc>
-         <lastmod>2024-12-16</lastmod>
+         <lastmod>2024-12-17</lastmod>
     </url>
     <url>
          <loc>https://theiagen.github.io/public_health_bioinformatics/main/getting_started/commandline/</loc>
-         <lastmod>2024-12-16</lastmod>
+         <lastmod>2024-12-17</lastmod>
     </url>
     <url>
          <loc>https://theiagen.github.io/public_health_bioinformatics/main/getting_started/terra/</loc>
-         <lastmod>2024-12-16</lastmod>
+         <lastmod>2024-12-17</lastmod>
     </url>
     <url>
          <loc>https://theiagen.github.io/public_health_bioinformatics/main/workflows/data_export/concatenate_column_content/</loc>
-         <lastmod>2024-12-16</lastmod>
+         <lastmod>2024-12-17</lastmod>
     </url>
     <url>
          <loc>https://theiagen.github.io/public_health_bioinformatics/main/workflows/data_export/transfer_column_content/</loc>
-         <lastmod>2024-12-16</lastmod>
+         <lastmod>2024-12-17</lastmod>
     </url>
     <url>
          <loc>https://theiagen.github.io/public_health_bioinformatics/main/workflows/data_export/zip_column_content/</loc>
-         <lastmod>2024-12-16</lastmod>
+         <lastmod>2024-12-17</lastmod>
     </url>
     <url>
          <loc>https://theiagen.github.io/public_health_bioinformatics/main/workflows/data_import/assembly_fetch/</loc>
-         <lastmod>2024-12-16</lastmod>
+         <lastmod>2024-12-17</lastmod>
     </url>
     <url>
          <loc>https://theiagen.github.io/public_health_bioinformatics/main/workflows/data_import/basespace_fetch/</loc>
-         <lastmod>2024-12-16</lastmod>
+         <lastmod>2024-12-17</lastmod>
     </url>
     <url>
          <loc>https://theiagen.github.io/public_health_bioinformatics/main/workflows/data_import/create_terra_table/</loc>
-         <lastmod>2024-12-16</lastmod>
+         <lastmod>2024-12-17</lastmod>
     </url>
     <url>
          <loc>https://theiagen.github.io/public_health_bioinformatics/main/workflows/data_import/sra_fetch/</loc>
-         <lastmod>2024-12-16</lastmod>
+         <lastmod>2024-12-17</lastmod>
     </url>
     <url>
          <loc>https://theiagen.github.io/public_health_bioinformatics/main/workflows/genomic_characterization/freyja/</loc>
-         <lastmod>2024-12-16</lastmod>
+         <lastmod>2024-12-17</lastmod>
     </url>
     <url>
          <loc>https://theiagen.github.io/public_health_bioinformatics/main/workflows/genomic_characterization/pangolin_update/</loc>
-         <lastmod>2024-12-16</lastmod>
+         <lastmod>2024-12-17</lastmod>
     </url>
     <url>
          <loc>https://theiagen.github.io/public_health_bioinformatics/main/workflows/genomic_characterization/theiacov/</loc>
-         <lastmod>2024-12-16</lastmod>
+         <lastmod>2024-12-17</lastmod>
     </url>
     <url>
          <loc>https://theiagen.github.io/public_health_bioinformatics/main/workflows/genomic_characterization/theiaeuk/</loc>
-         <lastmod>2024-12-16</lastmod>
+         <lastmod>2024-12-17</lastmod>
     </url>
     <url>
          <loc>https://theiagen.github.io/public_health_bioinformatics/main/workflows/genomic_characterization/theiameta/</loc>
-         <lastmod>2024-12-16</lastmod>
+         <lastmod>2024-12-17</lastmod>
     </url>
     <url>
          <loc>https://theiagen.github.io/public_health_bioinformatics/main/workflows/genomic_characterization/theiaprok/</loc>
-         <lastmod>2024-12-16</lastmod>
+         <lastmod>2024-12-17</lastmod>
     </url>
     <url>
          <loc>https://theiagen.github.io/public_health_bioinformatics/main/workflows/genomic_characterization/vadr_update/</loc>
-         <lastmod>2024-12-16</lastmod>
+         <lastmod>2024-12-17</lastmod>
     </url>
     <url>
          <loc>https://theiagen.github.io/public_health_bioinformatics/main/workflows/phylogenetic_construction/augur/</loc>
-         <lastmod>2024-12-16</lastmod>
+         <lastmod>2024-12-17</lastmod>
     </url>
     <url>
          <loc>https://theiagen.github.io/public_health_bioinformatics/main/workflows/phylogenetic_construction/core_gene_snp/</loc>
-         <lastmod>2024-12-16</lastmod>
+         <lastmod>2024-12-17</lastmod>
     </url>
     <url>
          <loc>https://theiagen.github.io/public_health_bioinformatics/main/workflows/phylogenetic_construction/czgenepi_prep/</loc>
-         <lastmod>2024-12-16</lastmod>
+         <lastmod>2024-12-17</lastmod>
     </url>
     <url>
          <loc>https://theiagen.github.io/public_health_bioinformatics/main/workflows/phylogenetic_construction/find_shared_variants/</loc>
-         <lastmod>2024-12-16</lastmod>
+         <lastmod>2024-12-17</lastmod>
     </url>
     <url>
          <loc>https://theiagen.github.io/public_health_bioinformatics/main/workflows/phylogenetic_construction/ksnp3/</loc>
-         <lastmod>2024-12-16</lastmod>
+         <lastmod>2024-12-17</lastmod>
     </url>
     <url>
          <loc>https://theiagen.github.io/public_health_bioinformatics/main/workflows/phylogenetic_construction/lyve_set/</loc>
-         <lastmod>2024-12-16</lastmod>
+         <lastmod>2024-12-17</lastmod>
     </url>
     <url>
          <loc>https://theiagen.github.io/public_health_bioinformatics/main/workflows/phylogenetic_construction/mashtree_fasta/</loc>
-         <lastmod>2024-12-16</lastmod>
+         <lastmod>2024-12-17</lastmod>
     </url>
     <url>
          <loc>https://theiagen.github.io/public_health_bioinformatics/main/workflows/phylogenetic_construction/snippy_streamline/</loc>
-         <lastmod>2024-12-16</lastmod>
+         <lastmod>2024-12-17</lastmod>
     </url>
     <url>
          <loc>https://theiagen.github.io/public_health_bioinformatics/main/workflows/phylogenetic_construction/snippy_streamline_fasta/</loc>
-         <lastmod>2024-12-16</lastmod>
+         <lastmod>2024-12-17</lastmod>
     </url>
     <url>
          <loc>https://theiagen.github.io/public_health_bioinformatics/main/workflows/phylogenetic_construction/snippy_tree/</loc>
-         <lastmod>2024-12-16</lastmod>
+         <lastmod>2024-12-17</lastmod>
     </url>
     <url>
          <loc>https://theiagen.github.io/public_health_bioinformatics/main/workflows/phylogenetic_construction/snippy_variants/</loc>
-         <lastmod>2024-12-16</lastmod>
+         <lastmod>2024-12-17</lastmod>
     </url>
     <url>
          <loc>https://theiagen.github.io/public_health_bioinformatics/main/workflows/phylogenetic_placement/samples_to_ref_tree/</loc>
-         <lastmod>2024-12-16</lastmod>
+         <lastmod>2024-12-17</lastmod>
     </url>
     <url>
          <loc>https://theiagen.github.io/public_health_bioinformatics/main/workflows/phylogenetic_placement/usher/</loc>
-         <lastmod>2024-12-16</lastmod>
+         <lastmod>2024-12-17</lastmod>
     </url>
     <url>
          <loc>https://theiagen.github.io/public_health_bioinformatics/main/workflows/public_data_sharing/fetch_srr_accession/</loc>
-         <lastmod>2024-12-16</lastmod>
+         <lastmod>2024-12-17</lastmod>
     </url>
     <url>
          <loc>https://theiagen.github.io/public_health_bioinformatics/main/workflows/public_data_sharing/mercury_prep_n_batch/</loc>
-         <lastmod>2024-12-16</lastmod>
+         <lastmod>2024-12-17</lastmod>
     </url>
     <url>
          <loc>https://theiagen.github.io/public_health_bioinformatics/main/workflows/public_data_sharing/terra_2_gisaid/</loc>
-         <lastmod>2024-12-16</lastmod>
+         <lastmod>2024-12-17</lastmod>
     </url>
     <url>
          <loc>https://theiagen.github.io/public_health_bioinformatics/main/workflows/public_data_sharing/terra_2_ncbi/</loc>
-         <lastmod>2024-12-16</lastmod>
+         <lastmod>2024-12-17</lastmod>
     </url>
     <url>
          <loc>https://theiagen.github.io/public_health_bioinformatics/main/workflows/standalone/cauris_cladetyper/</loc>
-         <lastmod>2024-12-16</lastmod>
+         <lastmod>2024-12-17</lastmod>
     </url>
     <url>
          <loc>https://theiagen.github.io/public_health_bioinformatics/main/workflows/standalone/concatenate_illumina_lanes/</loc>
-         <lastmod>2024-12-16</lastmod>
+         <lastmod>2024-12-17</lastmod>
     </url>
     <url>
          <loc>https://theiagen.github.io/public_health_bioinformatics/main/workflows/standalone/gambit_query/</loc>
-         <lastmod>2024-12-16</lastmod>
+         <lastmod>2024-12-17</lastmod>
     </url>
     <url>
          <loc>https://theiagen.github.io/public_health_bioinformatics/main/workflows/standalone/kraken2/</loc>
-         <lastmod>2024-12-16</lastmod>
+         <lastmod>2024-12-17</lastmod>
     </url>
     <url>
          <loc>https://theiagen.github.io/public_health_bioinformatics/main/workflows/standalone/ncbi_amrfinderplus/</loc>
-         <lastmod>2024-12-16</lastmod>
+         <lastmod>2024-12-17</lastmod>
     </url>
     <url>
          <loc>https://theiagen.github.io/public_health_bioinformatics/main/workflows/standalone/ncbi_scrub/</loc>
-         <lastmod>2024-12-16</lastmod>
+         <lastmod>2024-12-17</lastmod>
     </url>
     <url>
          <loc>https://theiagen.github.io/public_health_bioinformatics/main/workflows/standalone/rasusa/</loc>
-         <lastmod>2024-12-16</lastmod>
+         <lastmod>2024-12-17</lastmod>
     </url>
     <url>
          <loc>https://theiagen.github.io/public_health_bioinformatics/main/workflows/standalone/rename_fastq/</loc>
-         <lastmod>2024-12-16</lastmod>
+         <lastmod>2024-12-17</lastmod>
     </url>
     <url>
          <loc>https://theiagen.github.io/public_health_bioinformatics/main/workflows/standalone/tbprofiler_tngs/</loc>
-         <lastmod>2024-12-16</lastmod>
+         <lastmod>2024-12-17</lastmod>
     </url>
     <url>
          <loc>https://theiagen.github.io/public_health_bioinformatics/main/workflows/standalone/theiavalidate/</loc>
-         <lastmod>2024-12-16</lastmod>
+         <lastmod>2024-12-17</lastmod>
     </url>
     <url>
          <loc>https://theiagen.github.io/public_health_bioinformatics/main/workflows_overview/workflows_alphabetically/</loc>
-         <lastmod>2024-12-16</lastmod>
+         <lastmod>2024-12-17</lastmod>
     </url>
     <url>
          <loc>https://theiagen.github.io/public_health_bioinformatics/main/workflows_overview/workflows_kingdom/</loc>
-         <lastmod>2024-12-16</lastmod>
+         <lastmod>2024-12-17</lastmod>
     </url>
     <url>
          <loc>https://theiagen.github.io/public_health_bioinformatics/main/workflows_overview/workflows_type/</loc>
-         <lastmod>2024-12-16</lastmod>
+         <lastmod>2024-12-17</lastmod>
     </url>
 </urlset>
\ No newline at end of file
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