diff --git a/DESCRIPTION b/DESCRIPTION index 2f432760..ad10d38b 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -1,7 +1,7 @@ Package: dsHelper Type: Package Title: Helper Functions for Use with 'DataSHIELD' -Version: 0.4.17.9000 +Version: 0.4.18 Description: Often we need to automate things with 'DataSHIELD'. These functions help to do that. Authors@R: c(person(given= "Tim", diff --git a/NEWS.md b/NEWS.md index 719aff59..ad6d5a02 100644 --- a/NEWS.md +++ b/NEWS.md @@ -1,4 +1,4 @@ -# dsHelper (development version) +# dsHelper 0.4.18 # dsHelper 0.4.17 diff --git a/docs/404.html b/docs/404.html index 8f6cd4cf..43045b4a 100644 --- a/docs/404.html +++ b/docs/404.html @@ -32,7 +32,7 @@
@@ -106,7 +106,7 @@Site built with pkgdown 2.0.4.
+Site built with pkgdown 2.0.5.
diff --git a/docs/articles/TROUBLESHOOTING.html b/docs/articles/TROUBLESHOOTING.html index ecdab7a4..1c5ddac7 100644 --- a/docs/articles/TROUBLESHOOTING.html +++ b/docs/articles/TROUBLESHOOTING.html @@ -33,7 +33,7 @@ @@ -113,11 +113,11 @@If you get an error when trying to install tidyr, run the following lines of code:
-remove.packages("tidyr")
-remove.packages("cpp11")
-library(remotes)
-install_github('r-lib/cpp11', ref = 'v0.1.0')
-install_github('tidyverse/tidyr', ref = 'v1.1.0')
remove.packages("tidyr")
+remove.packages("cpp11")
+library(remotes)
+install_github('r-lib/cpp11', ref = 'v0.1.0')
+install_github('tidyverse/tidyr', ref = 'v1.1.0')
@@ -139,7 +139,7 @@ Site built with pkgdown 2.0.4.
+Site built with pkgdown 2.0.5.
diff --git a/docs/articles/index.html b/docs/articles/index.html index 090fe50d..2e1da4b4 100644 --- a/docs/articles/index.html +++ b/docs/articles/index.html @@ -17,7 +17,7 @@ @@ -82,7 +82,7 @@You can install the package by running the following command in R Studio:
First you need some prerequisites:
-install.packages("remotes")
-library(remotes)
install.packages("remotes")
+library(remotes)
Now to install the package and use the package:
-install_github("lifecycle-project/ds-helper")
-library(dsHelper)
install_github("lifecycle-project/ds-helper")
+library(dsHelper)
dh.anyData(df = NULL, vars = NULL, conns = NULL, checks = TRUE)
dh.anyData(df = NULL, vars = NULL, conns = NULL, checks = TRUE)
dh.classDiscrepancy(df = NULL, vars = NULL, conns = NULL, checks = TRUE)
dh.classDiscrepancy(df = NULL, vars = NULL, conns = NULL, checks = TRUE)
dh.defineCases(
- df = NULL,
- vars = NULL,
- type = NULL,
- new_obj = NULL,
- conns = NULL,
- checks = FALSE,
- newobj = NULL
-)
dh.defineCases(
+ df = NULL,
+ vars = NULL,
+ type = NULL,
+ new_obj = NULL,
+ conns = NULL,
+ checks = FALSE,
+ newobj = NULL
+)
dh.dropCols(
- df = NULL,
- vars = NULL,
- new_obj = df,
- type = NULL,
- conns = NULL,
- checks = TRUE,
- new_df_name = NULL
-)
dh.dropCols(
+ df = NULL,
+ vars = NULL,
+ new_obj = df,
+ type = NULL,
+ conns = NULL,
+ checks = TRUE,
+ new_df_name = NULL
+)
dh.findVarsIndex(df = NULL, vars = NULL, conns = NULL, checks = TRUE)
dh.findVarsIndex(df = NULL, vars = NULL, conns = NULL, checks = TRUE)
dh.getAnonPlotData(
- df = NULL,
- var_1 = NULL,
- var_2 = NULL,
- conns = NULL,
- checks = TRUE
-)
dh.getAnonPlotData(
+ df = NULL,
+ var_1 = NULL,
+ var_2 = NULL,
+ conns = NULL,
+ checks = TRUE
+)
dh.getStats(df = NULL, vars = NULL, digits = 2, conns = NULL, checks = TRUE)
dh.getStats(df = NULL, vars = NULL, digits = 2, conns = NULL, checks = TRUE)
dh.lmTab(
- model = NULL,
- type = NULL,
- coh_names = NULL,
- direction = NULL,
- ci_format = NULL,
- family = "gaussian",
- digits = 2,
- round_digits = 2,
- exp = FALSE
-)
dh.lmTab(
+ model = NULL,
+ type = NULL,
+ coh_names = NULL,
+ direction = NULL,
+ ci_format = NULL,
+ family = "gaussian",
+ digits = 2,
+ round_digits = 2,
+ exp = FALSE
+)
dh.lmeMultPoly(
- df = NULL,
- formulae = NULL,
- poly_names = NULL,
- conns = NULL,
- checks = TRUE
-)
dh.lmeMultPoly(
+ df = NULL,
+ formulae = NULL,
+ poly_names = NULL,
+ conns = NULL,
+ checks = TRUE
+)
dh.localProxy(df = NULL, conns = NULL, checks = TRUE)
dh.localProxy(df = NULL, conns = NULL, checks = TRUE)
dh.makeIQR(
- df = NULL,
- vars = NULL,
- type = c("combine", "split"),
- new_obj = df,
- conns = NULL,
- checks = TRUE,
- new_df_name = NULL
-)
dh.makeIQR(
+ df = NULL,
+ vars = NULL,
+ type = c("combine", "split"),
+ new_obj = df,
+ conns = NULL,
+ checks = TRUE,
+ new_df_name = NULL
+)
dh.makeLmerForm(
- outcome = NULL,
- id_var = NULL,
- age_vars = NULL,
- random = NULL,
- fixed = NULL,
- age_interactions = FALSE
-)
dh.makeLmerForm(
+ outcome = NULL,
+ id_var = NULL,
+ age_vars = NULL,
+ random = NULL,
+ fixed = NULL,
+ age_interactions = FALSE
+)
dh.makeOutcome(
- df = NULL,
- outcome = NULL,
- age_var = NULL,
- bands = NULL,
- mult_action = NULL,
- mult_vals = NULL,
- df_name = NULL,
- id_var = "child_id",
- band_action = NULL,
- keep_original = NULL,
- conns = NULL
-)
dh.makeOutcome(
+ df = NULL,
+ outcome = NULL,
+ age_var = NULL,
+ bands = NULL,
+ mult_action = NULL,
+ mult_vals = NULL,
+ df_name = NULL,
+ id_var = "child_id",
+ band_action = NULL,
+ keep_original = NULL,
+ conns = NULL
+)
dh.meanByAge(
- df = NULL,
- outcome = NULL,
- age_var = NULL,
- intervals = NULL,
- conns = NULL,
- checks = FALSE
-)
dh.meanByAge(
+ df = NULL,
+ outcome = NULL,
+ age_var = NULL,
+ intervals = NULL,
+ conns = NULL,
+ checks = FALSE
+)
metafor
- dh.metaManual(model = NULL, method = "ML")
+ dh.metaManual(model = NULL, method = "ML")
@@ -116,7 +116,7 @@ Details
diff --git a/docs/reference/dh.predictLmer.html b/docs/reference/dh.predictLmer.html
index bc957980..390bd87d 100644
--- a/docs/reference/dh.predictLmer.html
+++ b/docs/reference/dh.predictLmer.html
@@ -20,7 +20,7 @@
@@ -75,7 +75,7 @@ Gets predicted values based on a new dataframe for lmer models
- dh.predictLmer(model = NULL, new_data = NULL, coh_names = NULL, newdata = NULL)
+ dh.predictLmer(model = NULL, new_data = NULL, coh_names = NULL, newdata = NULL)
@@ -128,7 +128,7 @@ See also
diff --git a/docs/reference/dh.renameVars.html b/docs/reference/dh.renameVars.html
index b529a88d..51d01b24 100644
--- a/docs/reference/dh.renameVars.html
+++ b/docs/reference/dh.renameVars.html
@@ -18,7 +18,7 @@
@@ -71,13 +71,13 @@ Rename one or more columns within a serverside data frame
- dh.renameVars(
- df = NULL,
- current_names = NULL,
- new_names,
- conns = NULL,
- checks = TRUE
-)
+ dh.renameVars(
+ df = NULL,
+ current_names = NULL,
+ new_names,
+ conns = NULL,
+ checks = TRUE
+)
@@ -134,7 +134,7 @@ See also
diff --git a/docs/reference/dh.subjHasData.html b/docs/reference/dh.subjHasData.html
index 48c0106a..0bc609a4 100644
--- a/docs/reference/dh.subjHasData.html
+++ b/docs/reference/dh.subjHasData.html
@@ -17,7 +17,7 @@
@@ -69,7 +69,7 @@ This was an old version of dh.defineCases which is now defunct
- dh.subjHasData()
+ dh.subjHasData()
@@ -85,7 +85,7 @@ This was an old version of dh.defineCases which is now defunct
diff --git a/docs/reference/dh.tidyEnv.html b/docs/reference/dh.tidyEnv.html
index 4f328e12..d8667d07 100644
--- a/docs/reference/dh.tidyEnv.html
+++ b/docs/reference/dh.tidyEnv.html
@@ -18,7 +18,7 @@
@@ -71,7 +71,7 @@ Remove multiple objects from the serverside environment
- dh.tidyEnv(obj = NULL, type = NULL, conns = NULL)
+ dh.tidyEnv(obj = NULL, type = NULL, conns = NULL)
@@ -118,7 +118,7 @@ See also
diff --git a/docs/reference/dh.trimPredData.html b/docs/reference/dh.trimPredData.html
index a3147a32..83e7a64f 100644
--- a/docs/reference/dh.trimPredData.html
+++ b/docs/reference/dh.trimPredData.html
@@ -21,7 +21,7 @@
@@ -77,13 +77,13 @@ Trims predicted values based on min and max values provided
- dh.trimPredData(
- pred = NULL,
- coh_names = NULL,
- age = "age",
- min = NULL,
- max = NULL
-)
+ dh.trimPredData(
+ pred = NULL,
+ coh_names = NULL,
+ age = "age",
+ min = NULL,
+ max = NULL
+)
@@ -139,7 +139,7 @@ See also
diff --git a/docs/reference/dot-onLoad.html b/docs/reference/dot-onLoad.html
index f28076de..23d18c68 100644
--- a/docs/reference/dot-onLoad.html
+++ b/docs/reference/dot-onLoad.html
@@ -17,7 +17,7 @@
@@ -69,7 +69,7 @@ Initialization functions to do init actions
- .onLoad(libname, pkgname)
+ .onLoad(libname, pkgname)
@@ -95,7 +95,7 @@ Arguments
diff --git a/docs/reference/index.html b/docs/reference/index.html
index 0bc95995..36dce5ce 100644
--- a/docs/reference/index.html
+++ b/docs/reference/index.html
@@ -17,7 +17,7 @@
@@ -185,7 +185,7 @@ All functions