bibliobackup2.bib

@PhdThesis{these,
title = {Simulation of Polymer Translocation},
author = {Henk Vocks},
school = {Utrecht Universiteit},
year = {2008},
OPTmonth = {july},
}

@article{kasianowicz,
author = {Kasianowicz, John J. and Brandin, Eric and Branton, Daniel and Deamer, David W.}, 
title = {Characterization of individual polynucleotide molecules using a membrane channel}, 
year = {1996}, 
URL = {http://www.pnas.org/content/93/24/13770.abstract}, 
eprint = {http://www.pnas.org/content/93/24/13770.full.pdf+html}, 
journal = {Proceedings of the National Academy of Sciences} 
}

@article{graph,
author = {Novoselov, K. S. and Geim, A. K. and Morozov, S. V. and Jiang, D. and Zhang, Y. and Dubonos, S. V. and Grigorieva, I. V. and Firsov, A. A.}, 
title = {Electric Field Effect in Atomically Thin Carbon Films}, 
year = {2004}, 
doi = {10.1126/science.1102896}, 
abstract ={We describe monocrystalline graphitic films, which are a few atoms thick but are nonetheless stable under ambient conditions, metallic, and of remarkably high quality. The films are found to be a two-dimensional semimetal with a tiny overlap between valence and conductance bands, and they exhibit a strong ambipolar electric field effect such that electrons and holes in concentrations up to 1013 per square centimeter and with room-temperature mobilities of ∼10,000 square centimeters per volt-second can be induced by applying gate voltage.}, 
URL = {http://www.sciencemag.org/content/306/5696/666.abstract}, 
eprint = {http://www.sciencemag.org/content/306/5696/666.full.pdf}, 
journal = {Science} 
}

@article{dnatrans,
author = {Merchant, Christopher A. and Healy, Ken and Wanunu, Meni and Ray, Vishva and Peterman, Neil and Bartel, John and Fischbein, Michael D. and Venta, Kimberly and Luo, Zhengtang and Johnson, A. T. Charlie and Drndić, Marija},
title = {DNA Translocation through Graphene Nanopores},
journal = {Nano Letters},
year = {2010},
doi = {10.1021/nl101046t},

URL = {http://pubs.acs.org/doi/abs/10.1021/nl101046t},
eprint = {http://pubs.acs.org/doi/pdf/10.1021/nl101046t}
}

	
@article{milchev,
  author={Andrey Milchev},
  title={Single-polymer dynamics under constraints: scaling theory and computer experiment},
  journal={Journal of Physics: Condensed Matter},
    url={http://stacks.iop.org/0953-8984/23/i=10/a=103101},
  year={2011},
}

@article{keyser,
author = {Ulrich F. Keyser}, 
title = {Controlling molecular transport through nanopores}, 
year = {2011}, 
doi = {10.1098/rsif.2011.0222},  
url = {http://rsif.royalsocietypublishing.org/content/early/2011/06/22/rsif.2011.0222.abstract}, 
eprint = {http://rsif.royalsocietypublishing.org/content/early/2011/06/22/rsif.2011.0222.full.pdf+html}, 
journal = {Journal of The Royal Society Interface} 
}


@article{sung,
  volume = {77},
  journal = {Physical Review Letters},
  author = {Sung, W. and Park, P. J.},
  url = {http://link.aps.org/doi/10.1103/PhysRevLett.77.783},
  doi = {10.1103/PhysRevLett.77.783},
  year = {1996},
  title = {Polymer Translocation through a Pore in a Membrane},
  issue = {4},
  publisher = {American Physical Society},
}

@article{storm,
author = {Storm, Arnold J. and Storm, Cornelis and Chen, Jianghua and Zandbergen, Henny and Joanny, Jean-François and Dekker, Cees},
title = {Fast DNA Translocation through a Solid-State Nanopore},
journal = {Nano Letters},
year = {2005},
doi = {10.1021/nl048030d},

URL = {http://pubs.acs.org/doi/abs/10.1021/nl048030d},
eprint = {http://pubs.acs.org/doi/pdf/10.1021/nl048030d}
}

@article{jchem,
author = {Margaret C. Linak and Richard Tourdot and Kevin D. Dorfman},
collaboration = {},
title = {Moving beyond Watson--Crick models of coarse grained DNA dynamics},
publisher = {AIP},
year = {2011},
journal = {The Journal of Chemical Physics},
keywords = {bonds (chemical); DNA; molecular biophysics; molecular configurations},
url = {http://link.aip.org/link/?JCP/135/205102/1},
doi = {10.1063/1.3662137}
}

@article{ holesedge,
Author = {Bayley, Hagan},
Title = {{Nanotechnology: Holes with an edge}},
Journal = {{Nature}},
Year = {{2010}},
ISSN = {{0028-0836}},
Unique-ID = {{ISI:000282273100028}},
}

@article{graph,
author = {Schneider, Grégory F. and Kowalczyk, Stefan W. and Calado, Victor E. and Pandraud, Grégory and Zandbergen, Henny W. and Vandersypen, Lieven M. K. and Dekker, Cees},
title = {DNA Translocation through Graphene Nanopores},
journal = {Nano Letters},
year = {2010},
doi = {10.1021/nl102069z},

URL = {http://pubs.acs.org/doi/abs/10.1021/nl102069z},
eprint = {http://pubs.acs.org/doi/pdf/10.1021/nl102069z}
}

@article{doublebrin,
author = {Sathe, Chaitanya and Zou, Xueqing and Leburton, Jean-Pierre and Schulten, Klaus},
title = {Computational Investigation of DNA Detection Using Graphene Nanopores},
journal = {ACS Nano},
year = {2011},
doi = {10.1021/nn202989w},

URL = {http://pubs.acs.org/doi/abs/10.1021/nn202989w},
eprint = {http://pubs.acs.org/doi/pdf/10.1021/nn202989w}
}

@article{lammps,
title = "Fast Parallel Algorithms for Short-Range Molecular Dynamics",
journal = "Journal of Computational Physics",
year = "1995",
note = "",
issn = "0021-9991",
doi = "10.1006/jcph.1995.1039",
url = "http://www.sciencedirect.com/science/article/pii/S002199918571039X",
author = "Steve Plimpton"
}

@article{traction,
  title = {Forced translocation of a polymer: Dynamical scaling versus molecular dynamics simulation},
  author = {Dubbeldam, J. L. A. and Rostiashvili, V. G. and Milchev, A. and Vilgis, T. A.},
  journal = {Physical Review E},
  year = {2012},
  doi = {10.1103/PhysRevE.85.041801},
  url = {http://link.aps.org/doi/10.1103/PhysRevE.85.041801},
  publisher = {American Physical Society}
}