tirohia / timecourseR Public

Systems biology timecourse experiment; Host:pathogen interaction

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Name		Name	Last commit message	Last commit date
Latest commit History 23 Commits
.gitignore		.gitignore
EBSeqHMM.R		EBSeqHMM.R
GeneSetComparison_multiple_plot_pdf.R		GeneSetComparison_multiple_plot_pdf.R
R.Rproj		R.Rproj
README.md		README.md
RTN.R		RTN.R
Rnits.R		Rnits.R
TDAracne.R		TDAracne.R
backup-050115deseq2TC.R		backup-050115deseq2TC.R
betr.R		betr.R
bhc.R		bhc.R
correlation.R		correlation.R
cycle.R		cycle.R
deseq2TC.R		deseq2TC.R
deseq2TCBackup140215.R		deseq2TCBackup140215.R
edgeR.R		edgeR.R
grenits.R		grenits.R
heteroscedacity.R		heteroscedacity.R
housekeeping.R		housekeeping.R
intersection.R		intersection.R
kmeans.R		kmeans.R
matrix.cov.R		matrix.cov.R
minet.R		minet.R
nailTest.R		nailTest.R
nexus.R		nexus.R
permute_to_calc_emp-_p_value for lista.R		permute_to_calc_emp-_p_value for lista.R
plotGeneTimeline.R		plotGeneTimeline.R
plotProfile.R		plotProfile.R
principleComponentAnalysis.R		principleComponentAnalysis.R
psaCode.R		psaCode.R
psaGenesRPM.R		psaGenesRPM.R
quantileNotrmailzation.R		quantileNotrmailzation.R
rpmk-ify.R		rpmk-ify.R
scatterPlot.R		scatterPlot.R
shipToCytoscape.R		shipToCytoscape.R
simulatedData.R		simulatedData.R
timecourse.R		timecourse.R
timecourseTest.R		timecourseTest.R
toCytoscape.R		toCytoscape.R
tools.R		tools.R
trimming.R		trimming.R
voomlimma.R		voomlimma.R