remove install references to biopython (which is not used)

tkzeng · Jun 17, 2024 · 6b3227f · 6b3227f
1 parent 5cf94b8
commit 6b3227f
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Showing 2 changed files with 3 additions and 3 deletions.
diff --git a/PangolinColab.ipynb b/PangolinColab.ipynb
@@ -50,7 +50,7 @@
         "id": "NpEQ3rtI9BI6"
       },
       "source": [
-        "!pip install pyvcf gffutils biopython pandas pyfastx\n",
+        "!pip install pyvcf gffutils pandas pyfastx\n",
         "!git clone https://github.com/tkzeng/Pangolin.git\n",
         "%cd Pangolin\n",
         "!pip install .\n",
@@ -139,4 +139,4 @@
       "outputs": []
     }
   ]
-}
+}
diff --git a/README.md b/README.md
@@ -13,7 +13,7 @@ See below for information on usage and local installation.
 * Install other dependencies:
   ```
   conda install -c conda-forge pyvcf
-  pip install gffutils biopython pandas pyfastx
+  pip install gffutils pandas pyfastx
   ```
 * Install Pangolin:
   ```