From f7200d606822876443afaf0d900d85f073b49754 Mon Sep 17 00:00:00 2001 From: Elizabeth Wenk Date: Tue, 26 May 2020 15:52:09 +1000 Subject: [PATCH] various small changes --- config/definitions.yml | 13 ++++++++- config/species_list.csv | 51 ++++++++++++++++++++++++++++++++++ data/Barlow_1981/metadata.yml | 34 +++++++++++------------ data/Moore_2019_2/metadata.yml | 8 +++++- 4 files changed, 87 insertions(+), 19 deletions(-) diff --git a/config/definitions.yml b/config/definitions.yml index aa2d20449..3fdb98bc9 100644 --- a/config/definitions.yml +++ b/config/definitions.yml @@ -487,6 +487,7 @@ traits: ballistic: Seeds are launched away from the plant by explosion as soon as the seed capsule opens; true dispersal syndrome barochory: Seeds are dispersed without assistance; true dispersal syndrome barochory_small_seeds: Small seeds (<0.1 mg) that are dispersed without assistance; true dispersal syndrome + bird: Seed dispersed by birds chamaechory: diaspore is rolled along ground surface by wind dyszoochory: diaspore is eaten intentionally by an animal elaiosome: Fleshy (often fatty) appendage on seeds that attracts ants; dispersal appendage @@ -494,9 +495,13 @@ traits: exozoochory: When seeds are dispersed on the surface of an animal; will overlap significantly with the terms adhesion and animal_vector fleshy_fruit: A fruit where part or all of the pericarp (fruit wall) is fleshy at maturity; fruit type fleshy_wings_capsule: A fruit whose capsule or wings are fleshy + gravity: hydrochory: Dispersal on the surface of water; see also the term water; true dispersal syndrome insect: Dispersal by ant or termite + invertebrate: Dispersal by invertebrate other than insects + mammal: Dispersed by mammals by unspecified mechanisms mobile: use 'unassisted' + mud_on_cars: myrmecochory: Dispersules with elaiosomes (specialised nutritious appendages) that make them attractive for capture, transport and use by ants or related insects; true dispersal syndrome nautohydrochory: water; e.g. floating/submerged in fresh/saltwater currents ombrohydrochory: water; diaspore is propelled by action of rain on plant structure/wetting by rain or dew @@ -522,7 +527,9 @@ traits: mammals: mammals non-flying: mammals and non-flying birds (i.e. cassowary) passive: no dispersal agent + vertebrate: vertebrate wind: wind + water: water dormancy_type: description: Classification for seed dormancy type: categorical @@ -2018,13 +2025,15 @@ traits: aquatic_herb: Herb that grows primarily in water aquatic_submerged: Plant where all the leaves are submerged in water climber: Plant that climbs up another plant's trunk, branches, rather than being able to support itself - climber_herb: Herbaceous plant that climbs up another plant; liana + climber_herb: Herbaceous plant that climbs up another plant + climber_liana: Liana (usually refers to a woody climber) climber_palm: Palm that climbs up another plant climber_shrub: Shrubby plant that climbs up another plant climber_scrambler: Plant that climbs by scrambling climber_tree: Tree that climbs up another plant climber_twiner: Climber that ascends by twining (usually will refer to herbaceous climber, but not always) climber_vine: Vine (usually will refer to herbaceous climber, but not always) + climber_vine_woody: Vine whose stem is at least partially woody climber_woody: Woody or thick (>2 cm) climbers with hooks, tendrils, adventitious roots, etc. creeper: Creeper that roots along stems cushion: Plant with tightly packed foliage help close to soil surface, with relatively even and rounded canopy boundary; a sub-category of herb in Cornellison, but possibly used for subshrubs as well by some @@ -2033,6 +2042,7 @@ traits: epiphyte_herb: Herb that grows on top of another plant epiphyte_shrub: Shrub that grows on top of another plant epiphyte_tree: Tree that grows on top of another plant + epiphyte_woody: Woody epiphyte epiphyte_treelet: Tree that grows on top of another plant erect_leafy: Plant essentially erect with leaves concentrated in the middle and/or top parts; a sub-category of herb fern: A group of vascular plants that reproduce via spores @@ -2051,6 +2061,7 @@ traits: pandanus: Pandanus parasite: A plant that derives some or all of its nutritional requirements from another living plant parasite_woody: A woody plant that derives some or all of its nutritional requirements from another living plant + primitive: includes club moss, selaginella prostrate: Plant that lies flat against the ground prostrate_shrub: Woody plant that lies flat against the ground rosette: Herb where the leaves are concentrated right at the ground surface diff --git a/config/species_list.csv b/config/species_list.csv index 2264eef83..58266b210 100644 --- a/config/species_list.csv +++ b/config/species_list.csv @@ -169,6 +169,7 @@ Acacia binervata,Leguminosae,DC.,ild-31497,Accepted,Acacia binervata,2915163,594 Acacia binervia,Leguminosae,(Wendl.) J.F.Macbr.,ild-366,Accepted,Acacia binervia,2905078,59466 Acacia bivenosa,Leguminosae,DC.,ild-31501,Accepted,Acacia bivenosa,2912987,59491 Acacia blakei,Leguminosae,Pedley,ild-49120,Accepted,Acacia blakei,2911387,59527 +Acacia blakei subsp. diphylla,Leguminosae,(Tindale) Pedley,ild-49125,Accepted,unknown,unknown,unknown Acacia blakelyi,Leguminosae,Maiden,ild-47923,Accepted,Acacia blakelyi,2901812,59535 Acacia blaxellii,Leguminosae,Maslin,ild-48348,Accepted,Acacia blaxellii,2895647,133473 Acacia blayana,Leguminosae,Tindale & Court,ild-47404,Accepted,Acacia blayana,2899631,118800 @@ -192,6 +193,7 @@ Acacia burbidgeae,Leguminosae,Pedley,ild-48050,Accepted,Acacia burbidgeae,290362 Acacia burrana,Leguminosae,Pedley,kew-2603357,Unresolved,Acacia burrana,2896819,204387 Acacia burrowii,Leguminosae,Maiden,ild-49117,Accepted,Acacia burrowii,2898960,59904 Acacia buxifolia,Leguminosae,A.Cunn.,ild-31499,Accepted,Acacia buxifolia,2906034,59912 +Acacia buxifolia subsp. pubiflora,Leguminosae,Pedley,ild-47718,Accepted,unknown,unknown,unknown Acacia bynoeana,Leguminosae,Benth.,ild-48563,Accepted,Acacia bynoeana,2897229,59969 Acacia caerulescens,Leguminosae,Maslin & Court,ild-47492,Accepted,Acacia caerulescens,2893725,59987 Acacia caesariata,Leguminosae,R.S.Cowan & Maslin,ild-48521,Accepted,Acacia caesariata,2908040,117996 @@ -668,6 +670,7 @@ Acacia monticola,Leguminosae,J.M.Black,ild-49022,Accepted,Acacia monticola,29102 Acacia mooreana,Leguminosae,W.Fitzg.,ild-48212,Accepted,Acacia mooreana,2915449,66992 Acacia mountfordiae,Leguminosae,Specht,ild-48957,Accepted,Acacia mountfordiae,2886520,67008 Acacia mucronata,Leguminosae,Wendl.,ild-49376,Accepted,Acacia mucronata,2902910,67017 +Acacia mucronata subsp. longifolia,Leguminosae,(Benth.) Court,ild-49383,Accepted,unknown,unknown,unknown Acacia muelleriana,Leguminosae,Maiden & R.T.Baker,ild-47432,Accepted,Acacia muelleriana,2917214,67084 Acacia multisiliqua,Leguminosae,(Benth.) Maconochie,ild-48801,Accepted,Acacia multisiliqua,2906574,67123 Acacia multispicata,Leguminosae,Benth.,ild-49323,Accepted,Acacia multispicata,2910647,67137 @@ -878,6 +881,7 @@ Acacia semitrullata,Leguminosae,Maslin,ild-48227,Accepted,Acacia semitrullata,29 Acacia sericata,Leguminosae,Benth.,ild-48837,Accepted,Acacia sericata,2915320,70186 Acacia sericocarpa,Leguminosae,W.Fitzg.,ild-48375,Accepted,Acacia sericocarpa,2901361,70206 Acacia sericoflora,Leguminosae,Pedley,ild-48930,Accepted,Acacia sericoflora,2902684,70217 +Acacia serpentinicola,Leguminosae,(Maslin) Pedley,tro-100280633,Accepted,unknown,unknown,unknown Acacia sertiformis,Leguminosae,A.Cunn.,ild-47748,Accepted,Acacia sertiformis,2917222,70234 Acacia sessilis,Leguminosae,Benth.,ild-48287,Accepted,Acacia sessilis,2895373,70252 Acacia sessilispica,Leguminosae,Maiden & Blakeley,ild-49320,Accepted,Acacia sessilispica,2914465,70259 @@ -1277,6 +1281,7 @@ Ageratina adenophora,Compositae,(Spreng.) R.M.King & H.Rob.,gcc-122109,Accepted, Ageratina riparia,Compositae,(Regel) R.M.King & H.Rob.,gcc-86968,Accepted,Ageratina riparia,2899012,77909 Ageratum conyzoides,Compositae,(L.) L.,gcc-114457,Accepted,Ageratum conyzoides,2886795,77936 Ageratum houstonianum,Compositae,Mill.,gcc-11706,Accepted,Ageratum houstonianum,2912908,77952 +Agiortia cicatricata,NA,(J.M.Powell) Quinn,kew-2626152,Unresolved,unknown,unknown,unknown Agiortia pedicellata,Ericaceae,(C.T.White) Quinn,kew-2626153,Unresolved,Agiortia pedicellata,2915473,203405 Agiortia pleiosperma,Ericaceae,(F.Muell.) Quinn,kew-2626154,Unresolved,Agiortia pleiosperma,2920987,203406 Aglaia argentea,Meliaceae,Blume,kew-2626182,Accepted,Aglaia argentea,2907697,117155 @@ -2511,6 +2516,7 @@ Baloskion pallens,Restionaceae,(R.Br.) B.G.Briggs & L.A.S.Johnson,kew-221168,Acc Baloskion stenocoleum,Restionaceae,(L.A.S.Johnson & O.D.Evans) B.G.Briggs & L.A.S.Johnson,kew-221169,Accepted,Baloskion stenocoleum,2916332,169673 Baloskion tenuiculme,Restionaceae,(S.T.Blake) B.G.Briggs & L.A.S.Johnson,kew-221170,Accepted,Baloskion tenuiculme,2904591,168298 Baloskion tetraphyllum,Restionaceae,(Labill.) B.G.Briggs & L.A.S.Johnson,kew-221171,Accepted,Baloskion tetraphyllum,2889918,165901 +Baloskion tetraphyllum subsp. meiostachyum,Restionaceae,(L.A.S.Johnson & O.D.Evans) B.G.Briggs & L.A.S.Johnson,kew-221172,Accepted,unknown,unknown,unknown Bambusa arnhemica,Poaceae,F.Muell.,kew-398620,Accepted,Bambusa arnhemica,2894263,105827 Bambusa balcooa,Poaceae,Roxb.,kew-398641,Accepted,unknown,unknown,unknown Bambusa moreheadiana,Poaceae,F.M.Bailey,kew-469195,Accepted,Mullerochloa moreheadiana,8500974,202495 @@ -2806,6 +2812,7 @@ Blechnum camfieldii,Blechnaceae,Tindale,tro-50338230,Unresolved,Blechnum camfiel Blechnum chambersii,Blechnaceae,Tindale,tro-50338232,Unresolved,Blechnum chambersii,2892862,56659 Blechnum fluviatile,Blechnaceae,E.J. Lowe ex Salomon,tro-50338233,Unresolved,Blechnum fluviatile,2894940,56754 Blechnum gregsonii,Blechnaceae,Tindale,tro-50338234,Unresolved,Blechnum gregsonii,2887473,56762 +Blechnum lineare,Blechnaceae,(J. Sm.) Christenh.,tro-50338242,Accepted,unknown,unknown,unknown Blechnum maximum,Blechnaceae,(J. Sm. ex C. Chr.) Christenh.,tro-100374504,Accepted,Doodia maxima,2900543,177958 Blechnum medium,Blechnaceae,(R. Br.) Christenh.,tro-50047295,Accepted,unknown,unknown,unknown Blechnum minus,Blechnaceae,Ettingsh.,tro-26616107,Unresolved,Blechnum minus,2915190,56816 @@ -2886,6 +2893,7 @@ Boronia baeckeacea,Rutaceae,F.Muell.,kew-2679860,Accepted,Boronia baeckeacea,292 Boronia barkeriana,Rutaceae,F.Muell.,kew-2679862,Accepted,Boronia barkeriana,2911104,59443 Boronia barrettiorum,Rutaceae,Duretto,kew-2603839,Accepted,Boronia barrettiorum,2912681,205849 Boronia bipinnata,Rutaceae,Lindl.,kew-2679868,Accepted,Boronia bipinnata,2916238,59459 +Boronia boliviensis,Rutaceae,J.B.Williams & J.T.Hunter,kew-2603840,Accepted,unknown,unknown,unknown Boronia busselliana,Rutaceae,F.Muell.,kew-2679873,Accepted,Boronia busselliana,2913601,59502 Boronia capitata,Rutaceae,Benth.,kew-2679876,Accepted,Boronia capitata,2893283,59537 Boronia chartacea,Rutaceae,P.H.Weston,kew-2679879,Accepted,Boronia chartacea,2890305,118805 @@ -3139,6 +3147,7 @@ Brachypodium distachyon,Poaceae,(L.) P.Beauv.,kew-399871,Accepted,Brachypodium d Brachyscias verecundus,Apiaceae,J.M.Hart & Henwood,kew-2681352,Accepted,Brachyscias verecundus,2888419,166813 Brachyscome aculeata,Compositae,(Labill.) Cass. ex Less.,gcc-80635,Accepted,Brachyscome aculeata,2911061,64644 Brachyscome angustifolia,Compositae,A.Cunn. ex DC.,gcc-46499,Accepted,unknown,unknown,unknown +Brachyscome angustifolia var. heterophylla,Compositae,(Benth.) C.Davis,gcc-60231,Accepted,unknown,unknown,unknown Brachyscome basaltica,Compositae,F.Muell.,gcc-76562,Accepted,Brachyscome basaltica,2899986,64693 Brachyscome bellidioides,Compositae,Steetz,gcc-83090,Accepted,Brachyscome bellidioides,2911349,64721 Brachyscome blackii,Compositae,G.L.Davis,gcc-142030,Accepted,Brachyscome blackii,2914784,64740 @@ -3199,6 +3208,7 @@ Brachyscome stuartii,Compositae,Benth.,gcc-133276,Accepted,Brachyscome stuartii, Brachyscome tadgellii,Compositae,Tovey & P.Morris,gcc-103847,Accepted,Brachyscome tadgellii,2905014,65756 Brachyscome tatei,Compositae,J.M.Black,gcc-141447,Accepted,Brachyscome tatei,2900888,65764 Brachyscome tenuiscapa,Compositae,Hook.f.,gcc-143809,Accepted,Brachyscome tenuiscapa,2906753,65802 +Brachyscome tenuiscapa var. pubescens,Compositae,(Benth.) G.L.Davis,gcc-53499,Accepted,unknown,unknown,unknown Brachyscome tesquorum,Compositae,J.M.Black,gcc-83891,Accepted,Brachyscome tesquorum,2911796,65831 Brachyscome trachycarpa,Compositae,F.Muell.,gcc-101819,Accepted,Brachyscome trachycarpa,2912089,65853 Brachyscome whitei,Compositae,G.L.Davis,gcc-126608,Accepted,Brachyscome whitei,2895721,65899 @@ -3386,6 +3396,7 @@ Caladenia bryceana,Orchidaceae,R.S.Rogers,kew-28472,Accepted,Caladenia bryceana Caladenia busselliana,Orchidaceae,Hopper & A.P.Br.,kew-222780,Accepted,Caladenia busselliana,2905825,182280 Caladenia caesarea,Orchidaceae,(Domin) M.A.Clem. & Hopper,kew-28475,Accepted,Caladenia caesarea subsp. maritima,2919112,182282 Caladenia cairnsiana,Orchidaceae,F.Muell.,kew-28476,Accepted,Caladenia cairnsiana,NA,90748 +Caladenia capillata,Orchidaceae,D.L.Jones,kew-28480,Accepted,unknown,unknown,unknown Caladenia cardiochila,Orchidaceae,Tate,kew-28481,Accepted,Caladenia tessellata,2900910,92495 Caladenia carnea,Orchidaceae,R.Br.,kew-28482,Accepted,Caladenia carnea,2894779,90774 Caladenia carnea sensu Willis (1970),Orchidaceae,R.Br.,kew-28482,Accepted,Caladenia carnea,2894779,90774 @@ -3509,6 +3520,7 @@ Caladenia reticulata,Orchidaceae,Fitzg.,kew-28691,Accepted,Caladenia reticulata, Caladenia rhomboidiformis,Orchidaceae,(E.Coleman) M.A.Clem. & Hopper,kew-28693,Accepted,Caladenia rhomboidiformis,NA,92356 Caladenia rigida,Orchidaceae,R.S.Rogers,kew-28696,Accepted,Caladenia rigida,2914821,92363 Caladenia roei,Orchidaceae,Benth.,kew-28699,Accepted,Caladenia roei,NA,92374 +Caladenia rosella,Orchidaceae,G.W.Carr,kew-28700,Accepted,unknown,unknown,unknown Caladenia saxicola,Orchidaceae,A.P.Br. & G.Brockman,kew-372410,Accepted,Caladenia saxicola,NA,211457 Caladenia serotina,Orchidaceae,Hopper & A.P.Br.,kew-222875,Accepted,Caladenia serotina,NA,129088 Caladenia sigmoidea,Orchidaceae,R.S.Rogers,kew-28708,Accepted,Caladenia sigmoidea,NA,92417 @@ -3521,6 +3533,7 @@ Caladenia tessellata,Orchidaceae,Fitzg.,kew-28720,Accepted,Caladenia tessellata, Caladenia testacea,Orchidaceae,R.Br.,kew-28721,Accepted,Caladenia testacea,NA,92512 Caladenia thinicola,Orchidaceae,Hopper & A.P.Br.,kew-222881,Accepted,Caladenia thinicola,NA,231821 Caladenia tonellii,Orchidaceae,D.L.Jones,kew-28727,Accepted,unknown,unknown,unknown +Caladenia transitoria,Orchidaceae,D.L.Jones,kew-28729,Accepted,unknown,unknown,unknown Caladenia triangularis,Orchidaceae,R.S.Rogers,kew-28730,Accepted,Caladenia x triangularis,NA,174198 Caladenia uliginosa,Orchidaceae,A.S.George,kew-28732,Accepted,Caladenia uliginosa,NA,92609 Caladenia ultima,Orchidaceae,Hopper & A.P.Br.,kew-222886,Accepted,Caladenia ultima,NA,231411 @@ -4091,6 +4104,7 @@ Cassinia denticulata,Compositae,R.Br.,gcc-32149,Accepted,Cassinia denticulata,29 Cassinia diminuta,Compositae,Orchard,gcc-36639,Accepted,Cassinia diminuta,2896152,191721 Cassinia hewsoniae,Compositae,Orchard,gcc-106842,Accepted,Cassinia hewsoniae,2907723,189756 Cassinia laevis,Compositae,R.Br.,gcc-133842,Accepted,Cassinia laevis,2911348,54797 +Cassinia lepschii,Compositae,Orchard,gcc-43342,Accepted,unknown,unknown,unknown Cassinia leptocephala,Compositae,F.Muell.,gcc-9234,Accepted,Cassinia leptocephala,2907023,54813 Cassinia macrocephala,Compositae,Orchard,gcc-4379,Accepted,Cassinia macrocephala,2919715,191724 Cassinia maritima,Compositae,Orchard,gcc-87040,Accepted,Cassinia maritima,2891326,191722 @@ -5015,6 +5029,7 @@ Coronidium elatum,Compositae,(A.Cunn. ex DC.) Paul G.Wilson,gcc-52406,Accepted,u Coronidium elatum subsp. minus,Compositae,(A.Cunn. ex DC.) Paul G.Wilson,gcc-95281,Accepted,unknown,unknown,unknown Coronidium oxylepis subsp. lanatum,Compositae,(F.Muell.) Paul G.Wilson,gcc-33760,Accepted,unknown,unknown,unknown Coronidium scorpioides,Compositae,(Labill.) Paul G.Wilson,gcc-111320,Accepted,unknown,unknown,unknown +Coronidium waddelliae,Compositae,(J.H.Willis) Paul G.Wilson,gcc-82035,Accepted,unknown,unknown,unknown Correa aemula,Rutaceae,(Lindl.) F.Muell.,kew-2738151,Accepted,Correa aemula,7851591,80264 Correa alba,Rutaceae,Andrews,kew-2738153,Accepted,Correa alba,2906721,80283 Correa alba var. alba,Rutaceae,Andrews,kew-2738153,Accepted,Correa alba var. alba,2905055,80299 @@ -5746,6 +5761,7 @@ Cyperus scaber,Cyperaceae,(R.Br.) Boeckeler,kew-238439,Accepted,Cyperus scaber,2 Cyperus scariosus,Cyperaceae,R.Br.,kew-238443,Accepted,Cyperus scariosus,2891944,98944 Cyperus sculptus,Cyperaceae,S.T.Blake,kew-238477,Accepted,Cyperus sculptus,2902340,98972 Cyperus secubans,Cyperaceae,K.L.Wilson,kew-238478,Accepted,Cyperus secubans,2915915,118916 +Cyperus semifertilis,Cyperaceae,S.T.Blake,kew-238488,Accepted,unknown,unknown,unknown Cyperus serotinus,Cyperaceae,Rottb.,kew-238503,Accepted,unknown,unknown,unknown Cyperus sexflorus,Cyperaceae,R.Br.,kew-238544,Accepted,Cyperus sexflorus,2918546,99016 Cyperus sphacelatus,Cyperaceae,Rottb.,kew-238595,Accepted,unknown,unknown,unknown @@ -5952,6 +5968,7 @@ Datura stramonium,Solanaceae,L.,kew-2757848,Accepted,Datura stramonium,2917161,8 Datura wrightii,Solanaceae,Regel,kew-2757870,Accepted,Datura wrightii,2897484,81238 Daucus carota,Apiaceae,L.,kew-2757936,Accepted,Daucus carota,2893559,81289 Daucus glochidiatus,Apiaceae,"(Labill.) Fisch., C.A.Mey. & Avé-Lall.",kew-2758016,Accepted,Daucus glochidiatus,2901796,81304 +Davallia solida var. pyxidata,Davalliaceae,(G. Forst.) Sw.,tro-26605504,Accepted,unknown,unknown,unknown Davidsonia jerseyana,Cunoniaceae,(F.M.Bailey) G.J.Harden & J.B.Williams,kew-56617,Accepted,Davidsonia jerseyana,2918807,166905 Davidsonia johnsonii,Cunoniaceae,J.B.Williams & G.J.Harden,kew-56618,Accepted,Davidsonia johnsonii,2915538,166907 Davidsonia pruriens,Cunoniaceae,F.Muell.,kew-56619,Accepted,Davidsonia pruriens,2888235,81761 @@ -6423,6 +6440,7 @@ Dillwynia hispida,Leguminosae,Lindl.,ild-34428,Accepted,Dillwynia hispida,290294 Dillwynia juniperina,Leguminosae,Lodd.,ild-31346,Accepted,Dillwynia juniperina,2903364,105993 Dillwynia laxiflora,Leguminosae,Benth.,tro-13051435,Unresolved,Dillwynia laxiflora,2892895,106034 Dillwynia oreodoxa,Leguminosae,Blakeley,ild-34271,Accepted,unknown,unknown,unknown +Dillwynia palustris,Leguminosae,Jobson & P.H.Weston,kew-2768414,Unresolved,unknown,unknown,unknown Dillwynia parvifolia,Leguminosae,Sims,ild-35107,Accepted,Dillwynia parvifolia,2914994,106105 Dillwynia phylicoides,Leguminosae,A.Cunn.,ild-34176,Accepted,Dillwynia phylicoides,2915202,106190 Dillwynia prostrata,Leguminosae,Blakeley,ild-34936,Accepted,Dillwynia prostrata,2906430,106250 @@ -6611,6 +6629,7 @@ Diuris corymbosa,Orchidaceae,Lindl.,kew-63387,Accepted,Diuris corymbosa,NA,78933 Diuris disposita,Orchidaceae,D.L.Jones,kew-63394,Accepted,Diuris disposita,NA,117435 Diuris drummondii,Orchidaceae,Lindl.,kew-63395,Accepted,Diuris drummondii,2919908,79071 Diuris emarginata,Orchidaceae,R.Br.,kew-63397,Accepted,Diuris emarginata,NA,79111 +Diuris emarginata var. pauciflora,Orchidaceae,(R.Br.) A.S.George,kew-63434,Accepted,unknown,unknown,unknown Diuris filifolia,Orchidaceae,Lindl.,kew-63402,Accepted,Diuris filifolia,NA,79184 Diuris flavescens,Orchidaceae,D.L.Jones,kew-63403,Accepted,Diuris flavescens,NA,117438 Diuris fragrantissima,Orchidaceae,D.L.Jones & M.A.Clem.,kew-63405,Accepted,Diuris fragrantissima,2921128,79212 @@ -6622,6 +6641,7 @@ Diuris longifolia,Orchidaceae,R.Br.,kew-63415,Accepted,Diuris longifolia,NA,7934 Diuris maculata,Orchidaceae,Sm.,kew-63418,Accepted,Diuris maculata,NA,95722 Diuris magnifica,Orchidaceae,D.L.Jones,kew-63420,Accepted,Diuris magnifica,NA,117444 Diuris micrantha,Orchidaceae,D.L.Jones,kew-63421,Accepted,Diuris micrantha,2895917,117445 +Diuris monticola,Orchidaceae,D.L.Jones,kew-63422,Accepted,unknown,unknown,unknown Diuris nebulosa,Orchidaceae,D.L.Jones,kew-63423,Accepted,Diuris x nebulosa,NA,117446 Diuris ochroma,Orchidaceae,D.L.Jones,kew-63425,Accepted,Diuris ochroma,2914029,137880 Diuris orientis,Orchidaceae,D.L.Jones,kew-63428,Accepted,Diuris orientis,NA,162902 @@ -7896,6 +7916,7 @@ Eriostemon australasius subsp. banksii,Rutaceae,(A.Cunn. ex Endl.) Paul G.Wilson Eriostemon brevifolius,Rutaceae,A.Cunn. ex Endl.,tro-50208639,Accepted,Philotheca brevifolia,2897805,161976 Eriostemon brucei,Rutaceae,F.Muell.,tro-50208752,Accepted,Philotheca brucei,2919752,162029 Eriostemon buxifolius,Rutaceae,Sm.,kew-2797282,Accepted,Philotheca buxifolia,2900503,162037 +Eriostemon buxifolius subsp. obovatus,Rutaceae,(G.Don) Paul G.Wilson,tro-50208767,Accepted,unknown,unknown,unknown Eriostemon coccineus,Rutaceae,C.A.Gardner,tro-50208649,Accepted,Philotheca coccinea,2910471,161977 Eriostemon deserti,Rutaceae,E.Pritz.,tro-50208657,Accepted,Philotheca deserti,2892982,161980 Eriostemon difformis,Rutaceae,A.Cunn. ex Endl.,kew-2797302,Accepted,Philotheca difformis,2897416,161983 @@ -8857,6 +8878,7 @@ Euchilopsis linearis,Leguminosae,(Benth.) F.Muell.,ild-34276,Accepted,Euchilopsi Euchiton collinus,Compositae,Cass.,gcc-134861,Accepted,Euchiton japonicus,2895933,91673 Euchiton ensifer,Compositae,(D.G.Drury) Holub,gcc-5484,Accepted,Euchiton japonicus,2895933,91673 Euchiton involucratus,Compositae,(G.Forst.) Holub,gcc-128563,Accepted,Euchiton involucratus,2894664,91650 +Euchiton limosus,Compositae,(D.G.Drury) Holub,gcc-128453,Accepted,unknown,unknown,unknown Euchiton litticola,Compositae,A.M.Buchanan,gcc-143759,Accepted,unknown,unknown,unknown Euchiton sphaericus,Compositae,(Willd.) Holub,gcc-102529,Accepted,Euchiton sphaericus,2895182,91696 Euchiton traversii,Compositae,(Hook.f.) Holub,gcc-129065,Accepted,Euchiton traversii,2902342,91716 @@ -8970,6 +8992,7 @@ Euphrasia ruptura,Orobanchaceae,W.R. Barker,tro-100335677,Unresolved,Euphrasia r Euphrasia scabra,Orobanchaceae,R. Br.,tro-100335681,Unresolved,Euphrasia scabra,2903366,113207 Euphrasia scabra var. alsa,Orobanchaceae,(F.Muell.) J.H.Willis,tro-29205009,Unresolved,unknown,unknown,unknown Euphrasia semipicta,Orobanchaceae,W.R. Barker,tro-100335688,Unresolved,Euphrasia semipicta,2905452,113330 +Euphrasia speciosa,Orobanchaceae,R.Br.,kew-2803970,Unresolved,unknown,unknown,unknown Eupomatia barbata,Eupomatiaceae,Jessup,kew-2804638,Accepted,Eupomatia barbata,2904444,182256 Eupomatia bennettii,Eupomatiaceae,F.Muell.,kew-2804640,Accepted,Eupomatia bennettii,2905516,113656 Eupomatia bennettii,Eupomatiaceae,F.Muell.,kew-2804640,Accepted,unknown,unknown,unknown @@ -8986,6 +9009,7 @@ Euryomyrtus leptospermoides,Myrtaceae,(C.A.Gardner) Trudgen,kew-82954,Accepted,E Euryomyrtus maidenii,Myrtaceae,(Ewart & Jean White) Trudgen,kew-82955,Accepted,Euryomyrtus maidenii,2900920,170154 Euryomyrtus patrickiae,Myrtaceae,Trudgen,kew-82957,Accepted,Euryomyrtus patrickiae,2906723,170155 Euryomyrtus ramosissima,Myrtaceae,(A.Cunn.) Trudgen,kew-82958,Accepted,Euryomyrtus ramosissima,2912658,170157 +Euryomyrtus ramosissima subsp. prostrata,Myrtaceae,(Hook.f.) Trudgen,kew-82959,Accepted,unknown,unknown,unknown Euryomyrtus recurva,Myrtaceae,Trudgen,kew-82961,Accepted,Euryomyrtus recurva,2917230,170153 Euryops abrotanifolius,Compositae,(L.) DC.,gcc-115108,Accepted,Euryops abrotanifolius,2902411,104190 Euryops chrysanthemoides,Compositae,(DC.) B.Nord.,gcc-13619,Accepted,Euryops chrysanthemoides,2894333,116259 @@ -9585,6 +9609,7 @@ Gentianella barringtonensis,Gentianaceae,(L.G.Adams) Glenny,kew-2718331,Accepted Gentianella bawbawensis,Gentianaceae,(L.G.Adams) Glenny,kew-2821945,Accepted,Gentianella bawbawensis,2913222,200839 Gentianella brevisepala,Gentianaceae,(L.G.Adams) Glenny,kew-2718334,Accepted,unknown,unknown,unknown Gentianella cunninghamii,Gentianaceae,(L.G.Adams) Glenny,kew-2718340,Accepted,unknown,unknown,unknown +Gentianella cunninghamii subsp. cunninghamii,Gentianaceae,(L.G.Adams) Glenny,kew-2822035,Accepted,unknown,unknown,unknown Gentianella demissa,Gentianaceae,(L.G.Adams) Glenny,kew-2718342,Accepted,unknown,unknown,unknown Gentianella diemensis,Gentianaceae,(Griseb.) J.H.Willis,kew-2822057,Accepted,Gentianella diemensis,2917425,80450 Gentianella eichleri,Gentianaceae,(L.G.Adams) Glenny,kew-2822066,Accepted,Gentianella eichleri,2888978,192276 @@ -9770,6 +9795,7 @@ Gompholobium venustum,Leguminosae,R.Br.,ild-34890,Accepted,Gompholobium venustum Gompholobium villosum,Leguminosae,(Meissner) Crisp,ild-35288,Accepted,unknown,unknown,unknown Gompholobium virgatum,Leguminosae,DC.,ild-35012,Accepted,Gompholobium virgatum,2897968,79793 Gompholobium virgatum var. aspalathoides,Leguminosae,DC.,ild-35012,Accepted,unknown,unknown,unknown +Gompholobium virgatum var. emarginatum,Leguminosae,(A. Cunn. ex Benth.) F.M. Bailey,tro-13060692,Accepted,unknown,unknown,unknown Gompholobium viscidulum,Leguminosae,Meissner,ild-35154,Accepted,unknown,unknown,unknown Gomphrena affinis,Amaranthaceae,F.Muell. ex Benth.,kew-2829021,Accepted,Gomphrena affinis,2905260,80055 Gomphrena atrorubra,Amaranthaceae,J.Palmer,kew-2829043,Accepted,Gomphrena atrorubra,2891173,160601 @@ -11270,6 +11296,7 @@ Hernandia bivalvis,Hernandiaceae,Benth.,kew-2846829,Unresolved,Hernandia bivalvi Hernandia nymphaeifolia,Hernandiaceae,(J.Presl) Kubitzki,kew-2846846,Accepted,Hernandia nymphaeifolia,2907963,119124 Hernandia papuana,Hernandiaceae,C.T.White,kew-2846853,Unresolved,NA,NA,NA Herniaria hirsuta,Caryophyllaceae,L.,kew-2846941,Accepted,Herniaria cinerea,2897234,126395 +Herniaria hirsuta subsp. cinerea,Caryophyllaceae,(DC.) Cout.,kew-2846906,Accepted,unknown,unknown,unknown Herpolirion novae-zelandiae,Xanthorrhoeaceae,Hook.f.,kew-277893,Accepted,Herpolirion novae-zelandiae,2893529,93081 Hesperantha falcata,Iridaceae,(L.f.) Ker Gawl.,kew-321263,Accepted,Hesperantha falcata,2891192,93155 Heterachne abortiva,Poaceae,(R.Br.) Druce,kew-418666,Accepted,Heterachne abortiva,2906020,115042 @@ -11572,9 +11599,13 @@ Homalocalyx thryptomenoides,Myrtaceae,(F.Muell.) Craven,kew-99886,Accepted,Homal Homalosciadium homalocarpum,Araliaceae,(F.Muell.) H.Eichler,kew-2852987,Unresolved,Homalosciadium homalocarpum,2898345,103333 Homalospermum firmum,Myrtaceae,Schauer,kew-100119,Accepted,Homalospermum firmum,2896476,103400 Homopholis belsonii,Poaceae,C.E.Hubb.,kew-419160,Accepted,Homopholis belsonii,2912755,103750 +Homoranthus biflorus,Myrtaceae,Craven & S.R.Jones,kew-100136,Accepted,unknown,unknown,unknown +Homoranthus binghiensis,Myrtaceae,J.T.Hunter,kew-334517,Accepted,unknown,unknown,unknown +Homoranthus croftianus,Myrtaceae,J.T.Hunter,kew-100139,Accepted,unknown,unknown,unknown Homoranthus darwinioides,Myrtaceae,(Maiden & Betche) Cheel,kew-100140,Accepted,Homoranthus darwinioides,2892573,103800 Homoranthus flavescens,Myrtaceae,Schauer,kew-100143,Accepted,Homoranthus flavescens,2887522,103838 Homoranthus homoranthoides,Myrtaceae,(F.Muell.) Craven & S.R.Jones,kew-100145,Accepted,Homoranthus homoranthoides,2904641,117557 +Homoranthus lunatus,Myrtaceae,Craven & S.R.Jones,kew-100146,Accepted,unknown,unknown,unknown Homoranthus virgatus,Myrtaceae,A.Cunn. ex Schauer,kew-100154,Accepted,Homoranthus virgatus,2892472,103909 Homoranthus wilhelmii,Myrtaceae,(F.Muell.) Cheel,kew-100155,Accepted,Homoranthus wilhelmii,8485354,103934 Hookerochloa eriopoda,Poaceae,(Vickery) S.W.L.Jacobs,kew-451842,Unresolved,Hookerochloa eriopoda,2888359,215724 @@ -12822,6 +12853,7 @@ Leptospermum petersonii,Myrtaceae,F.M.Bailey,kew-111420,Accepted,Leptospermum pe Leptospermum petraeum,Myrtaceae,Joy Thomps.,kew-111423,Accepted,Leptospermum petraeum,2911479,99825 Leptospermum polyanthum,Myrtaceae,Joy Thomps.,kew-111428,Accepted,Leptospermum polyanthum,2913228,99900 Leptospermum polygalifolium,Myrtaceae,Salisb.,kew-111429,Accepted,Leptospermum polygalifolium,2909048,99912 +Leptospermum polygalifolium subsp. cismontanum,Myrtaceae,Joy Thomps.,kew-111430,Accepted,unknown,unknown,unknown Leptospermum polygalifolium subsp. transmontanum,Myrtaceae,Salisb.,kew-111429,Accepted,unknown,unknown,unknown Leptospermum purpurascens,Myrtaceae,Joy Thomps.,kew-111455,Accepted,Leptospermum purpurascens,2903248,100414 Leptospermum riparium,Myrtaceae,D.I.Morris,kew-111460,Accepted,Leptospermum riparium,2920011,100469 @@ -12868,6 +12900,7 @@ Lepyrodia porterae,Restionaceae,NA,NA,NA,Lepyrodia porterae,2889811,240549 Lepyrodia scariosa,Restionaceae,R.Br.,kew-252373,Accepted,Lepyrodia scariosa,2890381,102604 Lepyrodia sp. A sensu Harden (1993),Restionaceae,NA,NA,NA,Lepyrodia imitans,2915506,240552 Lepyrodia valliculae,Restionaceae,J.M.Black,kew-252380,Accepted,Lepyrodia valliculae,2916167,102717 +Lespedeza cuneata var. cuneata,Leguminosae,NA,ild-39064,Unresolved,unknown,unknown,unknown Lespedeza juncea,Leguminosae,(L.f.) Pers.,ild-33240,Accepted,Lespedeza juncea,2914758,78427 Lespedeza juncea,Leguminosae,(L.f.) Pers.,ild-33240,Accepted,unknown,unknown,unknown Lespedeza juncea,Leguminosae,(L.f.) Pers.,ild-33240,Accepted,unknown,unknown,unknown @@ -14474,6 +14507,7 @@ Myosotis australis,Boraginaceae,R.Br.,kew-2357122,Unresolved,Myosotis australis, Myosotis discolor,Boraginaceae,Pers.,kew-2357600,Accepted,Myosotis discolor,2904550,107342 Myosotis exarrhena,Boraginaceae,F.Muell.,kew-2357409,Unresolved,Myosotis exarrhena,2914800,107352 Myosotis laxa,Boraginaceae,Lehm.,kew-2358174,Accepted,Myosotis laxa,2891377,116549 +Myosotis laxa subsp. caespitosa,Boraginaceae,(Schultz) Hyl. ex Nordh.,kew-2873257,Accepted,unknown,unknown,unknown Myosotis sylvatica,Boraginaceae,Hoffm.,kew-2358257,Accepted,Myosotis sylvatica,2902834,107478 Myosurus australis,Ranunculaceae,F.Muell.,kew-2509072,Unresolved,Myosurus australis,2917549,107500 Myosurus minimus,Ranunculaceae,L.,kew-2509025,Accepted,Myosurus australis,2917549,107500 @@ -15123,6 +15157,7 @@ Ozothamnus ledifolius,Compositae,(DC.) Hook.f.,gcc-36751,Accepted,Ozothamnus led Ozothamnus lepidophyllus,Compositae,(DC.) Steetz,gcc-13871,Accepted,Ozothamnus lepidophyllus,2886565,110381 Ozothamnus lycopodioides,Compositae,Hook.f.,gcc-9793,Accepted,unknown,unknown,unknown Ozothamnus obcordatus,Compositae,DC.,gcc-104477,Accepted,Ozothamnus obcordatus,2901563,110427 +Ozothamnus obcordatus subsp. major,Compositae,(Benth.) P.S.Short,gcc-64601,Accepted,unknown,unknown,unknown Ozothamnus obovatus,Compositae,(DC.) Anderb.,gcc-52170,Accepted,Ozothamnus obovatus,2894271,118628 Ozothamnus occidentalis,Compositae,Anderb.,gcc-39667,Accepted,Ozothamnus occidentalis,2903079,118683 Ozothamnus pholidotus,Compositae,F.Muell.,gcc-12262,Accepted,unknown,unknown,unknown @@ -15777,6 +15812,7 @@ Philotheca ciliata,Rutaceae,Hook.,tro-50208642,Accepted,Philotheca ciliata,28940 Philotheca citrina,Rutaceae,Paul G. Wilson,tro-50208644,Accepted,Philotheca citrina,2904559,118406 Philotheca coateana,Rutaceae,Paul G. Wilson,tro-50208645,Accepted,Philotheca coateana,2890782,159044 Philotheca cymbiformis,Rutaceae,(Paul G. Wilson) Paul G. Wilson,tro-50208654,Accepted,Philotheca cymbiformis,2908433,161978 +Philotheca epilosa,Rutaceae,(Paul G.Wilson) P.I.Forst.,kew-2553727,Unresolved,unknown,unknown,unknown Philotheca eremicola,Rutaceae,Paul G. Wilson,tro-50208691,Accepted,Philotheca eremicola,2913590,161986 Philotheca falcata,Rutaceae,(Paul G.Wilson) Paul G.Wilson,kew-2541776,Accepted,Philotheca falcata,2913108,154744 Philotheca freyciana,Rutaceae,Rozefelds,kew-2541778,Unresolved,Philotheca freyciana,2918209,178898 @@ -15842,6 +15878,7 @@ Phyllanthus lamprophyllus,Phyllanthaceae,Müll.Arg.,kew-154153,Accepted,Phyllant Phyllanthus maderaspatensis,Phyllanthaceae,L.,kew-154278,Accepted,Phyllanthus maderaspatensis,2919355,93689 Phyllanthus microcladus,Phyllanthaceae,Müll.Arg.,kew-154336,Accepted,Phyllanthus microcladus,2920076,93800 Phyllanthus novae-hollandiae,Phyllanthaceae,Müll.Arg.,kew-154486,Accepted,Phyllanthus novae-hollandiae,2890525,94009 +Phyllanthus oblanceolatus,Phyllanthaceae,J.T.Hunter & J.J.Bruhl,kew-154505,Accepted,unknown,unknown,unknown Phyllanthus occidentalis,Phyllanthaceae,J.T.Hunter & J.J.Bruhl,kew-154515,Accepted,unknown,unknown,unknown Phyllanthus praelongipes,Phyllanthaceae,Airy Shaw & G.L.Webster,kew-154695,Accepted,Phyllanthus praelongipes,2893514,94141 Phyllanthus reticulatus,Phyllanthaceae,Poir.,kew-154769,Accepted,Phyllanthus reticulatus,2909644,94297 @@ -16583,6 +16620,7 @@ Potamogeton tepperi,Potamogetonaceae,A.Benn.,kew-308749,Accepted,unknown,unknown Potamogeton tricarinatus,Potamogetonaceae,F.Muell. & A.Benn.,kew-308754,Accepted,Potamogeton tricarinatus,7809707,66667 Potamophila parviflora,Poaceae,R.Br.,kew-438186,Accepted,Potamophila parviflora,2915619,66703 Potentilla anserina,Rosaceae,L.,rjp-724,Accepted,Potentilla anserina,2893485,66742 +Potentilla indica,Rosaceae,(Jacks.) Th.Wolf,rjp-10798,Unresolved,unknown,unknown,unknown Potentilla recta,Rosaceae,L.,rjp-1020,Accepted,Potentilla recta,2896568,80302 Potentilla reptans,Rosaceae,L.,rjp-527,Accepted,Potentilla reptans,2894586,80321 Potentilla supina,Rosaceae,L.,rjp-2038,Accepted,Potentilla supina,2904654,80364 @@ -16641,9 +16679,11 @@ Prasophyllum plumiforme,Orchidaceae,Fitzg.,kew-164794,Accepted,Prasophyllum plum Prasophyllum pruinosum,Orchidaceae,R.S.Rogers,kew-164796,Accepted,unknown,unknown,unknown Prasophyllum pulchellum,Orchidaceae,D.L.Jones,kew-164797,Accepted,unknown,unknown,unknown Prasophyllum regium,Orchidaceae,R.S.Rogers,kew-164801,Accepted,Prasophyllum regium,NA,106157 +Prasophyllum retroflexum,Orchidaceae,D.L.Jones,kew-164803,Accepted,unknown,unknown,unknown Prasophyllum rogersii,Orchidaceae,Rupp,kew-164806,Accepted,Prasophyllum rogersii,NA,NZOR-4-116797 Prasophyllum rostratum,Orchidaceae,Lindl.,kew-164807,Accepted,unknown,unknown,unknown Prasophyllum sargentii,Orchidaceae,(Nicholls) A.S.George,kew-164812,Accepted,Prasophyllum sargentii,NA,106491 +Prasophyllum sphacelatum,Orchidaceae,D.L.Jones,kew-164815,Accepted,unknown,unknown,unknown Prasophyllum striatum,Orchidaceae,R.Br.,kew-164818,Accepted,Prasophyllum striatum,NA,106517 Prasophyllum suaveolens,Orchidaceae,D.L.Jones & R.J.Bates,kew-164819,Accepted,Prasophyllum suaveolens,2899901,138767 Prasophyllum suttonii,Orchidaceae,Ewart & B.Rees,kew-164821,Accepted,Prasophyllum suttonii,NA,NZOR-4-18409 @@ -17241,6 +17281,7 @@ Pycreus sanguinolentus,Cyperaceae,(Vahl) Nees,kew-238418,Accepted,Cyperus sangui Pycreus sulcinux,Cyperaceae,(C.B.Clarke) C.B.Clarke,kew-238719,Accepted,Cyperus sulcinux,2897745,99272 Pycreus unioloides,Cyperaceae,(R.Br.) Urb.,kew-238955,Accepted,Cyperus unioloides,2895262,99573 Pyracantha angustifolia,Rosaceae,(Franch.) C.K.Schneid.,rjp-6005,Accepted,Pyracantha angustifolia,2891123,75192 +Pyracantha crenatoserrata,Rosaceae,(Hance) Rehder,rjp-6008,Accepted,unknown,unknown,unknown Pyracantha crenulata,Rosaceae,(Roxb. ex D.Don) M.Roem.,rjp-1129,Accepted,Pyracantha crenulata,2912743,75208 Pyracantha fortuneana,Rosaceae,(Maxim.) H.L.Li,rjp-6006,Accepted,Pyracantha crenatoserrata,2903529,208259 Pyracantha rogersiana,Rosaceae,(A.B.Jacks.) Coltm.-Rog.,rjp-761,Accepted,Pyracantha rogersiana,2914268,75244 @@ -17822,6 +17863,7 @@ Sarcochilus fitzgeraldii,Orchidaceae,F.Muell.,kew-184991,Accepted,Sarcochilus fi Sarcochilus hartmannii,Orchidaceae,F.Muell.,kew-185005,Accepted,Sarcochilus hartmannii,2898379,63075 Sarcochilus hillii,Orchidaceae,(F.Muell.) F.Muell.,kew-185006,Accepted,Sarcochilus hillii,NA,63097 Sarcochilus olivaceus,Orchidaceae,Lindl.,kew-185067,Accepted,Sarcochilus olivaceus,NA,63289 +Sarcochilus parviflorus,Orchidaceae,Lindl.,kew-185075,Accepted,unknown,unknown,unknown Sarcochilus spathulatus,Orchidaceae,R.S.Rogers,kew-185119,Accepted,Sarcochilus spathulatus,NA,63526 Sarcochilus weinthalii,Orchidaceae,F.M.Bailey,kew-185151,Accepted,Sarcochilus weinthalii,2890229,63618 Sarcocornia blackiana,Amaranthaceae,(Ulbr.) A.J. Scott,tro-7202264,Accepted,Sarcocornia blackiana,2908785,63667 @@ -17969,6 +18011,7 @@ Schefflera versteegii,Araliaceae,Harms,kew-187734,Accepted,unknown,unknown,unkno Schelhammera multiflora,Colchicaceae,R.Br.,kew-286954,Accepted,Schelhammera multiflora,2890740,88208 Schelhammera undulata,Colchicaceae,R.Br.,kew-286956,Accepted,Schelhammera undulata,2913726,88273 Schenkia australis,Gentianaceae,(R. Br.) G. Mans.,tro-50269693,Accepted,unknown,unknown,unknown +Schenkia spicata,Gentianaceae,(L.) G. Mans.,tro-50277334,Accepted,unknown,unknown,unknown Schinus areira,Anacardiaceae,L.,tro-1300781,Accepted,Schinus molle var. areira,2893428,88508 Schinus terebinthifolia,Anacardiaceae,Raddi,kew-2480191,Accepted,unknown,unknown,unknown Schismus barbatus,Poaceae,(L.) Thell.,kew-441222,Accepted,Schismus barbatus,2919983,88550 @@ -18062,6 +18105,7 @@ Schoenus lanatus,Cyperaceae,Labill.,kew-263381,Accepted,Schoenus lanatus,2899648 Schoenus latelaminatus,Cyperaceae,Kük.,kew-263386,Accepted,Schoenus latelaminatus,2917819,111227 Schoenus latitans,Cyperaceae,S.T.Blake,kew-263387,Accepted,Schoenus latitans,2896412,111252 Schoenus lepidosperma,Cyperaceae,(F.Muell.) K.L.Wilson,kew-263391,Accepted,Schoenus lepidosperma,2893030,141376 +Schoenus lepidosperma subsp. pachylepis,Cyperaceae,(S.T.Blake) K.L.Wilson,kew-263393,Accepted,unknown,unknown,unknown Schoenus loliaceus,Cyperaceae,Kük.,kew-263396,Accepted,Schoenus loliaceus,2907128,111336 Schoenus maschalinus,Cyperaceae,Roem. & Schult.,kew-263415,Accepted,Schoenus maschalinus,2917246,111380 Schoenus melanostachys,Cyperaceae,R.Br.,kew-263418,Accepted,Schoenus melanostachys,2909981,111406 @@ -18269,6 +18313,7 @@ Senecio euclaensis,Compositae,I.Thomps.,gcc-18275,Accepted,Senecio euclaensis,28 Senecio extensus,Compositae,I.Thomps.,gcc-77138,Accepted,Senecio extensus,2905037,188727 Senecio garlandii,Compositae,F.Muell. ex Belcher,gcc-41715,Accepted,Senecio garlandii,2910938,101158 Senecio gawlerensis,Compositae,M.E.Lawr.,gcc-32614,Accepted,Senecio gawlerensis,2908952,101184 +Senecio georgianus,Compositae,DC.,gcc-95952,Accepted,unknown,unknown,unknown Senecio gilbertii,Compositae,Turcz.,gcc-123371,Accepted,Senecio gilbertii,2901626,101241 Senecio glabrescens,Compositae,(DC.) Sch.Bip.,gcc-116838,Accepted,Senecio glabrescens,2916711,101289 Senecio glomeratus,Compositae,Desf. ex Poir.,gcc-89182,Accepted,Senecio glomeratus,2890035,101338 @@ -18293,6 +18338,7 @@ Senecio leucoglossus,Compositae,F.Muell.,gcc-108346,Accepted,Senecio leucoglossu Senecio linearifolius,Compositae,A.Rich.,gcc-5462,Accepted,Senecio linearifolius,7063134,102049 Senecio linearifolius var. dangarensis,Compositae,A.Rich.,gcc-5462,Accepted,Senecio linearifolius var. dangarensis,2889924,191823 Senecio longicollaris,Compositae,I.Thomps.,gcc-100070,Accepted,Senecio longicollaris,2890478,188720 +Senecio longipilus,Compositae,I.Thomps.,gcc-83410,Accepted,unknown,unknown,unknown Senecio macranthus,Compositae,A.Rich.,gcc-34208,Accepted,Senecio macranthus,2915258,102078 Senecio macrocarpus,Compositae,F.Muell. ex Belcher,gcc-117177,Accepted,Senecio macrocarpus,2890874,102085 Senecio madagascariensis,Compositae,Poir.,gcc-142094,Accepted,Senecio madagascariensis,2903107,116244 @@ -18724,6 +18770,7 @@ Soliva anthemifolia,Compositae,(Juss.) Sweet,gcc-80777,Accepted,Soliva anthemifo Soliva sessilis,Compositae,Ruiz & Pav.,gcc-98509,Accepted,Soliva sessilis,2908358,71668 Soliva stolonifera,Compositae,(Brot.) R.Br. ex G.Don,gcc-119720,Accepted,Soliva stolonifera,2887533,71709 Sonchus asper,Compositae,(L.) Hill,gcc-130230,Accepted,Sonchus asper,4343287,189698 +Sonchus asper subsp. glaucescens,Compositae,(Jord.) Ball ex Ball,gcc-52878,Accepted,unknown,unknown,unknown Sonchus hydrophilus,Compositae,Boulos,gcc-112439,Accepted,Sonchus hydrophilus,2917243,108263 Sonchus megalocarpa,Compositae,(Hook.f.) J.M.Black,gcc-151889,Accepted,Actites megalocarpus,2912188,176523 Sonchus oleraceus,Compositae,(L.) L.,gcc-26069,Accepted,Sonchus oleraceus,2895772,108370 @@ -19431,6 +19478,7 @@ Styphelia laeta subsp. latifolia,Ericaceae,R.Br.,kew-2593220,Unresolved,unknown, Styphelia longifolia,Ericaceae,R.Br.,kew-2593255,Unresolved,Styphelia longifolia,2894423,106240 Styphelia melaleucoides,Ericaceae,F.Muell.,kew-2593241,Unresolved,Styphelia melaleucoides,2916971,106420 Styphelia parvifolia,Ericaceae,F.Muell.,kew-2593139,Unresolved,Leptecophylla juniperina subsp. parvifolia,2911577,165711 +Styphelia perileuca,Ericaceae,J.M.Powell,kew-2593145,Unresolved,unknown,unknown,unknown Styphelia psiloclada,Ericaceae,J.M.Powell,kew-2593176,Unresolved,unknown,unknown,unknown Styphelia tenuiflora,Ericaceae,Benth.,kew-2592878,Unresolved,Styphelia tenuiflora,2907115,109009 Styphelia triflora,Ericaceae,Andrews,kew-2592852,Unresolved,Styphelia triflora,2912076,109124 @@ -20413,6 +20461,7 @@ Trifolium ornithopodioides,Leguminosae,(L.) Sm.,ild-8114,Accepted,Trifolium orni Trifolium pratense,Leguminosae,L.,ild-8127,Accepted,Trifolium pratense,2910767,54736 Trifolium repens,Leguminosae,L.,ild-8135,Accepted,Trifolium repens,2909697,54771 Trifolium resupinatum,Leguminosae,L.,ild-8136,Accepted,Trifolium resupinatum,2903479,54791 +Trifolium rubens,Leguminosae,L.,ild-9058,Accepted,unknown,unknown,unknown Trifolium scabrum,Leguminosae,L.,ild-8143,Accepted,Trifolium scabrum,2917087,54806 Trifolium striatum,Leguminosae,L.,ild-8162,Accepted,Trifolium striatum,2902421,69752 Trifolium subterraneum,Leguminosae,L.,ild-8165,Accepted,Trifolium subterraneum,2905033,69794 @@ -20507,6 +20556,7 @@ Tripladenia cunninghamii,Colchicaceae,D.Don,kew-290426,Accepted,unknown,unknown, Tripladenia cunninghamii,Colchicaceae,D.Don,kew-290426,Accepted,unknown,unknown,unknown Tripladenia cunninghamii,Colchicaceae,D.Don,kew-290426,Accepted,unknown,unknown,unknown Triplarina imbricata,Myrtaceae,(Sm.) A.R.Bean,kew-209013,Accepted,Triplarina imbricata,2916917,154626 +Triplarina nowraensis,Myrtaceae,A.R.Bean,kew-209015,Accepted,unknown,unknown,unknown Tripleurospermum inodorum,Compositae,(L.) Sch.Bip.,gcc-113650,Accepted,Tripleurospermum maritimum subsp. inodorum,2896761,206349 Tripogon loliiformis,Poaceae,(F.Muell.) C.E.Hubb.,kew-447494,Accepted,Tripogon loliiformis,7779140,72169 Tripterococcus brachylobus,Celastraceae,NA,NA,NA,Tripterococcus brachylobus,NA,http://id.biodiversity.org.au/instance/apni/953274 @@ -20812,6 +20862,7 @@ Veronica densifolia,Plantaginaceae,(F.Muell.) F.Muell.,kew-2453919,Accepted,Vero Veronica derwentiana,Plantaginaceae,Andrews,kew-2453928,Accepted,Veronica derwentiana,2917078,68107 Veronica derwentiana subsp. homalodonta,Plantaginaceae,(B.G.Briggs & Ehrend.) B.G.Briggs,kew-2761673,Accepted,unknown,unknown,unknown Veronica derwentiana subsp. maideniana,Plantaginaceae,(Gand.) B.G.Briggs,kew-2761674,Accepted,unknown,unknown,unknown +Veronica derwentiana subsp. subglauca,Plantaginaceae,(B.G.Briggs & Ehrend.) B.G.Briggs,kew-2605816,Accepted,unknown,unknown,unknown Veronica distans,Plantaginaceae,R.Br.,kew-2453912,Unresolved,Veronica distans,2913390,68193 Veronica formosa,Plantaginaceae,R.Br.,kew-2462840,Accepted,Veronica formosa,2898286,68249 Veronica gracilis,Plantaginaceae,R.Br.,kew-2462813,Unresolved,Veronica gracilis,2891930,68269 diff --git a/data/Barlow_1981/metadata.yml b/data/Barlow_1981/metadata.yml index 28b95a0c1..f96852194 100644 --- a/data/Barlow_1981/metadata.yml +++ b/data/Barlow_1981/metadata.yml @@ -54,7 +54,7 @@ config: value), value = ifelse(value %in% c("AB", "EAB"), "annual biennial", value), value = ifelse(value %in% c("AP", "EAP"), "annual perennial", value), value = ifelse(value %in% c("EPB", "DPB", "PB"), "biennial perennial", value) ) ) %>% arrange(i) %>% - select(-i) # approach taken in the above is to use data to calculate a series + select(-i) %>% mutate(value = ifelse(species_name %in% c("Grevillea robusta","Garuga floribunda var. floribunda","Myristica globosa subsp. muelleri","Pararchidendron pruinosum var. pruinosum") & trait == "lifeform","tree",value),value = ifelse(species_name %in% c("Corynocarpus rupestris subsp. arborescens","Mitrephora diversifolia") & trait == "lifeform","shrub treelet",value), value = ifelse(species_name %in% c("Piper hederaceum var. hederaceum") & trait == "lifeform","climber_vine_woody",value), value = ifelse(species_name %in% c("Stephania japonica var. discolor") & trait == "lifeform","vine",value), value = ifelse(species_name %in% c("Caesalpinia subtropica") & trait == "lifeform","climber_woody",value)) # approach taken in the above is to use data to calculate a series of trait tables, which are bound together with bind_rows. The index i is used to sort data according to original order in the file' traits: @@ -196,28 +196,28 @@ substitutions: replace: shrub - trait_name: plant_growth_form find: TV - replace: climber + replace: .na - trait_name: plant_growth_form find: SC - replace: climber + replace: shrub climber_woody - trait_name: plant_growth_form find: L - replace: climber + replace: climber_liana - trait_name: plant_growth_form find: SV replace: climber - trait_name: plant_growth_form find: TH - replace: tree + replace: herb - trait_name: plant_growth_form find: HL - replace: climber + replace: climber_liana - trait_name: plant_growth_form find: CV - replace: climber_vine + replace: climber_vine_woody - trait_name: plant_growth_form find: SE - replace: graminoid + replace: epiphyte - trait_name: plant_growth_form find: C replace: climber @@ -226,22 +226,22 @@ substitutions: replace: climber_shrub - trait_name: plant_growth_form find: TSC - replace: climber + replace: climber_tree climber_shrub - trait_name: plant_growth_form find: SU - replace: .na + replace: shrub subshrub - trait_name: plant_growth_form find: SH - replace: .na + replace: shrub herb - trait_name: plant_growth_form find: U replace: subshrub - trait_name: plant_growth_form find: VL - replace: climber + replace: climber_vine climber_liana - trait_name: plant_growth_form find: CP - replace: .na + replace: climber_vine_woody - trait_name: plant_growth_form find: SUH replace: .na @@ -250,19 +250,19 @@ substitutions: replace: aquatic - trait_name: plant_growth_form find: TSV - replace: .na + replace: treelet - trait_name: plant_growth_form find: HA replace: aquatic_herb - trait_name: plant_growth_form find: HV - replace: climber_herb + replace: epiphyte_herb epiphyte_woody - trait_name: plant_growth_form find: E - replace: graminoid + replace: epiphyte - trait_name: plant_growth_form find: HE - replace: graminoid + replace: hemi-epiphyte - trait_name: seed_shape find: 'NULL' replace: .na diff --git a/data/Moore_2019_2/metadata.yml b/data/Moore_2019_2/metadata.yml index 965a1c5da..8c12ac246 100644 --- a/data/Moore_2019_2/metadata.yml +++ b/data/Moore_2019_2/metadata.yml @@ -95,7 +95,7 @@ config: species_name: Species site_name: site_name context_name: Water_treatment - custom_R_code: data %>% mutate(site_name = "La Trobe University (Bundoora) Glasshouse") + custom_R_code: data %>% mutate(site_name = "La Trobe University (Bundoora) Glasshouse") %>% mutate(fire_response = ifelse(resprouting_proportion_individuals > 0,"resprouts","fire_killed")) traits: - var_in: Wet_weight_mg unit_in: mg @@ -186,6 +186,12 @@ traits: methods: Tillers were counted before the fire treatment. After 10 wk, plant survival and the number of post-fire tillers per plant were recorded. This variable is the proportion of plants within a treatment that displayed any resprouting. +- var_in: fire_response + unit_in: .na + trait_name: fire_response + value_type: expert_mean + replicates: .na + methods: Assigned the value 'resprouts' if the trait 'resprouting_proportion_individuals' is non-zero; else 'fire_killed' substitutions: - trait_name: regen_strategy find: crown