diff --git a/data/Richards_2008/data.csv b/data/Richards_2008/data.csv deleted file mode 100644 index 47bece3d6..000000000 --- a/data/Richards_2008/data.csv +++ /dev/null @@ -1,317 +0,0 @@ -name_original,site,photosynthetic pathway,Nfixer,GF,DecEv,LfType,LfForm,SLA (cm2/g),LMA (g/m2),LfSize (cm2),leaf longevity,thickness (microns),water content (%),k_mass,k_area,n_mass,n_area,p_mass,p_area,amass (nmol g-1 s-1),aarea (umolm-2s-1),gs (molm-2s-1),Rd (umol m-2 s-1),13-C,15-N,height -Eucalyptus regnans,Adams1984_BigCkBasin,C3,n,tree,E,B,S,,,,,,,0.36,,1.95,,0.09,,,,,,,, -Acacia dealbata,Adams1984_BigCkBasin,C3,y,,E,B,,,,,,,,0.54,,2.46,,0.09,,,,,,,, -Acacia obliquinervia,Adams1984_BigCkBasin,C3,y,,E,B,,,,,,,,0.39,,2.01,,0.07,,,,,,,, -Acacia verticillata,Adams1984_BigCkBasin,C3,y,,E,B,,,,,,,,0.43,,1.99,,0.06,,,,,,,, -Eucalyptus sieberi,Ahton1976_DrySclerophyll,,,,,,,,,,,,,,,,,0.04,,,,,,,, -Platylobium formosum,Ahton1976_DrySclerophyll,,,,,,,,,,,,,,,,,0.03,,,,,,,, -Atherosperma moschatum,Ahton1976_Rainforest,,,,,,,,,,,,,,,,,0.15,,,,,,,, -Nothofagus cunninghamii,Ahton1976_Rainforest,,,,,,,,,,,,,,,,,0.10,,,,,,,, -Eucalyptus regnans,Ahton1976_WetSclerophyll,,,,,,,,,,,,,,,,,0.10,,,,,,,, -Pomaderris aspera,Ahton1976_WetSclerophyll,,,,,,,,,,,,,,,,,0.08,,,,,,,, -Eucalyptus regnans,Ashton1975_WallabyCk,,,,,,,,,,,,,1.13,,1.52,,0.12,,,,,,,, -Olearia argophylla,Ashton1975_WallabyCk,,,,,,,,,,,,,2.67,,2.08,,0.40,,,,,,,, -Pomaderris aspera,Ashton1975_WallabyCk,,,,,,,,,,,,,1.13,,2.06,,0.42,,,,,,,, -Eucalyptus obliqua,Attiwill1980_MtDisappointment,C3,n,tree,E,B,S,,,,,,,0.45,,,,0.08,,,,,,,, -Acacia crassicarpa,Bell1985_Weipa,,,,,,,,,,,,,,,1.72,,0.05,,,,,,,, -Acacia rothii,Bell1985_Weipa,,,,,,,,,,,,,,,1.82,,0.04,,,,,,,, -Alstonia actinophylla,Bell1985_Weipa,,,,,,,,,,,,,,,1.78,,0.08,,,,,,,, -Erythrophloeum chlorostachys,Bell1985_Weipa,,,,,,,,,,,,,,,1.95,,0.08,,,,,,,, -Eucalyptus camadulensis,Bell1985_Weipa,,,,,,,,,,,,,,,1.11,,0.10,,,,,,,, -Eucalyptus tetrodonta,Bell1985_Weipa,,,,,,,,,,,,,,,0.90,,0.06,,,,,,,, -Grevillea pteridifolia,Bell1985_Weipa,,,,,,,,,,,,,,,1.10,,0.05,,,,,,,, -Melaleuca leucadendron,Bell1985_Weipa,,,,,,,,,,,,,,,0.78,,0.06,,,,,,,, -Melaleuca viridiflora,Bell1985_Weipa,,,,,,,,,,,,,,,0.88,,0.05,,,,,,,, -Banksia integrifolia,Bennett1996_Yanakie,C3,n,tree,E,B,S,,,,20,,,0.30,,1.10,,0.03,,,,,,,, -Callitris glauca,BevegeandJohnston1978 _Millmerran,,,,,,,,,,,,,0.39,,1.05,,0.08,,,,,,,, -Casuarina leuhmanii,BevegeandJohnston1978 _Millmerran,,,,,,,,,,,,,0.33,,0.90,,0.07,,,,,,,, -Eucalyptus bancroftii,BevegeandJohnston1978 _Millmerran,,,,,,,,,,,,,0.62,,1.31,,0.06,,,,,,,, -Eucalyptus grandis,BirkandTurner1992_WeddingBells,C3,n,tree,E,B,S,,,,,,,0.68,,1.56,,0.08,,,,,,,, -Brachychiton australis,Choatetal2006_ManyPeaks,C3,n,tree,D,,,134.4,,,,,,,,,,,,118.97,8.85,342.3,,,, -Cochlospermum gillivraei,Choatetal2006_ManyPeaks,C3,n,tree,D,,,165,,,,,,,,,,,,115.91,7.02,516.9,,,, -Alphitonia excelsa,Choatetal2006_ManyPeaks,C3,n,tree,E,,,94.4,,,,,,,,,,,,67.99,7.19,184.6,,,, -Austromyrtus bidwillii,Choatetal2006_ManyPeaks,C3,n,tree,E,,,116.1,,,,,,,,,,,,48.45,4.17,384.6,,,, -Eucalyptus globulus,Cromeretal1975_Morwell,C3,n,tree,E,B,S,,,,,,,,,1.40,,0.07,,,,,,,, -Acacia dealbata,Falsterunpub_WallabyCk,,,,,,,97.2,,2.3,,,,,,,,,,,,,,,, -Acacia melanoxylon,Falsterunpub_WallabyCk,,,,,,,78.2,,23.6,,,,,,,,,,,,,,,, -Acacia verticillata,Falsterunpub_WallabyCk,,,,,,,71.7,,0.1,,,,,,,,,,,,,,,, -Atherosperma moshatum,Falsterunpub_WallabyCk,,,,,,,85.3,,8.0,,,,,,,,,,,,,,,, -Bedfordia arborescens,Falsterunpub_WallabyCk,,,,,,,106.9,,65.5,,,,,,,,,,,,,,,, -Cassinia aculeata,Falsterunpub_WallabyCk,,,,,,,126.0,,0.4,,,,,,,,,,,,,,,, -Coprosma quadrifida,Falsterunpub_WallabyCk,,,,,,,183.8,,0.6,,,,,,,,,,,,,,,, -Eucalyptus regnans,Falsterunpub_WallabyCk,,,,,,,47.5,,15.6,,,,,,,,,,,,,,,, -Goodenia ovata,Falsterunpub_WallabyCk,,,,,,,139.5,,15.5,,,,,,,,,,,,,,,, -Hedycarya angustifolia,Falsterunpub_WallabyCk,,,,,,,96.3,,40.5,,,,,,,,,,,,,,,, -Helichrysum dendroideum,Falsterunpub_WallabyCk,,,,,,,136.1,,18.7,,,,,,,,,,,,,,,, -Lomatia fraseri,Falsterunpub_WallabyCk,,,,,,,60.6,,30.2,,,,,,,,,,,,,,,, -Nothofagus cunninghamii,Falsterunpub_WallabyCk,,,,,,,60.3,,1.5,,,,,,,,,,,,,,,, -Olearia argophylla,Falsterunpub_WallabyCk,,,,,,,72.1,,53.1,,,,,,,,,,,,,,,, -Olearia lirata,Falsterunpub_WallabyCk,,,,,,,135.5,,19.7,,,,,,,,,,,,,,,, -Pittosporum bicolor,Falsterunpub_WallabyCk,,,,,,,74.1,,3.0,,,,,,,,,,,,,,,, -Polyscias sambucifolia,Falsterunpub_WallabyCk,,,,,,,61.7,,24.9,,,,,,,,,,,,,,,, -Pomaderris aspera,Falsterunpub_WallabyCk,,,,,,,86.7,,40.7,,,,,,,,,,,,,,,, -Prostanthera lasianthos,Falsterunpub_WallabyCk,,,,,,,90.8,,20.6,,,,,,,,,,,,,,,, -Senecio,Falsterunpub_WallabyCk,,,,,,,166.1,,41.7,,,,,,,,,,,,,,,, -Senecio linearifolius,Falsterunpub_WallabyCk,,,,,,,237.8,,26.6,,,,,,,,,,,,,,,, -Zieria arborescens,Falsterunpub_WallabyCk,,,,,,,135.1,,10.2,,,,,,,,,,,,,,,, -Eucalyptus dives,Feller1980_MaroondahEO,C3,n,tree,E,B,S,,,,,,,0.44,,0.96,,0.06,,,,,,,,15-20 -Eucalyptus obliqua,Feller1980_MaroondahEO,C3,n,tree,E,B,S,,,,,,,0.41,,0.69,,0.05,,,,,,,,20-25 -Acacia dealbata,Feller1980_MaroondahER,C3,y,tree,E,B,,,,,,,,0.54,,3.37,,0.17,,,,,,,,10-15 -Acacia obliquinervia,Feller1980_MaroondahER,C3,y,tree,E,B,,,,,,,,0.53,,2.08,,0.11,,,,,,,,10-15 -Eucalyptus regnans,Feller1980_MaroondahER,C3,n,tree,E,B,S,,,,,,,0.86,,1.29,,0.11,,,,,,,,40-45 -Eucalyptus marginata,Hatch1955_Dwellingup,C3,n,tree,E,B,S,,,,,,,0.37,,1.03,,0.09,,,,,,,, -Eucalyptus agglomerata,Hopmansetal1993_Maramingo,C3,n,tree,E,B,S,,,,,,,0.30,,0.90,,0.04,,,,,,,, -Eucalyptus muelleriana,Hopmansetal1993_Maramingo,C3,n,tree,E,B,S,,,,,,,0.35,,1.05,,0.06,,,,,,,, -Eucalyptus sieberi,Hopmansetal1993_Maramingo,C3,n,tree,E,B,S,,,,,,,0.34,,0.96,,0.05,,,,,,,, -Eucalyptus dalrympleana,Lambert1979thesis_BagoSF,,,,,,,,,,,,,,,1.26,,0.09,,,,,,,, -Eucalyptus radiata,Lambert1979thesis_BagoSF,,,,,,,,,,,,,,,1.59,,0.16,,,,,,,, -Elucalyptus dives,Lambert1979thesis_LidsdaleSF,,,,,,,,,,,,,,,1.25,,0.07,,,,,,,, -Eucalyptus maculosa,Lambert1979thesis_LidsdaleSF,,,,,,,,,,,,,,,0.92,,0.06,,,,,,,, -Eucalyptus rossi,Lambert1979thesis_LidsdaleSF,,,,,,,,,,,,,,,1.04,,0.05,,,,,,,, -Eucalyptus rubida,Lambert1979thesis_LidsdaleSF,,,,,,,,,,,,,,,0.92,,0.06,,,,,,,, -Maireana pyramidata,Leigh&Nicotra2003_LakeTyrrell,C4,n,shrub,,,,79.05,,,,,,,,2.79,3.53,,,,,,,17.245,, -Gynatrix pulchella,Leigh2006_ACT,,,shrub,E,,,160,,,,,,,,4.15,2.59,,,395.17,24.70,,,,, -Grevillea laurifolia,Leishmanetal2007_BlueMtns,,,Climber,,,,60.16819999,,,,,,,,0.9418,,,,133.97,13.360,0.3286,-0.8968,,, -Dianella caerulea,Leishmanetal2007_BlueMtns,,,herb,,,,72.08996876,,,,,,,,1.3782,,,,74.47,6.198,0.0785,-0.6008,,, -Mirbelia platylaboides,Leishmanetal2007_BlueMtns,,,herb,,,,57.41201578,,,,,,,,1.532,,,,96.76,11.349,0.228858923,-0.44329167,,, -Symphonemia montana,Leishmanetal2007_BlueMtns,,,herb,,,,92.5390885,,,,,,,,1.0232,,,,138.64,8.616,0.153162105,-0.917748092,,, -Acacia rubida,Leishmanetal2007_BlueMtns,,,Shrub,,,,95.77984158,,,,,,,,3.1632,,,,156.77,13.913,0.248277933,-1.12525418,,, -Olearia asterotricha,Leishmanetal2007_BlueMtns,,,Shrub,,,,80.16263001,,,,,,,,1.5428,,,,140.71,11.165,0.159620692,-1.003690893,,, -Persoonia myrtilloides subsp. Myrtilloides,Leishmanetal2007_BlueMtns,,,Shrub,,,,58.87114301,,,,,,,,1.1084,,,,126.50,12.986,0.126290318,-0.624971425,,, -Pittosporum undulatum,Leishmanetal2007_BlueMtns,,,tree,,,,200.7239599,,,,,,,,1.8692,,,,248.76,7.436,0.05618,-0.9274,,, -Eucalyptus seberi,Leishmanetal2007_BlueMtns,,,tree,,,,52.20394348,,,,,,,,1.3506,,,,154.70,17.780,0.3434,-0.867,,, -Glycine microphylla,Leishmanetal2007_CPW,,,Climber,,,,155.3882895,,,,,,,,3.6098,,,,506.8351592,18.59879381,0.266661989,-1.515807585,,, -Hardenbergia violacea,Leishmanetal2007_CPW,,,Climber,,,,127.3574368,,,,,,,,3.1772,,,,429.6190868,20.24,0.423,-1.1934,,, -Microlaena stipoides,Leishmanetal2007_CPW,,,Grass,,,,339.5110107,,,,,,,,2.8896,,,,453.0641399,19.05547409,0.550787261,-1.199286613,,, -Brunoniella australis,Leishmanetal2007_CPW,,,herb,,,,148.6658507,,,,,,,,3.9876,,,,390.1679182,14.8921081,0.235835732,-1.156539455,,, -Dichondra repens,Leishmanetal2007_CPW,,,herb,,,,227.7146125,,,,,,,,3.259,,,,538.6125456,18.06941556,0.319490309,-0.919346744,,, -Einadia hastata,Leishmanetal2007_CPW,,,herb,,,,150.819113,,,,,,,,6.097,,,,379.9165752,17.31129859,0.202068263,-1.358231573,,, -Pratia purpurescens,Leishmanetal2007_CPW,,,herb,,,,316.111365,,,,,,,,5.2288,,,,757.3328139,13.99809186,0.200765841,-0.747248399,,, -Acacia falcata,Leishmanetal2007_CPW,,,Shrub,,,,63.50169082,,,,,,,,2.2958,,,,125.3524424,11.58482817,0.390364883,-1.495353179,,, -Bursaria spinosa,Leishmanetal2007_CPW,,,Shrub,,,,104.0282568,,,,,,,,1.9926,,,,200.5310804,12.18924655,0.238209028,-0.688464218,,, -Eremophila debilis,Leishmanetal2007_CPW,,,Shrub,,,,142.116303,,,,,,,,3.1356,,,,421.7048984,18.01914174,0.386179913,-1.409202542,,, -Eucalyptus crebra,Leishmanetal2007_CPW,,,tree,,,,75.86539061,,,,,,,,1.664,,,,203.4551234,13.20491884,0.344750076,-1.397252597,,, -Eucalyptus moluccana,Leishmanetal2007_CPW,,,tree,,,,64.05478215,,,,,,,,2.0276,,,,191.0967667,17.9,0.5802,-2.088,,, -Marsdenia rostrata,Leishmanetal2007_Dorrigo,,,Climber,,,,110.3454045,,,,,,,,1.915,,,,115.72,6.29,0.08236,-0.359,,, -Ripogonum album,Leishmanetal2007_Dorrigo,,,Climber,,,,104.6851844,,,,,,,,1.3944,,,,57.33,3.29,0.03244,-0.3194,,, -Rubus hillii,Leishmanetal2007_Dorrigo,,,Climber,,,,138.4331023,,,,,,,,2.6878,,,,284.25,12.32,0.1724,-0.6102,,, -Cordyline stricta,Leishmanetal2007_Dorrigo,,,Shrub,,,,116.6989328,,,,,,,,1.7938,,,,72.66,3.74,0.06104,-0.197,,, -Eupomatia laurina,Leishmanetal2007_Dorrigo,,,tree,,,,169.580267,,,,,,,,1.9514,,,,104.01,3.68,0.027536,-0.3754,,, -Glochidion fernandi,Leishmanetal2007_Dorrigo,,,tree,,,,148.9395539,,,,,,,,1.8094,,,,221.18,8.91,0.1358,-0.5242,,, -Neolitsea dealbata,Leishmanetal2007_Dorrigo,,,tree,,,,137.042141,,,,,,,,2.3672,,,,167.79,7.35,0.10176,-0.3504,,, -Omalanthus populifolia,Leishmanetal2007_Dorrigo,,,tree,,,,212.5020135,,,,,,,,2.9978,,,,146.23,4.73,0.043325,,,, -Callicoma serratifolia,Leishmanetal2007_Dorrigo,,,tree,,,,199.7167532,,,,,,,,1.4552,,,,210.70,6.33,0.08565,-0.18765,,, -Dubosia myoporoides,Leishmanetal2007_Dorrigo,,,tree,,,,124.0819409,,,,,,,,1.6896,,,,115.15,5.57,0.06858,-0.2962,,, -Ficus coronata,Leishmanetal2007_Dorrigo,,,tree,,,,133.3636166,,,,,,,,2.3188,,,,102.33,4.60,0.08572,-0.454,,, -Guioa semiglauca,Leishmanetal2007_Dorrigo,,,tree,,,,144.1701257,,,,,,,,1.7876,,,,186.56,7.76,0.10748,-0.421597822,,, -Acacia longifolia,Leishmanetal2007_Haselhurst,,,,,,,75.95115777,,,,,,,,1.96,,0.044,,,,,,,, -Acacia rubida,Leishmanetal2007_Haselhurst,,,,,,,160.8716289,,,,,,,,3.1,,0.122,,,,,,,, -Adiantum hispidulum,Leishmanetal2007_Haselhurst,,,,,,,141.222686,,,,,,,,1.83,,0.163,,,,,,,, -Allocasuarina (?) diminuta,Leishmanetal2007_Haselhurst,,,,,,,45.86420951,,,,,,,,1.41,,0.039,,,,,,,, -Allocasuarina littoralis,Leishmanetal2007_Haselhurst,,,,,,,60.18416091,,,,,,,,1.72,,0.031,,,,,,,, -Austromyrtus tenuifolia,Leishmanetal2007_Haselhurst,,,,,,,73.11158342,,,,,,,,1.23,,0.064,,,,,,,, -Banksia serrata,Leishmanetal2007_Haselhurst,,,,,,,47.12171958,,,,,,,,0.75,,0.03,,,,,,,, -Banksia spinulosa var collina,Leishmanetal2007_Haselhurst,,,,,,,78.93700787,,,,,,,,1.22,,0.064,,,,,,,, -Banksia spinulosa var cunninghamii,Leishmanetal2007_Haselhurst,,,,,,,36.54624665,,,,,,,,0.8,,0.028,,,,,,,, -Callicoma serratifolia,Leishmanetal2007_Haselhurst,,,,,,,73.51986808,,,,,,,,1.05,,0.038,,,,,,,, -Ceratopetalum apetalum,Leishmanetal2007_Haselhurst,,,,,,,73.51986808,,,,,,,,1.05,,0.038,,,,,,,, -Christella dentata,Leishmanetal2007_Haselhurst,,,,,,,101.3563173,,,,,,,,1.18,,0.061,,,,,,,, -Dillwynia retorta,Leishmanetal2007_Haselhurst,,,,,,,175.9651416,,,,,,,,1.65,,0.053,,,,,,,, -Euclayptus piperita,Leishmanetal2007_Haselhurst,,,,,,,234.8851852,,,,,,,,1.59,,0.072,,,,,,,, -Eustrephus latifolius,Leishmanetal2007_Haselhurst,,,,,,,127.0742358,,,,,,,,1.97,,0.095,,,,,,,, -Exocarpos cupressiformis,Leishmanetal2007_Haselhurst,,,,,,,246.3816794,,,,,,,,2,,0.115,,,,,,,, -Gymnostachys anceps,Leishmanetal2007_Haselhurst,,,,,,,49.49872671,,,,,,,,1.28,,0.099,,,,,,,, -Hakea dactyloides,Leishmanetal2007_Haselhurst,,,,,,,58.6595968,,,,,,,,1.08,,0.06,,,,,,,, -Hardenbergia violacea,Leishmanetal2007_Haselhurst,,,,,,,177.8846154,,,,,,,,1.57,,0.029,,,,,,,, -Hibbertia aspersa,Leishmanetal2007_Haselhurst,,,,,,,199.2212849,,,,,,,,2.9,,0.165,,,,,,,, -Juncus spp,Leishmanetal2007_Haselhurst,,,,,,,152.3639706,,,,,,,,1.76,,0.072,,,,,,,, -Lepidosperma urophorum,Leishmanetal2007_Haselhurst,,,,,,,57.45399516,,,,,,,,1.47,,0.162,,,,,,,, -Logania albiflora,Leishmanetal2007_Haselhurst,,,,,,,22.93043381,,,,,,,,0.54,,0.036,,,,,,,, -Lomandra longifolia,Leishmanetal2007_Haselhurst,,,,,,,53.57643624,,,,,,,,1.465,,0.065,,,,,,,, -Lomatia silaifolia,Leishmanetal2007_Haselhurst,,,,,,,78.40577646,,,,,,,,1.105,,0.0475,,,,,,,, -Microlaena stipoides,Leishmanetal2007_Haselhurst,,,,,,,71.89342561,,,,,,,,1.14,,0.044,,,,,,,, -Notelea spp,Leishmanetal2007_Haselhurst,,,,,,,243.3769634,,,,,,,,1.35,,0.08,,,,,,,, -Panicum simile,Leishmanetal2007_Haselhurst,,,,,,,254.059125,,,,,,,,2.9,,0.171,,,,,,,, -Persoonia linearis,Leishmanetal2007_Haselhurst,,,,,,,154.9082144,,,,,,,,1.82,,0.194,,,,,,,, -Persoonia pinifolia,Leishmanetal2007_Haselhurst,,,,,,,88.47084649,,,,,,,,1.09,,0.0905,,,,,,,, -Petrophile pulchella,Leishmanetal2007_Haselhurst,,,,,,,81.60356347,,,,,,,,1.03,,0.116,,,,,,,, -Pimelea linifolia,Leishmanetal2007_Haselhurst,,,,,,,41.08253669,,,,,,,,0.8,,0.025,,,,,,,, -Pittosporum undulatum,Leishmanetal2007_Haselhurst,,,,,,,104.4542072,,,,,,,,1.4725,,0.09725,,,,,,,, -Pteridium esculentum,Leishmanetal2007_Haselhurst,,,,,,,179.8654373,,,,,,,,1.86,,0.093,,,,,,,, -Woollsia pungens,Leishmanetal2007_Haselhurst,,,,,,,97.11058758,,,,,,,,0.81,,0.01832997,,,,,,,, -Xanthorrhoea arborea,Leishmanetal2007_Haselhurst,,,,,,,44.64513237,,,,,,,,1.21,,0.0645,,,,,,,, -Xanthorrhoea spp,Leishmanetal2007_Haselhurst,,,,,,,36.44325434,,,,,,,,1,,0.056,,,,,,,, -Smilax glyciphylla,Leishmanetal2007_HS,,,Climber,,,,88.17416149,,,,,,,,1.18,,,,67.48262492,4.592,0.1025,-0.4472,,, -Pteridium esculentum,Leishmanetal2007_HS,,,Fern,,,,89.6799177,,,,,,,,2.12,,,,172.2626142,11.43555918,0.165915157,-1.705370547,,, -Imperata cylindrica,Leishmanetal2007_HS,,,Grass,,,,161.0539089,,,,,,,,1.60,,,,272.2884753,10.144,0.1067,-0.7984,,, -Oplismenus aemulus,Leishmanetal2007_HS,,,Grass,,,,561.6490824,,,,,,,,4.29,,,,589.9796009,8.26678514,0.106471445,-1.092084864,,, -Commelina cyanea,Leishmanetal2007_HS,,,herb,,,,433.5937085,,,,,,,,4.04,,,,688.0935463,11.9265578,0.255590765,-0.9871116,,, -Dianella caerula,Leishmanetal2007_HS,,,herb,,,,145.1440923,,,,,,,,1.97,,,,172.2376562,7.12,0.12602,-0.5918,,, -Lomandra longifolia,Leishmanetal2007_HS,,,herb,,,,41.99141274,,,,,,,,1.31,,,,62.14729086,8.88,0.209,-0.641,,, -Siegesbeckia orientalis,Leishmanetal2007_HS,,,herb,,,,272.5548834,,,,,,,,1.99,,,,635.9613946,14,0.679,-1.1974,,, -Xanthorrhoea sp,Leishmanetal2007_HS,,,herb,,,,36.06218873,,,,,,,,1.13,,,,39.57224177,6.584,0.10116,-0.437778183,,, -Acacia longifolia,Leishmanetal2007_HS,,,Shrub,,,,94.86436357,,,,,,,,2.62,,,,140.6838512,8.898,0.3992,-1.548,,, -Banksia serrata,Leishmanetal2007_HS,,,Shrub,,,,41.03009401,,,,,,,,1.04,,,,71.69325094,10.484,0.2224,-0.8324,,, -Banksia spinulosa,Leishmanetal2007_HS,,,Shrub,,,,60.47285981,,,,,,,,1.01,,,,121.5497104,16.16603594,0.328894524,-0.983867434,,, -Grevillea buxifolia,Leishmanetal2007_HS,,,Shrub,,,,87.53390229,,,,,,,,0.86,,,,113.9764703,7.148497002,0.175790193,-0.663722682,,, -Persoonia pinifolia,Leishmanetal2007_HS,,,Shrub,,,,120.637546,,,,,,,,0.84,,,,94.28817917,9.615808665,0.253154144,-1.085335456,,, -Pittosporum undulatum,Leishmanetal2007_HS,,,Shrub,,,,91.92471507,,,,,,,,1.63,,,,93.79385094,6.122,0.06658,-0.7904,,, -Acacia parramatensis,Leishmanetal2007_HS,,,tree,,,,75.32629344,,,,,,,,3.52,,,,123.6501901,9.756,0.1848,-0.6622,,, -Casuarina sp,Leishmanetal2007_HS,,,tree,,,,57.06141563,,,,,,,,1.53,,,,136.4968268,19.58376914,0.267315248,-5.815960432,,, -Eucalyptus gummifera,Leishmanetal2007_HS,,,tree,,,,68.75648843,,,,,,,,1.27,,,,139.5756715,12.18,0.279,-1.0572,,, -Microlaena stipoides,Leishmanetal2007_Hunter Valley,,,Grass,,,,385.899987,,,,,,,,2.6006,,,,427.0626523,6.64,0.16994,-1.051330795,,, -Dichondra repens,Leishmanetal2007_Hunter Valley,,,herb,,,,224.7138848,,,,,,,,1.8398,,,,263.3699815,8.153580126,0.127046997,-0.723638309,,, -Persicaria decipiens,Leishmanetal2007_Hunter Valley,,,herb,,,,199.0378677,,,,,,,,2.3172,,,,347.2755534,16.73410606,0.280282842,-1.1288,,, -Pratia purpurescens,Leishmanetal2007_Hunter Valley,,,herb,,,,336.0377451,,,,,,,,2.1346,,,,368.4226073,12.5493553,0.392247546,-1.751911135,,, -Rumex brownii,Leishmanetal2007_Hunter Valley,,,herb,,,,169.697428,,,,,,,,3.753,,,,572.4459905,20.24,0.5312,-2.09,,, -Urtica incisa,Leishmanetal2007_Hunter Valley,,,herb,,,,252.432201,,,,,,,,3.9598,,,,702.6029594,16.7,0.5702,-0.8706,,, -Acacia parvipinnula,Leishmanetal2007_Hunter Valley,,,Shrub,,,,66.62927199,,,,,,,,2.61075,,,,143.2372699,11.34405487,0.160260343,-1.054658927,,, -Acacia salicina,Leishmanetal2007_Hunter Valley,,,Shrub,,,,67.18946298,,,,,,,,2.965,,,,163.8664739,13.7,0.40675,-1.0455,,, -Casuarina cunninghamiana,Leishmanetal2007_Hunter Valley,,,tree,,,,35.16384576,,,,,,,,2.2962,,,,41.04700846,7.912202076,0.140245477,-1.172051925,,, -Eucalyptus camaldulensis,Leishmanetal2007_Hunter Valley,,,tree,,,,67.81958109,,,,,,,,2.1578,,,,170.4532138,15.08,0.3258,-1.5324,,, -Melia azedarach var. australasica,Leishmanetal2007_Hunter Valley,,,tree,,,,175.9030721,,,,,,,,3.6634,,,,332.5154406,11.342,0.11172,-0.5854,,, -Eucalyptus grandis,Leuningetal1991_Toolara,C3,n,tree,E,B,S,90,,,,,,,,1.52,1.69,0.11,0.12,,,,,,, -Eucalyptus tereticornis,Marsh&Adams1995_Moormung,,,,,,,,,,,,,,,1.27,,,,,,,,,, -Acacia dealbata,Meakinsunpub_Brindabella1,,,,,,,,,,,,,0.12,,2.40,,0.09,,,,,,,, -Eucalyptus fastigata,Meakinsunpub_Brindabella1,,,,,,,,,,,,,0.13,,1.50,,0.10,,,,,,,, -Pomaderris apetala,Meakinsunpub_Brindabella1,,,,,,,,,,,,,0.10,,2.00,,0.13,,,,,,,, -Acacia melanoxylon,Meakinsunpub_Brindabella2,,,,,,,,,,,,,0.89,,2.80,,0.21,,,,,,,, -Eucalyptus delegatensis,Meakinsunpub_Brindabella2,,,,,,,,,,,,,0.12,,1.40,,0.10,,,,,,,, -Bedfordia salicina,Meakinsunpub_Brindabella3,,,,,,,,,,,,,0.08,,1.90,,0.19,,,,,,,, -Eucalyptus robertsonii,Meakinsunpub_Brindabella3,,,,,,,,,,,,,0.12,,1.40,,0.10,,,,,,,, -Acacia harpophylla,Mooreetal1967_Meandarra,,,,,,,,,,,,,0.75,,1.66,,0.06,,,,,,,, -Geijera parviflora,Mooreetal1967_Meandarra,,,,,,,,,,,,,1.35,,1.64,,0.08,,,,,,,, -Argyrodendron peralatum,Pearcy1987_CurtinFig,C3,n,tree,E,B,C,,245,,,,,,,1.67,4.10,,,,9.40,170,,,, -Boronia muelleri,Peetersetal2006_BunyipPk,,,shrub,E,B,C,,70,2.93,,0.201,70.37784448,,,1.5597,,,,,,,,,, -Zieria arborescens,Peetersetal2006_BunyipPk,,,shrub,E,B,C,,60,35.4,,0.164,72.55882834,,,2.2616,,,,,,,,,, -Acacia genistifolia,Peetersetal2006_BunyipPk,,,shrub,E,N,s,,180,1.65,,0.307,56.60428141,,,1.5702,,,,,,,,,, -Acacia myrtifolia,Peetersetal2006_BunyipPk,,,shrub,E,B,s,,280,0.2,,0.58,60.08782069,,,1.7503,,,,,,,,,, -Banksia marginata,Peetersetal2006_BunyipPk,,,shrub,E,B,S,,260,2,,0.259,52.6516878,,,0.9516,,,,,,,,,, -Banksia spinulosa,Peetersetal2006_BunyipPk,,,shrub,E,B,S,,140,3.07,,0.252,55.5766787,,,1.1444,,,,,,,,,, -Correa reflexa,Peetersetal2006_BunyipPk,,,shrub,E,B,S,,90,9.66,,0.2,74.34860749,,,1.2709,,,,,,,,,, -Grevillea barklyana,Peetersetal2006_BunyipPk,,,shrub,E,B,S,,150,41.21,,0.234,54.88814674,,,0.9519,,,,,,,,,, -Hakea sericea,Peetersetal2006_BunyipPk,,,shrub,E,N,S,,480,0.37,,0.937,52.37414443,,,0.6672,,,,,,,,,, -Hakea ulicina,Peetersetal2006_BunyipPk,,,shrub,E,N,S,,270,1.18,,0.408,48.12353186,,,0.5925,,,,,,,,,, -Hedycarya angustifolia,Peetersetal2006_BunyipPk,,,shrub,E,B,S,,70,21.47,,0.242,75.11776014,,,1.9386,,,,,,,,,, -Lomatia fraseri,Peetersetal2006_BunyipPk,,,shrub,E,B,S,,140,31.69,,0.273,57.80656157,,,0.835,,,,,,,,,, -Phebalium bilobum,Peetersetal2006_BunyipPk,,,shrub,E,B,S,,90,1.32,,0.213,62.07204379,,,1.4242,,,,,,,,,, -Pomaderris aspera,Peetersetal2006_BunyipPk,,,shrub,E,B,S,,80,34.83,,0.122,66.56381792,,,1.7293,,,,,,,,,, -Prostanthera lasianthos,Peetersetal2006_BunyipPk,,,shrub,E,B,S,,80,14.06,,0.222,69.40775918,,,1.664,,,,,,,,,, -Pultenaea muelleri,Peetersetal2006_BunyipPk,,,shrub,E,B,S,,80,0.22,,0.123,51.7539828,,,1.9526,,,,,,,,,, -Pultenaea weindorferi,Peetersetal2006_BunyipPk,,,shrub,E,B,S,,100,0.09,,0.2,55.64417864,,,1.604,,,,,,,,,, -Spyridium parvifolium,Peetersetal2006_BunyipPk,,,shrub,E,B,S,,100,1.7,,0.109,61.49344136,,,1.3181,,,,,,,,,, -Viola hederacea,Read&Sanson2003_MelbBotGardens,,,herb,,,,,29,,,,,,,2.52,0.73,0.23,0.07,,,,,,, -Anopterus glandulosus,Read&Sanson2003_MelbBotGardens,,,shrub,,,,,107,,,,,,,1.55,1.66,0.19,0.20,,,,,,, -Goodenia ovata,Read&Sanson2003_MelbBotGardens,,,shrub,,,,,46,,,,,,,3.26,1.50,0.14,0.07,,,,,,, -Leucopogon parviflorus,Read&Sanson2003_MelbBotGardens,,,shrub,,,,,107,,,,,,,1.07,1.15,0.06,0.07,,,,,,, -Tasmannia lanceolata,Read&Sanson2003_MelbBotGardens,,,shrub,,,,,107,,,,,,,1.92,2.05,0.12,0.13,,,,,,, -Agapetes meiniana,Read&Sanson2003_MelbBotGardens,,,shrub,,,,,176,,,,,,,0.98,1.72,0.23,0.40,,,,,,, -Acacia melanoxylon,Read&Sanson2003_MelbBotGardens,,,tree,,,,,117,,,,,,,2.45,2.87,0.08,0.10,,,,,,, -Acmena smithii,Read&Sanson2003_MelbBotGardens,,,tree,,,,,122,,,,,,,1.34,1.64,0.12,0.15,,,,,,, -Diospyros australis,Read&Sanson2003_MelbBotGardens,,,tree,,,,,162,,,,,,,1.69,2.73,0.12,0.20,,,,,,, -Guilfoylia monostylis,Read&Sanson2003_MelbBotGardens,,,tree,,,,,86,,,,,,,3.12,2.68,0.10,0.08,,,,,,, -Heritiera trifoliolata,Read&Sanson2003_MelbBotGardens,,,tree,,,,,123,,,,,,,1.51,1.86,0.11,0.13,,,,,,, -Hernandia bivalvis,Read&Sanson2003_MelbBotGardens,,,tree,,,,,82,,,,,,,2.21,1.81,0.21,0.17,,,,,,, -Nothofagus moorei,Read&Sanson2003_MelbBotGardens,,,tree,,,,,130,,,,,,,1.32,1.71,0.14,0.18,,,,,,, -Banksia serrata,Read&Sanson2003_MelbBotGardens,,,tree,,,,,190,,,,,,,1.00,1.90,0.02,0.04,,,,,,, -Austrobaileya scandens,Read&Sanson2003_MelbBotGardens,,,vine,,,,,106,,,,,,,1.79,1.89,0.32,0.34,,,,,,, -Araucaria cunninghamii,RichardsAustralia_Hooppineplantation25,C3,n,tree,E,N,S,,,,,,,,,2.22,,,,,,,,-30.92,, -Araucaria cunninghamii,RichardsAustralia_Hooppineplantation34,C3,n,tree,E,N,S,,,,,,,,,2.29,,,,,,,,-31.57,, -Araucaria cunninghamii,RichardsAustralia_Hooppineplantation50,C3,n,tree,E,N,S,,,,,,,,,1.72,,,,,,,,-30.33,, -Araucaria cunninghamii,RichardsAustralia_Hooppineplantation63,C3,n,tree,E,N,S,,,,,,,,,1.68,,,,,,,,-30.70,, -Grevillea robusta,RichardsAustralia_Maleny,C3,n,tree,D,B,C,97.8,,,7.44,,,,,2.04,2.09,0.08,,,12.91,73.3,,-25.26,, -Castanospermum australe,RichardsAustralia_Maleny,C3,,tree,E,B,C,123.1,,,12.12,,,,,3.00,2.44,0.14,,,6.19,195.7,,-27.37,, -Elaeocarpus angustifolius,RichardsAustralia_Maleny,C3,n,tree,E,B,S,124.8,,,7.68,,,,,2.56,2.05,0.21,,,12.09,228.6,,-28.38,, -Gardenia actinocarpa,RichardsAustralia_NorthQueensland1,C3,n,shrub,E,B,S,223.0,,,,,,,,1.50,0.67,0.06,,,,,,-33.33,, -Xanthostemon chrysanthus,RichardsAustralia_NorthQueensland1,C3,n,tree,E,B,S,130.0,,,,,,,,1.10,0.85,0.06,,,,,,-32.89,, -Xanthostemon formosus,RichardsAustralia_NorthQueensland1,C3,n,tree,E,B,S,159.0,,,,,,,,1.10,0.69,0.05,,,,,,-32.27,, -Archidendron kanisii,RichardsAustralia_NorthQueensland1,C3,y,tree,E,B,S,181.0,,,,,,,,2.20,1.22,0.06,,,,,,-32.79,, -Archidendron whitei,RichardsAustralia_NorthQueensland2,C3,,tree,E,B,S,230.0,,,,,,,,2.80,1.22,0.08,,,,,,-33.73,, -Gardenia ovularis,RichardsAustralia_NorthQueensland3,C3,n,tree,E,B,S,168.0,,,,,,,,1.50,0.89,0.07,,,,,,-32.54,, -Castanopsermum australe,SpechtandTurner2006_JohnstonsScrub,C3,,tree,E,B,C,,59.2,,,,,0.87,0.51,3.01,1.78,0.10,0.06,,,,,,, -Flindersia shottiana,SpechtandTurner2006_JohnstonsScrub,C3,n,tree,E,B,S,,104.9,,,,,1.11,1.17,2.01,2.11,0.08,0.08,,,,,,, -Dysoxylum fraserianum,SpechtandTurner2006_JohnstonsScrub,C3,n,tree,E,B,,,,,,,,2.34,,2.85,,0.11,,,,,,,, -Dysoxylun mollissimum,SpechtandTurner2006_JohnstonsScrub,C3,n,tree,E,B,,,31.5,,,,,1.36,0.43,4.21,1.33,0.13,0.04,,,,,,, -Heritiera trifoliolata,SpechtandTurner2006_JohnstonsScrub,C3,n,tree,E,B,,,81.3,,,,,1.17,0.95,2.22,1.80,0.07,0.06,,,,,,, -Toona ciliata,SpechtandTurner2006_RockyCrk,C3,n,tree,D,B,C,,,,,,,,,1.73,,0.05,,,,,,,, -Grevillea robusta,SpechtandTurner2006_RockyCrk,C3,n,tree,d,B,C,,,,,,,,,1.64,,0.04,,,,,,,, -Araucaria cunninghamii,SpechtandTurner2006_RockyCrk,C3,n,tree,E,N,S,,,,,,,,,1.39,,0.25,,,,,,,, -Elaeocarpus grandis,SpechtandTurner2006_RockyCrk,C3,n,tree,E,B,S,,,,,,,,,1.91,,0.07,,,,,,,, -Flindersia brayleyana,SpechtandTurner2006_RockyCrk,C3,n,tree,E,B,S,,,,,,,,,1.34,,0.27,,,,,,,, -Gmelina liechhardtii,SpechtandTurner2006_RockyCrk,C3,n,tree,d,B,S,,,,,,,,,1.59,,0.06,,,,,,,, -Rhodosphaera rhodanthema,SpechtandTurner2006_RockyCrk,C3,n,tree,E,B,,,,,,,,,,1.84,,0.11,,,,,,,, -Eucalyptus grandis,TurnerandLambert1983_Conglomerate,C3,n,tree,E,B,S,,,,,,,0.65,,1.47,,0.09,,,,,,,, -Eucalyptus badgensis,Warrenetal2006_Glencoe,C3,n,tree,E,B,S,42.69,,13.6,,0.41,,,,13.17,3.11,,,,,,,-30.25,, -Eucalyptus benthamii var. benthamii,Warrenetal2006_Glencoe,C3,n,tree,E,B,S,52.73,,25.3,,0.29,,,,12.43,2.37,,,,,,,-31.34,, -Eucalyptus bosistoana,Warrenetal2006_Glencoe,C3,n,tree,E,B,S,41.19,,19.2,,0.40,,,,9.67,2.35,,,,,,,-30.35,, -Eucalyptus botryoides,Warrenetal2006_Glencoe,C3,n,tree,E,B,S,61.58,,24.6,,0.32,,,,12.37,1.93,,,,,,,-30.92,, -Eucalyptus brookerana,Warrenetal2006_Glencoe,C3,n,tree,E,B,S,38.70,,31.0,,0.39,,,,12.11,3.14,,,,,,,-28.86,, -Eucalyptus cameronii,Warrenetal2006_Glencoe,C3,n,tree,E,B,S,45.42,,21.1,,0.40,,,,9.82,2.17,,,,,,,-27.96,, -Eucalyptus cypellocarpa,Warrenetal2006_Glencoe,C3,n,tree,E,B,S,36.55,,43.5,,0.49,,,,9.65,2.69,,,,,,,-28.07,, -Eucalyptus delegatensis,Warrenetal2006_Glencoe,C3,n,tree,E,B,S,39.57,,29.4,,0.47,,,,12.71,3.24,,,,,,,-27.92,, -Eucalyptus dendromorpha,Warrenetal2006_Glencoe,C3,n,tree,E,B,S,40.99,,24.4,,0.40,,,,10.83,2.67,,,,,,,-28.36,, -Eucalyptus dunnii,Warrenetal2006_Glencoe,C3,n,tree,E,B,S,57.41,,20.4,,0.32,,,,12.27,2.16,,,,,,,-30.33,, -Eucalyptus elata,Warrenetal2006_Glencoe,C3,n,tree,E,B,S,46.9986,,16.8788,,0.36482,,,,11.47905,2.4321,,,,,,,-30.06335,, -Eucalyptus fastigata,Warrenetal2006_Glencoe,C3,n,tree,E,B,S,49.98,,28.6,,0.38,,,,8.63,1.73,,,,,,,-29.43,, -Eucalyptus fraxinoides,Warrenetal2006_Glencoe,C3,n,tree,E,B,S,32.27,,27.1,,0.49,,,,10.00,3.10,,,,,,,-28.66,, -Eucalyptus globulus ssp. globulus,Warrenetal2006_Glencoe,C3,n,tree,E,B,S,28.24,,46.6,,0.57,,,,10.62,3.78,,,,,,,-28.70,, -Eucalyptus grandis,Warrenetal2006_Glencoe,C3,n,tree,E,B,S,61.95,,40.2,,0.31,,,,12.64,2.05,,,,,,,-29.69,, -Eucalyptus melliodora,Warrenetal2006_Glencoe,C3,n,tree,E,B,S,40.97,,16.3,,0.41,,,,10.98,2.68,,,,,,,-30.69,, -Eucalyptus muellerana,Warrenetal2006_Glencoe,C3,n,tree,E,B,S,46.05,,30.7,,0.40,,,,9.16,2.10,,,,,,,-29.95,, -Eucalyptus nitens,Warrenetal2006_Glencoe,C3,n,tree,E,B,S,32.17,,26.2,,0.41,,,,13.08,4.07,,,,,,,-28.20,, -Eucalyptus obliqua,Warrenetal2006_Glencoe,C3,n,tree,E,B,S,45.3512,,42.1502,,0.3906,,,,11.00373333,2.488243333,,,,,,,-29.4174,, -Eucalyptus oreades,Warrenetal2006_Glencoe,C3,n,tree,E,B,S,37.14,,34.4,,0.40,,,,14.33,3.87,,,,,,,-28.90,, -Eucalyptus paniculata,Warrenetal2006_Glencoe,C3,n,tree,E,B,S,44.07,,27.7,,0.40,,,,8.64,1.96,,,,,,,-30.12,, -Eucalyptus quadrangulata,Warrenetal2006_Glencoe,C3,n,tree,E,B,S,38.77,,23.1,,0.39,,,,8.19,2.11,,,,,,,-31.65,, -Eucalyptus regnans,Warrenetal2006_Glencoe,C3,n,tree,E,B,S,48.97,,31.2,,0.37,,,,11.91,2.44,,,,,,,-28.10,, -Eucalyptus saligna,Warrenetal2006_Glencoe,C3,n,tree,E,B,S,57.91076667,,34.2368,,0.368766667,,,,12.4,2.207093333,,,,,,,-29.60616667,, -Eucalyptus sieberi,Warrenetal2006_Glencoe,C3,n,tree,E,B,S,36.81,,26.8,,0.42,,,,12.96,3.51,,,,,,,-29.64,, -Eucalyptus smithii,Warrenetal2006_Glencoe,C3,n,tree,E,B,S,46.87,,16.4,,0.32,,,,11.95,2.58,,,,,,,-29.25,, -Eucalyptus tereticornis,Warrenetal2006_Glencoe,C3,n,tree,E,B,S,41.21,,22.9,,0.42,,,,11.13,2.71,,,,,,,-29.92,, -Eucalyptus triflora,Warrenetal2006_Glencoe,C3,n,tree,E,B,S,29.63,,25.2,,0.57,,,,11.01,3.53,,,,,,,-29.15,, -Eucalyptus viminalis,Warrenetal2006_Glencoe,C3,n,tree,E,B,S,48.71645,,32.4122,,0.3304,,,,13.91075,2.88018,,,,,,,-30.07195,, -Eucalyptus badgensis,Warrenetal2006_MtWorth,C3,n,tree,E,B,S,50.11,,9.4,,0.38,,,,16.78,3.35,,,,,,,-30.18,, -Eucalyptus benthamii var. benthamii,Warrenetal2006_MtWorth,C3,n,tree,E,B,S,74.82,,16.9,,0.30,,,,19.10,2.55,,,,,,,-31.07,, -Eucalyptus bosistoana,Warrenetal2006_MtWorth,C3,n,tree,E,B,S,57.39,,17.8,,0.35,,,,14.86,2.59,,,,,,,-30.51,, -Eucalyptus botryoides,Warrenetal2006_MtWorth,C3,n,tree,E,B,S,57.56,,32.7,,0.37,,,,16.07,2.82,,,,,,,-29.29,, -Eucalyptus brookerana,Warrenetal2006_MtWorth,C3,n,tree,E,B,S,52.90,,19.2,,0.40,,,,16.35,3.11,,,,,,,-28.17,, -Eucalyptus cameronii,Warrenetal2006_MtWorth,C3,n,tree,E,B,S,54.69,,16.8,,0.34,,,,13.39,2.53,,,,,,,-27.72,, -Eucalyptus cypellocarpa,Warrenetal2006_MtWorth,C3,n,tree,E,B,S,51.33,,45.1,,0.46,,,,13.56,2.65,,,,,,,-29.34,, -Eucalyptus delegatensis,Warrenetal2006_MtWorth,C3,n,tree,E,B,S,46.42,,28.8,,0.43,,,,16.52,3.57,,,,,,,-29.39,, -Eucalyptus dendromorpha,Warrenetal2006_MtWorth,C3,n,tree,E,B,S,46.28,,18.5,,0.43,,,,15.76,3.45,,,,,,,-28.95,, -Eucalyptus dunnii,Warrenetal2006_MtWorth,C3,n,tree,E,B,S,72.18,,30.5,,0.31,,,,20.41,2.85,,,,,,,-29.37,, -Eucalyptus elata,Warrenetal2006_MtWorth,C3,n,tree,E,B,S,81.14855,,15.71795,,0.2946,,,,18.97315,2.401295,,,,,,,-31.5361,, -Eucalyptus fastigata,Warrenetal2006_MtWorth,C3,n,tree,E,B,S,71.86,,34.4,,0.33,,,,18.19,2.55,,,,,,,-29.63,, -Eucalyptus fraxinoides,Warrenetal2006_MtWorth,C3,n,tree,E,B,S,44.09,,24.5,,0.38,,,,14.64,3.32,,,,,,,-28.27,, -Eucalyptus globulus ssp. globulus,Warrenetal2006_MtWorth,C3,n,tree,E,B,S,36.48,,39.1,,0.51,,,,12.78,3.51,,,,,,,-29.14,, -Eucalyptus grandis,Warrenetal2006_MtWorth,C3,n,tree,E,B,S,69.79,,23.6,,0.33,,,,19.61,2.84,,,,,,,-30.08,, -Eucalyptus melliodora,Warrenetal2006_MtWorth,C3,n,tree,E,B,S,59.37,,29.7,,0.39,,,,17.42,2.94,,,,,,,-29.56,, -Eucalyptus muellerana,Warrenetal2006_MtWorth,C3,n,tree,E,B,S,64.57,,24.9,,0.36,,,,14.91,2.35,,,,,,,-30.00,, -Eucalyptus nitens,Warrenetal2006_MtWorth,C3,n,tree,E,B,S,42.79,,37.4,,0.40,,,,18.10,4.25,,,,,,,-29.85,, -Eucalyptus obliqua,Warrenetal2006_MtWorth,C3,n,tree,E,B,S,52.4714,,35.74566667,,0.3956,,,,16.47403333,3.15181,,,,,,,-29.36633333,, -Eucalyptus oreades,Warrenetal2006_MtWorth,C3,n,tree,E,B,S,40.52,,25.8,,0.51,,,,14.66,3.61,,,,,,,-29.68,, -Eucalyptus paniculata,Warrenetal2006_MtWorth,C3,n,tree,E,B,S,71.38,,23.6,,0.33,,,,15.23,2.14,,,,,,,-30.35,, -Eucalyptus quadrangulata,Warrenetal2006_MtWorth,C3,n,tree,E,B,S,55.46,,21.2,,0.38,,,,13.85,2.50,,,,,,,-31.48,, -Eucalyptus regnans,Warrenetal2006_MtWorth,C3,n,tree,E,B,S,60.11,,39.6,,0.33,,,,18.75,3.12,,,,,,,-30.59,, -Eucalyptus saligna,Warrenetal2006_MtWorth,C3,n,tree,E,B,S,68.5335,,36.8036,,0.334933333,,,,18.0973,2.80614,,,,,,,-29.78386667,, -Eucalyptus sieberi,Warrenetal2006_MtWorth,C3,n,tree,E,B,S,42.91,,23.2,,0.48,,,,13.89,3.27,,,,,,,-28.30,, -Eucalyptus smithii,Warrenetal2006_MtWorth,C3,n,tree,E,B,S,64.26,,18.3,,0.34,,,,17.98,2.82,,,,,,,-31.26,, -Eucalyptus tereticornis,Warrenetal2006_MtWorth,C3,n,tree,E,B,S,56.84,,20.2,,0.28,,,,18.53,3.26,,,,,,,-31.03,, -Eucalyptus triflora,Warrenetal2006_MtWorth,C3,n,tree,E,B,S,37.73,,24.4,,0.52,,,,14.62,3.87,,,,,,,-29.37,, -Eucalyptus viminalis,Warrenetal2006_MtWorth,C3,n,tree,E,B,S,63.8247,,26.24535,,0.2897,,,,19.31655,3.211695,,,,,,,-30.28215,, -Acacia concurrens,Westman&Rogers1977_Stradbroke,,,,,,,,,,,,,0.60,,2.10,,0.04,,,,,,,, -Banksia aemula,Westman&Rogers1977_Stradbroke,,,,,,,,533.863,6.42,,,,0.40,2.14,0.70,3.74,0.05,0.27,,,,,,, -Caustis blakeii,Westman&Rogers1977_Stradbroke,,,,,,,,,,,,,0.40,,1.40,,0.06,,,,,,,, -Eucalyptus signata,Westman&Rogers1977_Stradbroke,,,,,,,,162.771,14,,,,0.50,0.81,1.30,2.12,0.08,0.13,,,,,,, -Eucalyptus umbra ssp. Umbra,Westman&Rogers1977_Stradbroke,,,,,,,,284.69,7.74,,,,0.60,1.71,1.25,3.56,0.08,0.23,,,,,,, -Hibbertia vestita,Westman&Rogers1977_Stradbroke,,,,,,,,,,,,,0.90,,2.00,,0.08,,,,,,,, -Imperata cylindrica,Westman&Rogers1977_Stradbroke,,,,,,,,,,,,,0.50,,0.60,,0.06,,,,,,,, -Lepidosperma laterale,Westman&Rogers1977_Stradbroke,,,,,,,,,,,,,0.40,,0.30,,0.02,,,,,,,, -Leucopogon margarodes,Westman&Rogers1977_Stradbroke,,,,,,,,,,,,,0.50,,1.60,,0.07,,,,,,,, -Lomandra longifolia,Westman&Rogers1977_Stradbroke,,,,,,,,,,,,,0.70,,1.80,,0.06,,,,,,,, -monotoca scoparia,Westman&Rogers1977_Stradbroke,,,,,,,,,,,,,0.60,,1.20,,0.04,,,,,,,, -Persoonia virgata,Westman&Rogers1977_Stradbroke,,,,,,,,,,,,,0.50,,1.30,,0.08,,,,,,,, -Petrophile sessilis,Westman&Rogers1977_Stradbroke,,,,,,,,,,,,,0.30,,0.80,,0.07,,,,,,,, -Pteridium esculentum,Westman&Rogers1977_Stradbroke,,,,,,,,,,,,,0.90,,1.70,,0.10,,,,,,,, -Pultenaea villosa,Westman&Rogers1977_Stradbroke,,,,,,,,,,,,,0.60,,2.60,,0.09,,,,,,,, -Tristania conferta,Westman&Rogers1977_Stradbroke,,,,,,,,,,,,,0.80,,1.60,,0.08,,,,,,,, diff --git a/data/Richards_2008/metadata.yml b/data/Richards_2008/metadata.yml deleted file mode 100644 index 1532a9197..000000000 --- a/data/Richards_2008/metadata.yml +++ /dev/null @@ -1,559 +0,0 @@ -source: - primary: - key: Richards_2008 - bibtype: Unpublished - author: Ian Wright - year: 2008 - title: "Unpublished data: OzGLOP compilation" -people: -- name: Ian Wright - institution: Macquarie University - role: collector, lab_leader, contact, contributor -- name: Anna Richards - institution: CSIRO - role: collector -dataset: - year_collected_start: 2008 - year_collected_end: 2008 - description: OzGlop data compiled by Anna Richards for Ian Wright - collection_type: literature, field - sample_age_class: adult_assumed - sampling_strategy: unknown - original_file: Extra ozglop data OCT07 (iAN).xls - notes: NA x -sites: - Adams1984_BigCkBasin: - longitude (deg): 145.75 - latitude (deg): -37.867 - description: unknown - Ahton1976_DrySclerophyll: - longitude (deg): 145.8 - latitude (deg): -37.983 - description: unknown - Ahton1976_Rainforest: - longitude (deg): 145.8 - latitude (deg): -37.983 - description: unknown - Ahton1976_WetSclerophyll: - longitude (deg): 145.8 - latitude (deg): -37.983 - description: unknown - Ashton1975_WallabyCk: - longitude (deg): .na - latitude (deg): .na - description: unknown - Attiwill1980_MtDisappointment: - longitude (deg): .na - latitude (deg): .na - description: unknown - Bell1985_Weipa: - longitude (deg): .na - latitude (deg): .na - description: unknown - Bennett1996_Yanakie: - longitude (deg): .na - latitude (deg): .na - description: unknown - BevegeandJohnston1978 _Millmerran: - longitude (deg): .na - latitude (deg): .na - description: unknown - BirkandTurner1992_WeddingBells: - longitude (deg): 153.117 - latitude (deg): -30.133 - description: unknown - Choatetal2006_ManyPeaks: - longitude (deg): 145.75 - latitude (deg): -19.18333 - description: unknown - Cromeretal1975_Morwell: - longitude (deg): 146.25 - latitude (deg): -38.333 - description: unknown - Falsterunpub_WallabyCk: - longitude (deg): .na - latitude (deg): .na - description: unknown - Feller1980_MaroondahEO: - longitude (deg): 145.583 - latitude (deg): -37.633 - description: unknown - Feller1980_MaroondahER: - longitude (deg): 145.583 - latitude (deg): -37.633 - description: unknown - Hatch1955_Dwellingup: - longitude (deg): 116.033 - latitude (deg): -32.7833 - description: unknown - Hopmansetal1993_Maramingo: - longitude (deg): 149.55 - latitude (deg): -37.4167 - description: unknown - Lambert1979thesis_BagoSF: - longitude (deg): 141.1 - latitude (deg): -35.6 - description: unknown - Lambert1979thesis_LidsdaleSF: - longitude (deg): 150.0667 - latitude (deg): -33.45 - description: unknown - Leigh&Nicotra2003_LakeTyrrell: - longitude (deg): .na - latitude (deg): .na - description: unknown - Leigh2006_ACT: - longitude (deg): .na - latitude (deg): .na - description: unknown - Leishmanetal2007_BlueMtns: - longitude (deg): .na - latitude (deg): .na - description: unknown - Leishmanetal2007_CPW: - longitude (deg): .na - latitude (deg): .na - description: unknown - Leishmanetal2007_Dorrigo: - longitude (deg): .na - latitude (deg): .na - description: unknown - Leishmanetal2007_Haselhurst: - longitude (deg): .na - latitude (deg): .na - description: unknown - Leishmanetal2007_HS: - longitude (deg): .na - latitude (deg): .na - description: unknown - Leishmanetal2007_Hunter Valley: - longitude (deg): .na - latitude (deg): .na - description: unknown - Leuningetal1991_Toolara: - longitude (deg): 152.75 - latitude (deg): -26.2 - description: unknown - Marsh&Adams1995_Moormung: - longitude (deg): 147.633 - latitude (deg): -37.8167 - description: unknown - Meakinsunpub_Brindabella1: - longitude (deg): .na - latitude (deg): .na - description: unknown - Meakinsunpub_Brindabella2: - longitude (deg): .na - latitude (deg): .na - description: unknown - Meakinsunpub_Brindabella3: - longitude (deg): .na - latitude (deg): .na - description: unknown - Mooreetal1967_Meandarra: - longitude (deg): 145.75 - latitude (deg): -27.283 - description: unknown - Pearcy1987_CurtinFig: - longitude (deg): 145.5667 - latitude (deg): -17 - description: unknown - Peetersetal2006_BunyipPk: - longitude (deg): 145.8 - latitude (deg): -37.983 - description: unknown - Read&Sanson2003_MelbBotGardens: - longitude (deg): 145 - latitude (deg): -37.1333 - description: unknown - RichardsAustralia_Hooppineplantation25: - longitude (deg): 151.922 - latitude (deg): -26.942 - description: unknown - RichardsAustralia_Hooppineplantation34: - longitude (deg): 152.001 - latitude (deg): -26.792 - description: unknown - RichardsAustralia_Hooppineplantation50: - longitude (deg): 151.878 - latitude (deg): -27.022 - description: unknown - RichardsAustralia_Hooppineplantation63: - longitude (deg): 151.96 - latitude (deg): -26.876 - description: unknown - RichardsAustralia_Maleny: - longitude (deg): 152.867 - latitude (deg): -26.75 - description: unknown - RichardsAustralia_NorthQueensland1: - longitude (deg): 145.433 - latitude (deg): -16.133 - description: unknown - RichardsAustralia_NorthQueensland2: - longitude (deg): 145.633 - latitude (deg): -17.283 - description: unknown - RichardsAustralia_NorthQueensland3: - longitude (deg): 145.433 - latitude (deg): -16.1 - description: unknown - SpechtandTurner2006_JohnstonsScrub: - longitude (deg): .na - latitude (deg): .na - description: unknown - SpechtandTurner2006_RockyCrk: - longitude (deg): .na - latitude (deg): .na - description: unknown - TurnerandLambert1983_Conglomerate: - longitude (deg): .na - latitude (deg): .na - description: unknown - Warrenetal2006_Glencoe: - longitude (deg): 147.05 - latitude (deg): -38.267 - description: unknown - Warrenetal2006_MtWorth: - longitude (deg): 145.983 - latitude (deg): -38.317 - description: unknown - Westman&Rogers1977_Stradbroke: - longitude (deg): 153.5 - latitude (deg): -27.5 - description: unknown -config: - data_is_long_format: no - variable_match: - species_name: name_original - site_name: site - custom_R_code: data %>% mutate(`SLA (cm2/g)` = ifelse(is.na(`SLA (cm2/g)`), (1/`LMA - (g/m2)`)* 10000, `SLA (cm2/g)`), `Rd (umol m-2 s-1)` = - `Rd (umol m-2 s-1)`) -traits: -- var_in: photosynthetic pathway - unit_in: .na - trait_name: photosynthetic_pathway - value_type: expert_mean - replicates: .na - methods: unknown -- var_in: Nfixer - unit_in: .na - trait_name: nitrogen_fixing - value_type: expert_mean - replicates: .na - methods: unknown -- var_in: GF - unit_in: .na - trait_name: plant_growth_form - value_type: expert_mean - replicates: .na - methods: unknown -- var_in: DecEv - unit_in: .na - trait_name: leaf_phenology - value_type: expert_mean - replicates: .na - methods: unknown -- var_in: LfType - unit_in: .na - trait_name: leaf_type - value_type: expert_mean - replicates: .na - methods: unknown -- var_in: LfForm - unit_in: .na - trait_name: leaf_compoundness - value_type: expert_mean - replicates: .na - methods: unknown -- var_in: SLA (cm2/g) - unit_in: cm2/g - trait_name: specific_leaf_area - value_type: unknown - replicates: unknown - methods: unknown -- var_in: LfSize (cm2) - unit_in: cm2 - trait_name: leaf_area - value_type: unknown - replicates: unknown - methods: unknown -- var_in: leaf longevity - unit_in: month - trait_name: leaf_lifespan - value_type: unknown - replicates: unknown - methods: unknown -- var_in: thickness (microns) - unit_in: mm - trait_name: leaf_thickness - value_type: unknown - replicates: unknown - methods: unknown -- var_in: water content (%) - unit_in: '%' - trait_name: leaf_water_content_per_mass - value_type: unknown - replicates: unknown - methods: unknown -- var_in: k_mass - unit_in: '%' - trait_name: leaf_K_per_dry_mass - value_type: unknown - replicates: unknown - methods: unknown -- var_in: k_area - unit_in: g/m2 - trait_name: leaf_K_per_area - value_type: unknown - replicates: unknown - methods: unknown -- var_in: n_mass - unit_in: mg/g - trait_name: leaf_N_per_dry_mass - value_type: unknown - replicates: unknown - methods: unknown -- var_in: n_area - unit_in: g/m2 - trait_name: leaf_N_per_area - value_type: unknown - replicates: unknown - methods: unknown -- var_in: p_mass - unit_in: '%' - trait_name: leaf_P_per_dry_mass - value_type: unknown - replicates: unknown - methods: unknown -- var_in: p_area - unit_in: g/m2 - trait_name: leaf_P_per_area - value_type: unknown - replicates: unknown - methods: unknown -- var_in: amass (nmol g-1 s-1) - unit_in: nmolCO2/g/s - trait_name: photosynthetic_rate_per_dry_mass - value_type: unknown - replicates: unknown - methods: unknown -- var_in: aarea (umolm-2s-1) - unit_in: umolCO2/m2/s - trait_name: photosynthetic_rate_per_area - value_type: unknown - replicates: unknown - methods: unknown -- var_in: gs (molm-2s-1) - unit_in: molH2O/m2/s - trait_name: stomatal_conductance_per_area - value_type: unknown - replicates: unknown - methods: unknown -- var_in: Rd (umol m-2 s-1) - unit_in: umolCO2/m2/s - trait_name: leaf_dark_respiration_per_area - value_type: unknown - replicates: unknown - methods: unknown -- var_in: 13-C - unit_in: per mille - trait_name: leaf_delta13C - value_type: unknown - replicates: unknown - methods: unknown -- var_in: 15-N - unit_in: per mille - trait_name: leaf_delta15N - value_type: unknown - replicates: unknown - methods: unknown -- var_in: height - unit_in: m - trait_name: plant_height - value_type: unknown - replicates: unknown - methods: unknown -substitutions: -- trait_name: leaf_type - find: B - replace: broadleaf -- trait_name: leaf_type - find: 'N' - replace: needle -- trait_name: leaf_compoundness - find: C - replace: compound -- trait_name: leaf_compoundness - find: S - replace: simple -- trait_name: leaf_compoundness - find: s - replace: simple -- trait_name: leaf_phenology - find: d - replace: deciduous -- trait_name: leaf_phenology - find: D - replace: deciduous -- trait_name: leaf_phenology - find: E - replace: evergreen -- trait_name: nitrogen_fixing - find: 'n' - replace: '0' -- trait_name: nitrogen_fixing - find: 'N' - replace: '0' -- trait_name: nitrogen_fixing - find: 'y' - replace: '1' -- trait_name: nitrogen_fixing - find: 'Y' - replace: '1' -- trait_name: plant_growth_form - find: vine - replace: climber -- trait_name: plant_growth_form - find: grass - replace: graminoid -- trait_name: plant_growth_form - find: Grass - replace: graminoid -- trait_name: plant_height - find: 10-15 - replace: '12.5' -- trait_name: plant_height - find: 15-20 - replace: '17.5' -- trait_name: plant_height - find: 20-25 - replace: '22.5' -- trait_name: plant_height - find: 40-45 - replace: '42.5' -taxonomic_updates: -- find: Allocasuarina (?) diminuta - replace: Allocasuarina diminuta - reason: Change spelling to align with APC or ALA species lists (Sam Andrew, 2018-02-07) -- find: Acacia parramatensis - replace: Acacia parramattensis - reason: Change spelling to align with APC or ALA species lists (Sam Andrew, 2018-02-07) -- find: Casuarina leuhmanii - replace: Allocasuarina luehmannii - reason: Change spelling to align with APC or ALA species lists (Sam Andrew, 2018-02-07) -- find: Atherosperma moshatum - replace: Atherosperma moschatum - reason: Change spelling to align with APC or ALA species lists (Sam Andrew, 2018-02-07) -- find: Castanopsermum australe - replace: Castanospermum australe - reason: Change spelling to align with APC or ALA species lists (Sam Andrew, 2018-02-07) -- find: Caustis blakeii - replace: Caustis blakei - reason: Change spelling to align with APC or ALA species lists (Sam Andrew, 2018-02-07) -- find: Dianella caerula - replace: Dianella caerulea - reason: Change spelling to align with APC or ALA species lists (Sam Andrew, 2018-02-07) -- find: Dubosia myoporoides - replace: Duboisia myoporoides - reason: Change spelling to align with APC or ALA species lists (Sam Andrew, 2018-02-07) -- find: Dysoxylun mollissimum - replace: Dysoxylum mollissimum - reason: Change spelling to align with APC or ALA species lists (Sam Andrew, 2018-02-07) -- find: Erythrophloeum chlorostachys - replace: Erythrophleum chlorostachys - reason: Change spelling to align with APC or ALA species lists (Sam Andrew, 2018-02-07) -- find: Eucalyptus badgensis - replace: Eucalyptus badjensis - reason: Change spelling to align with APC or ALA species lists (Sam Andrew, 2018-02-07) -- find: Eucalyptus brookerana - replace: Eucalyptus brookeriana - reason: Change spelling to align with APC or ALA species lists (Sam Andrew, 2018-02-07) -- find: Eucalyptus camadulensis - replace: Eucalyptus camaldulensis - reason: Change spelling to align with APC or ALA species lists (Sam Andrew, 2018-02-07) -- find: Elucalyptus dives - replace: Eucalyptus dives - reason: Change spelling to align with APC or ALA species lists (Sam Andrew, 2018-02-07) -- find: Eucalyptus muellerana - replace: Eucalyptus muelleriana - reason: Change spelling to align with APC or ALA species lists (Sam Andrew, 2018-02-07) -- find: Euclayptus piperita - replace: Eucalyptus piperita - reason: Change spelling to align with APC or ALA species lists (Sam Andrew, 2018-02-07) -- find: Eucalyptus seberi - replace: Eucalyptus sieberi - reason: Change spelling to align with APC or ALA species lists (Sam Andrew, 2018-02-07) -- find: Flindersia shottiana - replace: Flindersia schottiana - reason: Change spelling to align with APC or ALA species lists (Sam Andrew, 2018-02-07) -- find: Hibbertia aspersa - replace: Hibbertia aspera - reason: Change spelling to align with APC or ALA species lists (Sam Andrew, 2018-02-07) -- find: Omalanthus populifolia - replace: Homalanthus populifolius - reason: Change spelling to align with APC or ALA species lists (Sam Andrew, 2018-02-07) -- find: Mirbelia platylaboides - replace: Mirbelia platylobioides - reason: Change spelling to align with APC or ALA species lists (Sam Andrew, 2018-02-07) -- find: Siegesbeckia orientalis - replace: Sigesbeckia orientalis - reason: Change spelling to align with APC or ALA species lists (Sam Andrew, 2018-02-07) -- find: Eucalyptus rossi - replace: Eucalyptus rossii - reason: Change spelling to align with APC or ALA species lists (Sam Andrew, 2018-02-07) -- find: Callitris glauca - replace: Callitris columellaris - reason: Synonym reported by TaxonStand (2018-02-07) -- find: Eucalyptus globulus ssp. globulus - replace: Eucalyptus globulus - reason: Synonym reported by TaxonStand (2018-02-07) -- find: Eucalyptus maculosa - replace: Eucalyptus mannifera - reason: Synonym reported by TaxonStand (2018-02-07) -- find: Austromyrtus bidwillii - replace: Gossia bidwillii - reason: Synonym reported by TaxonStand (2018-02-07) -- find: Tristania conferta - replace: Lophostemon confertus - reason: Synonym reported by TaxonStand (2018-02-07) -- find: Helichrysum dendroideum - replace: Ozothamnus ferrugineus - reason: Synonym reported by TaxonStand (2018-02-07) -- find: Elaeocarpus grandis - replace: Elaeocarpus angustifolius - reason: Synonym reported by TaxonStand (2018-02-08) -- find: Microlaena stipoides - replace: Ehrharta stipoides - reason: Synonym reported by TaxonStand (2018-02-08) -- find: Marsdenia rostrata - replace: Pergularia rostrata - reason: Synonym reported by TaxonStand (2018-02-08) -- find: Oplismenus aemulus - replace: Oplismenus hirtellus - reason: Synonym reported by TaxonStand (2018-02-08) -- find: Eucalyptus gummifera - replace: Corymbia gummifera - reason: Synonym reported by TaxonStand (2018-02-08) -- find: Acmena smithii - replace: Syzygium smithii - reason: Synonym reported by TaxonStand (2018-02-08) -- find: Eucalyptus signata - replace: Eucalyptus racemosa - reason: Synonym reported by TaxonStand (2018-02-08) -- find: Eucalyptus rossii - replace: Eucalyptus racemosa - reason: Synonym reported by TaxonStand (2018-02-08) -- find: Melaleuca leucadendron - replace: Melaleuca leucadendra - reason: typo, align to known species (S Andrew) -- find: Notelea spp - replace: Notelaea sp. - reason: Align with known genus (D Falster, 2019-04-16) -questions: - austraits: This is an unpublished study that is a compilation of lots - of different studies - 3 questions. First, are we certain none of the data from - the original studies is included as well, leading to duplicate entries. Second, - how do we define methods for traits? For several traits, some of the data points form an obvious "outlier" cloud while the remaining values are accurate. It is important that all entries in the data spreadsheet use the same units. - contributors: Some values for leaf_N_per_dry_mass are far lower than values in any other study. Other values seem correct. Can you verify that the units are the same for all entries? - diff --git a/data/Specht_1958/data.csv b/data/Specht_1958/data.csv deleted file mode 100644 index 238e80042..000000000 --- a/data/Specht_1958/data.csv +++ /dev/null @@ -1,23 +0,0 @@ -site,gen spp,GF,DecEv,Nfixer,LfType(N/B),photosynthetic pathway,LMA(g/m2),SLA(cm2/g),Nmass(%),Narea(g/m2),Pmass(%),Parea(g/m2) -Specht_Rundel_Dark_Island_heath,Allocasuarina pusilla,S,E,Y,B,C3,384.6,26.0,1.06,4.08,0.046,0.177 -Specht_Rundel_Dark_Island_heath,Banksia marginata,S,E,N,B,C3,222.2,45.0,0.63,1.40,0.012,0.027 -Specht_Rundel_Dark_Island_heath,Banksia ornata,S,E,N,B,C3,263.2,38.0,0.67,1.76,0.016,0.042 -Specht_Rundel_Dark_Island_heath,Calytrix alpestris,S,E,N,B,C3,476.2,21.0,1.04,4.95,0.045,0.214 -Specht_Rundel_Dark_Island_heath,Hibbertia riparia,S,E,N,B,C3,188.7,53.0,1.08,2.04,0.047,0.089 -Specht_Rundel_Dark_Island_heath,Hibbertia sericea,S,E,N,B,C3,476.2,21.0,1.05,5.00,0.045,0.214 -Specht_Rundel_Dark_Island_heath,Hypolaena fastigiata,G,,N,,,476.2,21.0,0.55,2.62,0.008,0.038 -Specht_Rundel_Dark_Island_heath,Lepidosperma carphoides,G,,N,,C3,434.8,23.0,0.57,2.48,0.019,0.083 -Specht_Rundel_Dark_Island_heath,Lepidosperma laterale,G,,N,,C3,434.8,23.0,0.74,3.22,0.028,0.122 -Specht_Rundel_Dark_Island_heath,Phyllota remota,S,E,Y,B,C3,178.6,56.0,1.43,2.55,0.066,0.118 -Specht_Rundel_Dark_Island_heath,Xanthorrhoea australis,S,E,N,N,C3,555.6,18.0,0.47,2.61,0.014,0.078 -Specht_Rundel_Dark_Island_mallee,Baeckea crassifolia,S,E,N,B,C3,344.8,29.0,0.94,3.24,0.039,0.134 -Specht_Rundel_Dark_Island_mallee,Eucalyptus foecunda,T,E,N,B,C3,333.3,30.0,0.99,3.30,0.052,0.173 -Specht_Rundel_Dark_Island_mallee,Eucalyptus incrassata,T,E,N,B,C3,454.5,22.0,0.78,3.55,0.029,0.132 -Specht_Rundel_Dark_Island_mallee,Hakea muellerana,S,E,N,N,,312.5,32.0,0.54,1.69,0.018,0.056 -Specht_Rundel_Dark_Island_mallee,Lepidosperma laterale,G,,N,,C3,384.6,26.0,0.45,1.73,0.013,0.050 -Specht_Rundel_Dark_Island_mallee,Melaleuca uncinata,S,E,N,N,C3,454.5,22.0,1.25,5.68,0.056,0.255 -Specht_Rundel_Mt_Lofty,Banksia marginata,S,E,N,B,C3,149.3,67.0,0.85,1.27,0.034,0.051 -Specht_Rundel_Mt_Lofty,Eucalyptus baxteri,T,E,N,B,C3,250.0,40.0,0.82,2.05,0.033,0.083 -Specht_Rundel_Mt_Lofty,Eucalyptus obliqua,T,E,N,B,C3,227.3,44.0,0.94,2.14,0.046,0.105 -Specht_Rundel_Mt_Lofty,Lepidosperma semiteres,G,,N,,C3,454.5,22.0,0.55,2.50,0.018,0.082 -Specht_Rundel_Mt_Lofty,Leptospermum myrsinoides,S,E,N,B,C3,149.3,67.0,1.08,1.61,0.047,0.070 diff --git a/data/Specht_1958/metadata.yml b/data/Specht_1958/metadata.yml deleted file mode 100644 index e8cd397ac..000000000 --- a/data/Specht_1958/metadata.yml +++ /dev/null @@ -1,165 +0,0 @@ -source: - primary: - key: Specht_1958 - bibtype: Article - author: RL Specht, P Rayson, ME Jackman - year: 1958 - title: 'Dark Island heath (Ninety-mile plain, South Australia). VI. Pyric succession: - Changes in composition, coverage, dry weight, and mineral nutrient status' - journal: Australian Journal of Botany - volume: 6 - pages: 59 - publisher: CSIRO Publishing - doi: 10.1071/bt9580059 -people: -- name: Ray Specht - institution: University of Adelaide - role: collector, contact, lab_leader -- name: Ian Wright - institution: Macquarie University Sydney - role: contributor -dataset: - year_collected_start: 2004 - year_collected_end: 2004 - description: Specht data from Glopnet dataset - collection_type: field - sample_age_class: adult - sampling_strategy: See referenced manuscript, as there were many components to this - study, each with their own sampling strategy. - original_file: Glopnet - Aust subset for RachG.xls - notes: none -sites: - Specht_Rundel_Dark_Island_heath: - longitude (deg): 140.52 - latitude (deg): -36.1 - description: unknown - Specht_Rundel_Dark_Island_mallee: - longitude (deg): 140.52 - latitude (deg): -36.1 - description: unknown - Specht_Rundel_Mt_Lofty: - longitude (deg): 138.67 - latitude (deg): -34.98 - description: unknown -config: - data_is_long_format: no - variable_match: - species_name: gen spp - site_name: site - custom_R_code: .na -traits: -- var_in: GF - unit_in: .na - trait_name: plant_growth_form - value_type: expert_mean - replicates: .na - methods: expert observation or opinion -- var_in: DecEv - unit_in: .na - trait_name: leaf_phenology - value_type: expert_mean - replicates: .na - methods: expert observation or opinion -- var_in: Nfixer - unit_in: .na - trait_name: nitrogen_fixing - value_type: expert_mean - replicates: .na - methods: expert observation or opinion -- var_in: LfType(N/B) - unit_in: .na - trait_name: leaf_type - value_type: expert_mean - replicates: .na - methods: expert observation or opinion -- var_in: photosynthetic pathway - unit_in: .na - trait_name: photosynthetic_pathway - value_type: expert_mean - replicates: .na - methods: expert observation or opinion -- var_in: SLA(cm2/g) - unit_in: cm2/g - trait_name: specific_leaf_area - value_type: unknown - replicates: unknown - methods: Tops of all plants were harvested from the above quadrats, separated into - species and weighed after drying to constant weight at 95°C. -- var_in: Nmass(%) - unit_in: '%' - trait_name: leaf_N_per_dry_mass - value_type: site_mean - replicates: 1 - methods: The nitrogen analyses of the plant material were made after digesting the - material with concentrated sulphuric acid in the presence of selenium as a catalyst. - Tops of all plants were harvested from the above quadrats, separated into species - and weighed after drying to constant weight at 95°C. Bulked sample. -- var_in: Narea(g/m2) - unit_in: g/m2 - trait_name: leaf_N_per_area - value_type: site_mean - replicates: 1 - methods: The nitrogen analyses of the plant material were made after digesting the - material with concentrated sulphuric acid in the presence of selenium as a catalyst. Bulked sample. -- var_in: Pmass(%) - unit_in: '%' - trait_name: leaf_P_per_dry_mass - value_type: site_mean - replicates: 1 - methods: The analyses of the plant material were all made after a wet digestion - by the three acids, sulphuric, nitric, and perchloric, as described by Piper (1944, - pp. 272-5). The digestion of the resinous species of the heath proved rather difficult. - At least two additions of nitric and sometimes of perchloric acid had to be made - to ensure the complete oxidation of the material. Other material, such as Hibbertia - spp., contained high concentrations of silica (up to 5 per cent.) which was left - as a sludge in the digest and on the Kjeldahl flask. To minimize adsorption of - other compounds on this sludge, the digest, diluted with distilled water, was - boiled gently for some time. Tops of all plants were harvested from the above - quadrats, separated into species and weighed after drying to constant weight at - 95°C. Bulked sample. -- var_in: Parea(g/m2) - unit_in: g/m2 - trait_name: leaf_P_per_area - value_type: site_mean - replicates: 1 - methods: The analyses of the plant material were all made after a wet digestion - by the three acids, sulphuric, nitric, and perchloric, as described by Piper (1944, - pp. 272-5). The digestion of the resinous species of the heath proved rather difficult. - At least two additions of nitric and sometimes of perchloric acid had to be made - to ensure the complete oxidation of the material. Other material, such as Hibbertia - spp., contained high concentrations of silica (up to 5 per cent.) which was left - as a sludge in the digest and on the Kjeldahl flask. To minimize adsorption of - other compounds on this sludge, the digest, diluted with distilled water, was - boiled gently for some time. Bulked sample. -substitutions: -- trait_name: leaf_phenology - find: E - replace: evergreen -- trait_name: nitrogen_fixing - find: 'Y' - replace: '1' -- trait_name: nitrogen_fixing - find: 'N' - replace: '0' -- trait_name: plant_growth_form - find: S - replace: shrub -- trait_name: plant_growth_form - find: G - replace: graminoid -- trait_name: plant_growth_form - find: T - replace: tree -- trait_name: leaf_type - find: B - replace: broadleaf -- trait_name: leaf_type - find: 'N' - replace: needle -taxonomic_updates: -- find: Hakea muellerana - replace: Hakea mitchellii - reason: Change spelling to align with APC or ALA species lists (Sam Andrew, 2018-02-07) -questions: - contributors: What methods were used to determine leaf area? - diff --git a/data/Venn_2011/data.csv b/data/Venn_2011/data.csv deleted file mode 100644 index f49b2c312..000000000 --- a/data/Venn_2011/data.csv +++ /dev/null @@ -1,217 +0,0 @@ -Species,region,seed mass (mg),GF,site,leaf area (mm2),SLA mm2/mg-1,LDMC (mg/g-1),height (cm),notes -Stylidium sp. (aff. graminifolium),Alpine,,Herb,Below Clarke 4,110.075,10.1827012,1403.896104,, -Isolepsis aucklandica,Alpine,,graminoid,Betts Creek,16.97666667,14.41415094,336.5079365,, -Isolepsis crassiuscula,Alpine,,graminoid,Betts Creek,46.6798,18.59752988,295.2941176,, -Myriophyllum pedunculatum subsp. pedunculatum,Alpine,,Herb,Betts Creek,6.398,22.85,147.3684211,, -Carex hebes,Alpine,,graminoid,Between Clarke 3 and 2,168.81,19.09615385,394.6428571,, -Melicytus sp. (Hymenanthera auct.),Alpine,,Shrub,Between Clarke 3 and 2,27.7,12.14912281,296.1038961,, -Schizeilema fragoseum,Alpine,,Herb,Between Clarke 3 and 2,234.781,12.52833511,183.5455436,, -Isolepsis montivaga,Alpine,,graminoid,Charlotte Pass below Mt Stilwell,25.115,11.62731481,284.2105263,, -Juncus antarcticus,Alpine,,graminoid,Charlotte Pass below Mt Stilwell,15.74744444,13.12287037,444.4444444,, -Rytidosperma pumilum,Alpine,,graminoid,Charlotte Pass below Mt Stilwell,35.6148,11.27050633,478.7878788,, -Schoenus calyptratus,Alpine,,graminoid,Charlotte Pass below Mt Stilwell,13.0548,15.7286747,296.4285714,, -Juncus falcatus,Alpine,,graminoid,Charlotte Pass Cafe,119.8731,14.06961268,314.3911439,, -Brachyscome nivalis,Alpine,,Herb,Charlotte Pass Carpark,133.007,12.37911065,193.7875752,, -Gonocarpus montanus,Alpine,,Herb,Charlotte Pass Chairlift,28,11.40271493,303.1550069,, -Rhodanthe anthemoides,Alpine,,Herb,Charlotte Pass Chairlift,27.125,13.49502488,261.038961,, -Brachyscome obovata,Alpine,,Herb,Charlotte Pass Lodge,164.887,9.885305755,22.51012146,, -Carex echinata,Alpine,,graminoid,Charlotte Pass Lodge,158.137,17.74828283,29.89932886,, -Craspedia aurantia,Alpine,,Herb,Charlotte Pass Lodge,837.246,23.73146259,19.93220339,, -Deyeuxia carinata,Alpine,,graminoid,Charlotte Pass Lodge,352.965,12.69200647,32.75618375,, -Geranium antrorsum,Alpine,,Herb,Charlotte Pass Lodge,458.088,14.3556346,25.73387097,, -Herpolirion novae-zelandiae,Alpine,,Herb,Charlotte Pass Lodge,57.6173,14.66089059,30.46511628,, -Luzula modesta,Alpine,,graminoid,Charlotte Pass Lodge,355.7511111,19.58262997,25.37243948,, -Oreobolus distichus,Alpine,,graminoid,Charlotte Pass Lodge,26.1134,7.635497076,34.2,, -Ozothamnus secundiflorus,Alpine,,Shrub,Charlotte Pass Lodge,88.745,13.59035222,32.00980392,, -Podocarpus lawrencei,Alpine,,Shrub,Charlotte Pass Lodge,20.7753,6.995050505,39.6,, -Ranunculus dissectifolius,Alpine,,Herb,Charlotte Pass Lodge,845.9502,8.709463605,22.61993479,, -Tasmannia xerophila subsp. xerophila,Alpine,,Shrub,Charlotte Pass Lodge,503.1498,7.99157878,31.41716567,, -Viola fuscoviolacea,Subalpine,,Herb,Charlotte Pass Lodge,48.753,26.07112299,18.51485149,, -Austrodanthonia alpicola,Alpine,,graminoid,Charlotte Pass Phenology Site,81.899,8.53109375,484.8484848,, -Cardamine lilacina s.l.,Alpine,,Herb,Charlotte Pass Phenology Site,101.652,19.39923664,188.4892086,, -Pratia surrepens s.l.,Alpine,,Herb,Club Lake Creek,43.45244444,14.75743396,31.32387707,, -Brachyscome sp. (aff. tenuiscapa),Alpine,,Herb,Club Lake Creek Pool,217.2,13.78170685,17.45293466,, -Carex canescens,Alpine,,graminoid,Club Lake FF,498.748,19.26412901,30.45882353,, -Epilobium tasmanicum,Alpine,,Herb,Club Lake FF,12.348,16.24789474,23.03030303,, -Euchiton nitidulus,Alpine,,Herb,Club Lake FF,22.8084,30.01105263,20,, -Luzula acutifolia subsp. nana,Alpine,,graminoid,Club Lake FF,31.6989,15.53867647,27.94520548,, -Neopaxia australasica,Alpine,,Herb,Club Lake FF,47.9489,21.12286344,10.46082949,, -Oreobolus pumilio subsp. pumilio,Alpine,,graminoid,Club Lake FF,33.6433,9.293729282,37.31958763,, -Rytidosperma nivicola,Alpine,,graminoid,Club Lake FF,43.9868,10.75471883,32.98387097,, -Geranium potentilloides var.,Alpine,,Herb,Dainers Gap,629.979,12.89091876,261.0576923,, -Linum marginale,Subalpine,,Herb,Dainers Gap,25.9055,18.90912409,240.3508772,, -Ozothamnus sp. (aff. hookeri),Alpine,,Shrub,Dainers Gap,3.4392,5.732,240,, -Scaevola hookeri,Subalpine,,Herb,Dainers Gap carpark,62.3,15.15815085,202.4630542,, -Arthropodium milleflorum,Subalpine,,Herb,Dainers Gap SAG3 Site,1152.9,21.04600219,180.0788955,, -Asperula scoparia,Subalpine,,Herb,Dainers Gap SAG3 Site,2.253,22.53,100,, -Carex appressa,Subalpine,,graminoid,Dainers Gap SAG3 Site,1572.1,17.64026032,390.1926445,, -Derwentia derwentiana subsp. maideniana,Subalpine,,Herb,Dainers Gap SAG3 Site,2005.1898,10.33123705,258.8556949,, -Epilobium sarmentaceum,Alpine,,Herb,Dainers Gap SAG3 Site,114.3,18.17170111,253.6290323,, -Erigeron paludicola,Alpine,,Herb,Dainers Gap SAG3 Site,564,20.23681378,102.0131772,, -Myosotis australis,Subalpine,,Herb,Dainers Gap SAG3 Site,129.2,21.53333333,215.8273381,, -Pimelea axiflora subsp. alpina,Alpine,,Shrub,Dainers Gap SAG3 Site,68.5,19.24157303,289.4308943,, -Stellaria pungens,Subalpine,,Herb,Dainers Gap SAG3 Site,10.5,16.40625,220.6896552,, -Stylidium graminifolium,Subalpine,,Herb,Dainers Gap SAG3 Site,274.125,10.36389414,207.7225131,, -Viola hederacea,Subalpine,,Herb,Dainers Gap SAG3 Site,214.4,19.05777778,284.0909091,, -Xerochrysum bracteatum,Subalpine,,Herb,Dainers Gap SAG3 Site,564.1111111,10.31281739,239.6786758,, -Coprosma niphophila,Alpine,,Shrub,East of main range 500m from junction,9.425,9.921052632,263.8888889,, -Epacris microphylla s.l.,Alpine,,Shrub,Edge of track Mt Kosciuszko,4.1,6.721311475,554.5454545,, -Ewartia nubigena,Alpine,,Shrub,Edge of track Mt Kosciuszko,14.7,19.86486486,411.1111111,, -Leucochrysum albicans subsp. alpinum,Alpine,,Herb,Feldmark,194.1206,21.56895556,132.3529412,, -Ranunculus acrophilus,Alpine,,Herb,Feldmark,153.8615,51.28716667,35.29411765,, -Euphrasia collina var. lapidosa,Alpine,,Herb,FMUB1,52.517,17.27529605,26.43478261,, -Agrostis mulleriana dwarf form,Alpine,,graminoid,FMUB2,6.0565,10.26525424,49.16666667,, -Chionohebe densifolia,Alpine,,Shrub,FMUB2,6.893,10.94095238,42,, -Podolepis robusta,Alpine,,Herb,Near Snowy river,3073.8,13.07721761,163.1045729,, -Carpha nivicola,Alpine,,graminoid,On way to Club Lake,142.0231,8.364140165,361.2765957,, -Chionochloa frigida,Alpine,,graminoid,On way to Club Lake,2562.100778,6.981201029,474.7736093,, -Dichosciadium ranunculaceum var. ranunculaceum,Alpine,,Herb,On way to Club Lake,411.387,13.71288667,180,, -Diplaspis nivis,Alpine,,Herb,On way to Club Lake,113106.9082,21381.26809,165.3125,, -Empodisma minus,Alpine,,graminoid,On way to Club Lake,8.782,3.70535865,169.2857143,, -Plantago glacialis,Alpine,,Herb,On way to Club Lake,23.109,8.28265233,398.5714286,, -Ranunculus gunnianus,Alpine,,Herb,On way to Club Lake,811.4869,9.327435632,177.5510204,, -Uncinia sulcata,Alpine,,graminoid,On way to Club Lake,237.72,19.81001667,200,, -Viola betonicifolia subsp. betonicifolia,Alpine,,Herb,On way to Club Lake,177.114,17.17883608,234.3181818,, -Acaena ovina,Subalpine,,Herb,Rennix Walk Car Park,536.4666,9.408393546,386.0528097,, -Wahlenbergia gloriosa,Alpine,,Herb,Saw Pitt Creek Waterfall Walk,73.5655,15.39027197,247.6683938,, -Brachyscome scapigera,Alpine,,Herb,Snow bank1,442.9147,23.3113,124.1830065,, -Caltha introloba,Alpine,,Herb,Snow bank1,188.186,376.372,5.102040816,, -Aciphylla glacialis,Alpine,,Herb,Snowbank below Stillwell,4176.289,7.030789899,255.2642888,, -Celmisia costiniana,Alpine,,Herb,Snowbank below Stillwell,289.666,9.655536667,205.4794521,, -Craspedia lamicola,Alpine,,Herb,Snowbank below Stillwell,1003.4104,20.90438333,112.412178,, -Craspedia maxgrayi,Alpine,,Herb,Snowbank below Stillwell,1041.0999,28.13783514,86.24708625,, -Erigeron bellidiodes,Alpine,,Herb,Snowbank below Stillwell,168.8788,84.4394,30.76923077,, -Erigeron setosus,Alpine,,Herb,Snowbank below Stillwell,19.8564,7.69627907,286.6666667,, -Euphrasia collina var. diversicolor,Alpine,,Herb,Snowbank below Stillwell,47.746,9.362039216,283.3333333,, -Oreomyrrhis pulvinifica,Alpine,,Herb,Snowbank below Stillwell,39.6715,14.8582397,205.3846154,, -Baeckea utilis var. utilis,Alpine,,Shrub,Snowy River Phebalium heath,7.4,7.872340426,408.6956522,, -Derwentia derwentiana,Subalpine,,Herb,Snowy River Phebalium heath,1565.2,8.919026725,297.0379147,, -Epacris paludosa,Alpine,,Shrub,Snowy River Phebalium heath,11.5,9.829059829,433.3333333,, -Gonocarpus montanus,Alpine,,Herb,Snowy River Phebalium heath,11.1,18.81355932,256.5217391,, -Olearia phlogopappa var. flavescens,Alpine,,Shrub,Snowy River Phebalium heath,85.4,9.046610169,412.2270742,, -Ozothamnus rosmarinifolius,Subalpine,,Shrub,Snowy River Phebalium heath,29.8,8.739002933,383.1460674,, -Pimelea ligustrina subsp. ciliata,Alpine,,Shrub,Snowy River Phebalium heath,231.2,13.31797235,281.8181818,, -Podocarpus lawrencei,Alpine,,Shrub,Snowy River Phebalium heath,10.1,4.570135747,442,, -Baeckea gunniana,Alpine,,Shrub,Spencers Creek,2.8925,20.66071429,175,, -Epacris glacialis,Alpine,,Shrub,Spencers Creek,5.05,8.859649123,518.1818182,, -Epacris petrophila,Alpine,,Shrub,Spencers Creek,8.502,18.89333333,642.8571429,, -Kunzea muelleri,Alpine,,Shrub,Spencers Creek,4.487,8.0125,622.2222222,, -Olearia algida,Alpine,,Shrub,Spencers Creek,2.075,9.880952381,350,, -Oschatzia cuneifolia,Alpine,,Herb,Spencers Creek,175.6,,0,, -Pentachondra pumila,Alpine,,Shrub,Spencers Creek,7.535,8.970238095,646.1538462,, -Pimelea alpina,Alpine,,Shrub,Spencers Creek,15.388,11.0705036,365.7894737,, -Plantago alpestris,Alpine,,Herb,Spencers Creek,127.8,,0,, -Richea continentis,Alpine,,Shrub,Spencers Creek,97.8,,0,, -Agrostis muelleriana,Alpine,,graminoid,Start of Club Lake Creek,31.9484,6.725978947,395.8333333,, -Cardamine robusta,Alpine,,Herb,Start of Club Lake Creek,521.978,43.49816667,68.96551724,, -Craspedia sp. B,Alpine,,Herb,Start of Club Lake Creek,909.721,15.96001228,199.3006993,, -Euphrasia collina subs.glacialis,Alpine,,Herb,Start of Club Lake Creek,46.9278,29.89031847,65.41666667,, -Luzula australasica,Alpine,,graminoid,Start of Club Lake Creek,47.365,7.354813665,429.3333333,, -Plantago euryphylla,Alpine,,Herb,Start of Club Lake Creek,40614.861,1269.214394,196.3190184,, -Poa fawcettiae,Alpine,,graminoid,Start of Club Lake Creek,366.146,61.0243,115.3846154,, -Ranunculus niphophilus,Alpine,,Herb,Start of Club Lake Creek,147.5606,10.47271824,230.9836066,, -Rytidosperma nudiflorum,Alpine,,graminoid,Start of Club Lake Creek,136.254,45.41806667,63.82978723,, -Stackhousia pulvinarus,Alpine,,graminoid,Start of Club Lake Creek,12.224,5.963073171,512.5,, -Luzula acutifolia subsp. nana,Alpine,,graminoid,Stillwell Basin,33.8254,10.00751479,422.5,, -Poa hiemata,Alpine,,graminoid,Stillwell Basin,30.282,,0,, -Grevillea australis,Alpine,,Shrub,Stillwell Path between chairlift and Charlotte Pass,24.6,5.454545455,406.3063063,, -Orites lancifolia,Alpine,,Shrub,Stillwell Path between chairlift and Charlotte Pass,189.7346,4.179176211,485.042735,, -Oxylobium ellipticum,Alpine,,Shrub,Stillwell Path between chairlift and Charlotte Pass,44.9,12.93948127,394.3181818,, -Hovea montana,Alpine,,Shrub,Stillwell Path between chairlift and Charlotte Pass,52.028,5.314402451,540.8839779,, -Olearia phlogopappa var. subrepanda,Alpine,,Shrub,Stillwell Path between chairlift and Charlotte Pass,15.9,12.04545455,425.8064516,, -Luzula novae-cambriae,Alpine,,graminoid,Stillwell Path chairlift,470.0769,14.46835642,326.2048193,, -Phebalium ovatifolium,Alpine,,Shrub,Stillwell Path chairlift,44.0702,3.585858421,456.8773234,, -Prostanthera cuneata,Alpine,,Shrub,Stillwell Path chairlift,16.3,6.70781893,391.9354839,, -Scleranthus biflorus,Alpine,,Herb,Tall alpine herbfield near Club Lake,6.1402,12.2804,125,, -Carex gaudichaudiana,Alpine,,graminoid,Tall alpine herbfield next to snowbank,314.1021,78.525525,66.66666667,, -Drosera arcturi,Alpine,,Herb,Tall alpine herbfield next to snowbank,64.073,16.55633075,351.8181818,, -Epilobium gunnianum,Alpine,,Herb,Tall alpine herbfield next to snowbank,214.9444,53.7361,81.63265306,, -Prasophyllum alpestre,Alpine,,Herb,Tall alpine herbfield next to snowbank,1181.183,18.74893968,137.5545852,, -Senecio pinnatifolius var. pleiocephalus,Alpine,,Herb,Tall alpine herbfield next to snowbank,194.4204,194.4204,12.34567901,, -Acaena sp.,Alpine,,Herb,Tall alpine herbfield next to Snowy River1,46.1727,19.98818182,385,, -Astelia alpina var. novae-hollandiae,Alpine,,Herb,Tall alpine herbfield next to Snowy River1,1516.4802,9.190789091,226.6483516,, -Australopyrum velutinum,Alpine,,graminoid,Tall alpine herbfield next to Snowy River1,303.097,101.0324667,53.57142857,, -Colobanthus nivicola,Alpine,,,Tall alpine herbfield next to Snowy River1,18.8024,12.05282051,222.8571429,, -Cotula alpina,Alpine,,Herb,Tall alpine herbfield next to Snowy River1,39.6281,11.8647006,256.9230769,, -Craspedia alba,Alpine,,Herb,Tall alpine herbfield next to Snowy River1,86.855,18.67849462,258.3333333,, -Gonocarpus micranthus subsp. micranthus,Alpine,,Herb,Tall alpine herbfield next to Snowy River1,6.581,24.37444444,613.6363636,, -Oreomyrrhis ciliata,Alpine,,Herb,Tall alpine herbfield next to Snowy River1,210.061,10.76132172,320,, -Parantennaria uniceps,Alpine,,Herb,Tall alpine herbfield next to Snowy River1,5.245,74.92428571,152.173913,, -Pratia surrepens s.l.,Alpine,,Herb,Tall alpine herbfield next to Snowy River1,20.8636,10.5906599,860.2620087,, -Ranunculus millanii,Alpine,,Herb,Tall alpine herbfield next to Snowy River1,31.4456,12.52812749,278.8888889,, -Senecio pectinatus var. major,Alpine,,Herb,Tall alpine herbfield next to Snowy River1,172.9245,8.68530889,223.7078652,, -Poa saxicola,Alpine,,graminoid,Tall alpine herbfield next to Snowy River2,347.5628,115.8542667,60,, -Ranunculus graniticola,Alpine,,Herb,Tall alpine herbfield next to Snowy River2,394.992,23.23481765,111.8421053,, -Aciphylla simplicifolia,Alpine,,Herb,Tall alpine herbfield raised bog,604.7821,264.0969869,5.571776156,, -Asperula gunnii,Alpine,,Herb,Tall alpine herbfield1,4.141,21.79684211,593.75,, -Carex breviculmis,Alpine,,graminoid,Tall alpine herbfield1,137.2486,16.81968137,354.7826087,, -Euchiton fordianus,Alpine,,Herb,Tall alpine herbfield1,100.964,17.90143617,352.5,, -Erigeron nitidus,Alpine,,Herb,Tall alpine herbfield10,166.4504,10.00302885,291.9298246,, -Leptorhynchos squamatus s.l.,Alpine,,Herb,Tall alpine herbfield10,80.445,10.76911647,373.5,, -Chionogentias muelleriana subsp. alpestris,Alpine,,Herb,Tall alpine herbfield11,28.244,15.26686486,616.6666667,, -Euchiton argentifolius,Alpine,,Herb,Tall alpine herbfield11,20.346,25.11790123,405,, -Oreomyrrhis eriopoda,Alpine,,Herb,Tall alpine herbfield11,834.2065,9.58858046,240.9972299,, -Prasophyllum tadgellianum,Alpine,,Herb,Tall alpine herbfield11,984.32,22.89117209,133.126935,, -Deyeuxia crassiuscula,Alpine,,graminoid,Tall alpine herbfield2,272.449,27.2449,112.5,, -Helichrysum scorpioides,Alpine,,Herb,Tall alpine herbfield3,110.7231,14.62656539,445.2941176,, -Senecio gunnii,Alpine,,Herb,Tall alpine herbfield3,563.237,25.60168182,111.6751269,, -Agrostis meionectes,Alpine,,graminoid,Tall alpine herbfield4,22.844,2.928717949,975,, -Brachysome stolonifera,Alpine,,Herb,Tall alpine herbfield5,46.3554,7.951183533,364.375,, -Craspedia costiniana,Alpine,,Herb,Tall alpine herbfield5,1763.408,22.9013987,103.4328358,, -Microseris lanceolata,Alpine,,Herb,Tall alpine herbfield5,930.388,19.79548936,137.7850163,, -Trisetum spicatum subsp. australiense,Alpine,,graminoid,Tall alpine herbfield5,537.7843,18.54428621,119.3415638,, -Ranunculus muelleri,Alpine,,Herb,Tall alpine herbfield6,316.055,9.295741176,203.5928144,, -Ranunculus anenonemous,Alpine,,Herb,Tall alpine herbfield7,8070.346,5.882176531,225.4354256,, -Neopaxia australasica,Alpine,,Herb,Tall alpine herbfield8,46.568,14.5070405,160.5,, -Poa costiniana,Alpine,,graminoid,Tall alpine herbfield8,131.9108,5.803378795,366.6129032,, -Luzula alpestris,Alpine,,graminoid,Tall alpine herbfield9,480.911,21.8596,244.4444444,, -Wahlenbergia ceracea,Alpine,,Herb,Tall alpine herbfield9,112.356,19.60837696,301.5789474,, -Leucopogon montanus,Alpine,,Shrub,Up Heartbreak Hill,11.82,8.040816327,525,, -Ozothamnus alpinus,Alpine,,Shrub,Up Heartbreak Hill,11.65,6.695402299,470.2702703,, -Dianella tasmanica,Alpine,,Herb,Up Lodge,14362.808,5.548399044,326.675248,, -Acetosella vulgaris,Alpine,0.4732,,,799.18965,,,20, -Agrostis muelleriana,Alpine,0.100694444,,,99,,,20, -Brachyscome sp. (aff. tadgellii),Alpine,,Herb,,125.795,7.642454435,227.6625173,, -Brachyscome spathulata,Alpine,0.239,,,195.3333333,,,30, -Brachysome spatulatha subsp. spathulata,Alpine,,Herb,,160.3296,22.90422857,71.42857143,, -Cardamine robusta,Alpine,0.537777778,,,227.0748299,,,25, -Carex breviculmis,Alpine,1.035185185,,,186.6882667,,,15, -Carex cephalotes,Alpine,0.8344,,,104.2857143,,,20, -Carex gaudichaudiana,Alpine,0.4672,,,372.7272727,,,40, -Celmisia costiniana,Alpine,2.641875,,,428.88,,,15, -Celmisia pugioniformis,Alpine,,Herb,,303.9083,17.87695882,118.8811189,, -Colobanthus nivicola,Alpine,0.049130435,,,5.06,,,2, -Colobanthus pulvinatus,Alpine,,Herb,,1.66,0.458563536,603.3333333,, -Cotula alpina,Alpine,0.2268,,,54.174,,,5, -Craspedia lamicola,Alpine,1.1308,,,1841.565217,,,50, -Epilobium tasmanicum,Alpine,0.044705882,,,10.625,,,5, -Erigeron bellidoides,Alpine,0.248,,,177.65,,,16, -Erigeron nitidus,Alpine,0.764210526,,,160.0484,,,16, -Erigeron setosus,Alpine,0.2004,,,27.77777778,,,2, -Euchiton argentifolius,Alpine,0.026052632,,,42.30769231,,,8, -Euchiton fordianus,Alpine,0.087131904,,,40.113,,,3, -Euphrasia alsa,Alpine,,Herb,,16.3301,7.038836207,773.3333333,, -Euphrasia collina sub sp diversitcolour,Alpine,0.275,,,62.625,,,30, -Ewartia nubigena,Alpine,45.89333333,,,10.804,,,2, -Gonocarpus montanus,Alpine,0.703015873,,,27.77777778,,,15, -Helichrysum scorpioides,Alpine,0.2525,,,162.12045,,,10, -Leptorynchus squamatus,Alpine,0.114285714,,,45.2984,,,25, -Luzula acutifolia subsp. nana,Alpine,0.3304,,,39.95261905,,,10,I took this out of the analyses -Luzula australasica subsp dura,Alpine,0.2572,,,192.1875,,,20, -Luzula modesta,Alpine,0.427083333,,,465.6153846,,,30, -Neopaxia australasica,Alpine,0.7522,,,41.36,,,3, -Oreomyrrhis eriopoda (pinnae),Alpine,4.5388,,,81,,,30, -Oreomyrrhis pulvinifica (pinnae),Alpine,1.0404,,,42.08333333,,,10, -Plantago glacialis,Alpine,0.24,,,37.36,,,3, -Plantago muelleri,Alpine,,Herb,,487.3337,8.347613909,180.1851852,, -Poa costiniana,Alpine,0.1975,,,386.2992,,,40, -Poa fawcettiae,Alpine,0.359090909,,,137.7307,,,60, -Poa hiemata,Alpine,0.35,,,57.31733333,,,60, -Ranunculus acrophilus,Alpine,1.076,,,61.66666667,,,16, -Ranunculus anemoneus,Alpine,2.5468,,,5378.397213,,,35, -Ranunculus dissectifolius,Alpine,1.7484,,,312,,,15, -Ranunculus niphophilus,Alpine,1.6444,,,145,,,15, -Rytidosperma nudiflorum,Alpine,1.275,,,46.85714286,,,40, -Senecio pinnatifolius var. pleicephalus,Alpine,0.2884,,,97.2,,,45, -Stackhousia pulvinaris,Alpine,2.6352,,,6.06,,,5, -Trisetum spicatum subsp australiense,Alpine,0.3772,,,463.0588235,,,40, diff --git a/data/Venn_2011/metadata.yml b/data/Venn_2011/metadata.yml deleted file mode 100644 index 098fdb535..000000000 --- a/data/Venn_2011/metadata.yml +++ /dev/null @@ -1,545 +0,0 @@ -source: - primary: - key: Venn_2011 - bibtype: Article - author: Susanna E. Venn, Ken Green, Catherine M. Pickering, John W. Morgan - year: 2011 - title: Using plant functional traits to explain community composition across a - strong environmental filter in Australian alpine snowpatches - journal: Plant Ecology - volume: 212 - pages: 1491--1499 - doi: 10.1007/s11258-011-9923-1 -people: -- name: Susanna Venn - institution: La Trobe University - role: collector, contact -- name: .na - institution: .na - role: lab_leader -- name: Rachael Gallagher - institution: Macquarie University Sydney - role: contributor -dataset: - year_collected_start: 2003-2008 - year_collected_end: 2003-2008 - description: data for traits from alpine zone from Susanna Venn - collection_type: field - sample_age_class: adult - sampling_strategy: The study was conducted across seven snowpatches of the Main - Range in the alpine area of Kosciuszko National Park, Snowy Mountains, south-eastern - Australia. The region is characterized by continuous snow cover for up to 4 months - of the year, with the first snowfalls of the season occurring between May and - June. Snowcover in alpine areas may become discontinuous toward the end of October, - although large drifts at high altitudes usually persist until mid November. Snowpatches - on the lee side of the highest ridges can persist into February and occasionally - later. Maximum snow depths from the nearby weekly-monitored snow course in Australia, - Spencers Creek, 1,830 m, show high inter-annual variability, ranging between just - over 360 cm (1981) and 85 cm (2006). However, snow depths in snowpatches can be - up to 600 cm due to steep topography and snow drifting patterns (Costin et al. - 2000). Temperatures in the Snowy Mountains vary considerably with the seasons; - minimum temperatures can be below freezing for up to 6 months per year (Costin - et al. 2000; Venn unpublished data), while maximum temperatures over winter occasionally - reach 10–13 °C (Venn unpublished data). In the snow-free summer months, maximum - temperatures can regularly reach 25 °C and overnight temperatures below 0 °C (Venn - unpublished data). Vegetation types reflect the local topography, aspect, drainage, - and duration of snow cover (Costin et al. 2000); bog and fen communities are in - the lower drainage areas, shrublands on the slopes, tall and short alpine herbfield - on the upper slopes and feldmark on the windswept rocky ridges (Costin et al. - 2000). Highly organic alpine humus soil dominates on all bedrock types and under - most physiographic conditions (Costin 1954; Good 1992). We collected trait data - from 10 to 25 mature individuals of each species during the peak of the 2008/2009 - growing season, in nearby locations in similar landscape positions. Trait data, - including destructive sampling, were not directly measured from plants within - the study plots. We measured three character-based traits (leaf area, plant height, - seed mass) for the 40 species recorded in the quadrats across the seven snowpatches. - We chose these traits based on the individual plant and ecosystem functions in - which they are involved (Leps et al. 2006; Petchey and Gaston 2006) in the context - of small-scale plant community dynamics. In addition, these traits are indicative - of functional characteristics (Mason et al. 2003) and are also directly linked - to ecosystem functioning. - original_file: AusTraits database_SV.xls - notes: Lizzy Wenk changed the longitude for the study site 'Tall alpine herbfield raised bog' from 158.331 to 148.331. -sites: - Below Clarke 4: - elevation (m): 1875 - latitude (deg): -36.434 - longitude (deg): 148.301 - description: unknown - Betts Creek: - latitude (deg): -36.427 - longitude (deg): 148.372 - description: unknown - Between Clarke 3 and 2: - elevation (m): 2034 - latitude (deg): -36.433 - longitude (deg): 148.293 - description: unknown - Charlotte Pass below Mt Stilwell: - latitude (deg): -36.443 - longitude (deg): 148.323 - description: unknown - Charlotte Pass Cafe: - elevation (m): 1681 - latitude (deg): -36.435 - longitude (deg): 148.332 - description: unknown - Charlotte Pass Carpark: - elevation (m): 1804 - latitude (deg): -36.432 - longitude (deg): 148.331 - description: unknown - Charlotte Pass Chairlift: - elevation (m): 1953 - latitude (deg): -36.439 - longitude (deg): 148.324 - description: unknown - Charlotte Pass Lodge: - elevation (m): 1785 - latitude (deg): -36.437 - longitude (deg): 148.335 - description: unknown - Charlotte Pass Phenology Site: - elevation (m): 1870 - latitude (deg): -36.43 - longitude (deg): 148.331 - description: unknown - Club Lake Creek: - elevation (m): 1786 - latitude (deg): -36.43 - longitude (deg): 148.304 - description: unknown - Club Lake Creek Pool: - latitude (deg): -36.428 - longitude (deg): 148.301 - description: unknown - Club Lake FF: - latitude (deg): -36.417 - longitude (deg): 148.286 - description: unknown - Dainers Gap: - elevation (m): 1671 - latitude (deg): -36.376 - longitude (deg): 148.472 - description: unknown - Dainers Gap carpark: - elevation (m): 1688 - latitude (deg): -36.372 - longitude (deg): 148.471 - description: unknown - Dainers Gap SAG3 Site: - elevation (m): 1668 - latitude (deg): -36.376 - longitude (deg): 148.472 - description: unknown - East of main range 500m from junction: - elevation (m): 2121 - latitude (deg): -36.448 - longitude (deg): 148.267 - description: unknown - Edge of track Mt Kosciuszko: - elevation (m): 2234 - latitude (deg): -36.457 - longitude (deg): 148.264 - description: unknown - Feldmark: - elevation (m): 2073 - latitude (deg): -36.406 - longitude (deg): 148.297 - description: unknown - FMUB1: - elevation (m): 2080 - latitude (deg): -36.416 - longitude (deg): 148.286 - description: unknown - FMUB2: - elevation (m): 2109 - latitude (deg): -36.412 - longitude (deg): 148.287 - description: unknown - Near Snowy river: - elevation (m): 1742 - latitude (deg): -36.431 - longitude (deg): 148.319 - description: unknown - On way to Club Lake: - elevation (m): 1901 - latitude (deg): -36.42 - longitude (deg): 148.302 - description: unknown - Rennix Walk Car Park: - elevation (m): 1601 - latitude (deg): -36.361 - longitude (deg): 148.507 - description: unknown - Saw Pitt Creek Waterfall Walk: - elevation (m): 1225 - latitude (deg): -36.345 - longitude (deg): 148.559 - description: unknown - Snow bank1: - elevation (m): 2045 - latitude (deg): -36.447 - longitude (deg): 148.326 - description: unknown - Snowbank below Stillwell: - elevation (m): 1987 - latitude (deg): -36.443 - longitude (deg): 148.326 - description: unknown - Snowy River Phebalium heath: - elevation (m): 1745 - latitude (deg): -36.431 - longitude (deg): 148.322 - description: unknown - Spencers Creek: - elevation (m): 1720 - latitude (deg): -36.429 - longitude (deg): 148.358 - description: unknown - Start of Club Lake Creek: - elevation (m): 1944 - latitude (deg): -36.415 - longitude (deg): 148.292 - description: unknown - Stillwell Basin: - elevation (m): 1989 - latitude (deg): -36.442 - longitude (deg): 148.325 - description: unknown - Stillwell Path between chairlift and Charlotte Pass: - elevation (m): 1924 - latitude (deg): -36.436 - longitude (deg): 148.325 - description: unknown - Stillwell Path chairlift: - latitude (deg): -36.438 - longitude (deg): 148.324 - description: unknown - Tall alpine herbfield near Club Lake: - elevation (m): 1870 - latitude (deg): -36.419 - longitude (deg): 148.294 - description: unknown - Tall alpine herbfield next to snowbank: - elevation (m): 2029 - latitude (deg): -36.448 - longitude (deg): 148.324 - description: unknown - Tall alpine herbfield next to Snowy River1: - elevation (m): 1954 - latitude (deg): -36.459 - longitude (deg): 148.297 - description: unknown - Tall alpine herbfield next to Snowy River2: - elevation (m): 1842 - latitude (deg): -36.42 - longitude (deg): 148.296 - description: unknown - Tall alpine herbfield raised bog: - elevation (m): 2022 - latitude (deg): -36.444 - longitude (deg): 148.331 - description: unknown - Tall alpine herbfield1: - elevation (m): 1943 - latitude (deg): -36.453 - longitude (deg): 148.294 - description: unknown - Tall alpine herbfield10: - elevation (m): 2117 - latitude (deg): -36.404 - longitude (deg): 148.301 - description: unknown - Tall alpine herbfield11: - elevation (m): 2108 - latitude (deg): -36.401 - longitude (deg): 148.305 - description: unknown - Tall alpine herbfield2: - elevation (m): 1928 - latitude (deg): -36.452 - longitude (deg): 148.301 - description: unknown - Tall alpine herbfield3: - elevation (m): 1903 - latitude (deg): -36.452 - longitude (deg): 148.305 - description: unknown - Tall alpine herbfield4: - elevation (m): 1953 - latitude (deg): -36.452 - longitude (deg): 148.298 - description: unknown - Tall alpine herbfield5: - elevation (m): 2047 - latitude (deg): -36.447 - longitude (deg): 148.327 - description: unknown - Tall alpine herbfield6: - elevation (m): 2045 - latitude (deg): -36.447 - longitude (deg): 148.326 - description: unknown - Tall alpine herbfield7: - elevation (m): 1918 - latitude (deg): -36.419 - longitude (deg): 148.301 - description: unknown - Tall alpine herbfield8: - elevation (m): 1884 - latitude (deg): -36.418 - longitude (deg): 148.293 - description: unknown - Tall alpine herbfield9: - elevation (m): 2110 - latitude (deg): -36.404 - longitude (deg): 148.304 - description: unknown - Up Heartbreak Hill: - elevation (m): 1758 - latitude (deg): -36.431 - longitude (deg): 148.323 - description: unknown - Up Lodge: - elevation (m): 1783 - latitude (deg): -36.396 - longitude (deg): 148.404 - description: unknown -config: - data_is_long_format: no - variable_match: - species_name: Species - site_name: site - custom_R_code: .na -traits: -- var_in: region - unit_in: .na - trait_name: .na - value_type: unknown - replicates: unknown - methods: unknown -- var_in: seed mass (mg) - unit_in: mg - trait_name: seed_mass - value_type: multisite_mean - replicates: 10-25 - methods: We measured mean seed mass (lg) of all snowpatch species using seed freshly - collected during the growing season of 2008/2009, stored seed, and seed associated - with herbarium specimens. For species with very light seeds, 10 or 20 seeds were - weighed at a time. Mean seed weight for each species was obtained from up to 25 - replicate weights where enough seed was available. -- var_in: GF - unit_in: .na - trait_name: plant_growth_form - value_type: expert_mean - replicates: .na - methods: unknown -- var_in: leaf area (mm2) - unit_in: mm2 - trait_name: leaf_area - value_type: multisite_mean - replicates: 10-25 - methods: For most species, we collected fresh material from the field during the - growing season of 2008/2009 and scanned up to 25 adult leaves (collected from - a minimum of 10 plants) for each species using the Leaf Area Measurement program - (available from the University of Sheffield, copyright Askew, 2003). Where fresh - material was unavailable, we used herbarium specimens collected from the study - region, housed in either the Kosciuszko Herbarium and the Australian National - Herbarium; these specimens were photocopied or photographed with a scale, and - leaf area was measured using a digital planimeter on enlarged, printed images. -- var_in: SLA mm2/mg-1 - unit_in: mm2/mg - trait_name: specific_leaf_area - value_type: multisite_mean - replicates: 10-25 - methods: For most species, we collected fresh material from the field during the - growing season of 2008/2009 and scanned up to 25 adult leaves (collected from - a minimum of 10 plants) for each species using the Leaf Area Measurement program - (available from the University of Sheffield, copyright Askew, 2003). Where fresh - material was unavailable, we used herbarium specimens collected from the study - region, housed in either the Kosciuszko Herbarium and the Australian National - Herbarium; these specimens were photocopied or photographed with a scale, and - leaf area was measured using a digital planimeter on enlarged, printed images. -- var_in: LDMC (mg/g-1) - unit_in: mg/g - trait_name: leaf_dry_matter_content - value_type: multisite_mean - replicates: 10-25 - methods: For most species, we collected fresh material from the field during the - growing season of 2008/2009 and scanned up to 25 adult leaves (collected from - a minimum of 10 plants) for each species using the Leaf Area Measurement program - (available from the University of Sheffield, copyright Askew, 2003). Where fresh - material was unavailable, we used herbarium specimens collected from the study - region, housed in either the Kosciuszko Herbarium and the Australian National - Herbarium; these specimens were photocopied or photographed with a scale, and - leaf area was measured using a digital planimeter on enlarged, printed images. -- var_in: height (cm) - unit_in: cm - trait_name: plant_height - value_type: expert_mean - replicates: .na - methods: For every species, we used maximum height measurements from the local flora - for this region (Costin et al. 2000). -- var_in: notes - unit_in: .na - trait_name: .na - value_type: unknown - replicates: unknown - methods: unknown -substitutions: -- trait_name: plant_growth_form - find: Grass - replace: graminoid -- trait_name: plant_growth_form - find: Sedge - replace: graminoid -- trait_name: plant_growth_form - find: Rush - replace: graminoid -- trait_name: plant_growth_form - find: Cushion - replace: herb -- trait_name: plant_growth_form - find: Mat - replace: herb -- trait_name: leaf_area - find: '113106.9082' - replace: .na -- trait_name: leaf_area - find: '40614.861' - replace: .na -- trait_name: specific_leaf_area - find: '21381.26809' - replace: .na -- trait_name: specific_leaf_area - find: '1269.214394' - replace: .na -taxonomic_updates: -- find: Agrostis mulleriana dwarf form - replace: Agrostis muelleriana - reason: Change spelling to align with APC or ALA species lists (Sam Andrew, 2018-02-07) -- find: Brachyscome sp. (aff. tadgellii) - replace: Brachyscome tadgellii - reason: Change spelling to align with APC or ALA species lists (Sam Andrew, 2018-02-07) -- find: Brachyscome sp. (aff. tenuiscapa) - replace: Brachyscome tenuiscapa - reason: Change spelling to align with APC or ALA species lists (Sam Andrew, 2018-02-07) -- find: Stylidium sp. (aff. graminifolium) - replace: Stylidium graminifolium - reason: Change spelling to align with APC or ALA species lists (Sam Andrew, 2018-02-07) -- find: Isolepsis aucklandica - replace: Isolepis aucklandica - reason: Change spelling to align with APC or ALA species lists (Sam Andrew, 2018-02-07) -- find: Isolepsis crassiuscula - replace: Isolepis crassiuscula - reason: Change spelling to align with APC or ALA species lists (Sam Andrew, 2018-02-07) -- find: Isolepsis montivaga - replace: Isolepis montivaga - reason: Change spelling to align with APC or ALA species lists (Sam Andrew, 2018-02-07) -- find: Ozothamnus sp. (aff. hookeri) - replace: Ozothamnus hookeri - reason: Change spelling to align with APC or ALA species lists (Sam Andrew, 2018-02-07) -- find: Oreomyrrhis eriopoda (pinnae) - replace: Chaerophyllum eriopodum - reason: Synonym reported by TaxonStand (2018-02-07) -- find: Oreomyrrhis pulvinifica (pinnae) - replace: Chaerophyllum pulvinificum - reason: Synonym reported by TaxonStand (2018-02-07) -- find: Derwentia derwentiana subsp. maideniana - replace: Veronica derwentiana subsp. maideniana - reason: Synonym reported by TaxonStand (2018-02-15) -- find: Acetosella vulgaris - replace: Rumex acetosella - reason: Synonym reported by TaxonStand (2018-02-08) -- find: Euchiton argentifolius - replace: Argyrotegium mackayi - reason: Synonym reported by TaxonStand (2018-02-08) -- find: Euchiton fordianus - replace: Argyrotegium fordianum - reason: Synonym reported by TaxonStand (2018-02-08) -- find: Trisetum spicatum subsp australiense - replace: Trisetum antarcticum - reason: Synonym reported by TaxonStand (2018-02-08) -- find: Australopyrum velutinum - replace: Agropyron velutinum - reason: Synonym reported by TaxonStand (2018-02-08) -- find: Austrodanthonia alpicola - replace: Rytidosperma alpicola - reason: Synonym reported by TaxonStand (2018-02-08) -- find: Brachyscome nivalis - replace: Brachyscome radicans - reason: Synonym reported by TaxonStand (2018-02-08) -- find: Caltha introloba - replace: Psychrophila introloba - reason: Synonym reported by TaxonStand (2018-02-08) -- find: Chionogentias muelleriana subsp. alpestris - replace: Gentianella muelleriana subsp. alpestris - reason: Synonym reported by TaxonStand (2018-02-15) -- find: Chionohebe densifolia - replace: Veronica densifolia - reason: Synonym reported by TaxonStand (2018-02-08) -- find: Derwentia derwentiana - replace: Veronica derwentiana - reason: Synonym reported by TaxonStand (2018-02-08) -- find: Deyeuxia carinata - replace: Calamagrostis carinata - reason: Synonym reported by TaxonStand (2018-02-08) -- find: Deyeuxia crassiuscula - replace: Calamagrostis crassiuscula - reason: Synonym reported by TaxonStand (2018-02-08) -- find: Euchiton nitidulus - replace: Argyrotegium nitidulum - reason: Synonym reported by TaxonStand (2018-02-08) -- find: Euphrasia alsa - replace: Euphrasia scabra - reason: Synonym reported by TaxonStand (2018-02-08) -- find: Oreobolus pumilio subsp. pumilio - replace: Oreobolus pumilio - reason: Synonym reported by TaxonStand (2018-02-08) -- find: Oreomyrrhis ciliata - replace: Chaerophyllum australianum - reason: Synonym reported by TaxonStand (2018-02-08) -- find: Oreomyrrhis eriopoda - replace: Chaerophyllum eriopodum - reason: Synonym reported by TaxonStand (2018-02-08) -- find: Oreomyrrhis pulvinifica - replace: Chaerophyllum pulvinificum - reason: Synonym reported by TaxonStand (2018-02-08) -- find: Phebalium ovatifolium - replace: Nematolepis ovatifolia - reason: Synonym reported by TaxonStand (2018-02-08) -- find: Prasophyllum tadgellianum - replace: Prasophyllum alpinum - reason: Synonym reported by TaxonStand (2018-02-08) -- find: Pratia surrepens s.l. - replace: Lobelia surrepens - reason: Synonym reported by TaxonStand (2018-02-08) -- find: Scleranthus biflorus - replace: Mniarum biflorum - reason: Synonym reported by TaxonStand (2018-02-08) -- find: Senecio pinnatifolius var. pleiocephalus - replace: Senecio pinnatifolius var. alpinus - reason: Synonym reported by TaxonStand (2018-02-15) -- find: Trisetum spicatum subsp. australiense - replace: Trisetum antarcticum - reason: Synonym reported by TaxonStand (2018-02-08) -- find: Erigeron bellidiodes - replace: Erigeron bellidioides - reason: Spelling mistake identified by TaxonStand (2018-02-08) -- find: Orites lancifolia - replace: Orites lancifolius - reason: Spelling mistake identified by TaxonStand (2018-02-08) -- find: Stackhousia pulvinarus - replace: Stackhousia pulvinaris - reason: Spelling mistake identified by TaxonStand (2018-02-08) -- find: Leptorynchus squamatus - replace: Leptorhynchos squamatus - reason: Typo, align to known species (D Falster) -- find: Erigeron bellidoides - replace: Erigeron bellidioides - reason: typo, align to known species (S Andrew) -questions: - contributors: The referenced manuscript does not specify methods of SLA - and LDMC? Some of the SLA values are very high, the opposite of what is commonly observed in alpine species. Are these values correct? A number of leaf dry matter content values suggest the leaves lost 98% of their weight - is this correct? And a few leaves weigh more dry than wet - is this correct? - diff --git a/data/Venn_2011/raw_data/Venn snowpatch KNP trait data.xlsx b/data/Venn_2011/raw_data/Venn snowpatch KNP trait data.xlsx deleted file mode 100644 index 49876914c..000000000 Binary files a/data/Venn_2011/raw_data/Venn snowpatch KNP trait data.xlsx and /dev/null differ diff --git a/data/Venn_2011/raw_data/data.csv b/data/Venn_2011/raw_data/data.csv deleted file mode 100644 index f347c7433..000000000 --- a/data/Venn_2011/raw_data/data.csv +++ /dev/null @@ -1,217 +0,0 @@ -Species,region,seed mass (mg),GF,site,leaf area (mm2),SLA mm2/mg-1,LDMC (mg/g-1),height (cm),notes -Acaena ovina,Subalpine,,Herb,Rennix Walk Car Park,536.4666,9.408393546,386.0528097,, -Acaena sp.,Alpine,,Herb,Tall alpine herbfield next to Snowy River1,46.1727,19.98818182,385,, -Acetosella vulgaris,Alpine,0.4732,,,799.18965,,,20, -Aciphylla glacialis,Alpine,,Herb,Snowbank below Stillwell,4176.289,7.030789899,255.2642888,, -Aciphylla simplicifolia,Alpine,,Herb,Tall alpine herbfield raised bog,604.7821,264.0969869,5.571776156,, -Agrostis meionectes,Alpine,,graminoid,Tall alpine herbfield4,22.844,2.928717949,975,, -Agrostis muelleriana,Alpine,0.100694444,,,99,,,20, -Agrostis muelleriana,Alpine,,graminoid,Start of Club Lake Creek,31.9484,6.725978947,395.8333333,, -Agrostis mulleriana dwarf form,Alpine,,graminoid,FMUB2,6.0565,10.26525424,49.16666667,, -Arthropodium milleflorum,Subalpine,,Herb,Dainers Gap SAG3 Site,1152.9,21.04600219,180.0788955,, -Asperula gunnii,Alpine,,Herb,Tall alpine herbfield1,4.141,21.79684211,593.75,, -Asperula scoparia,Subalpine,,Herb,Dainers Gap SAG3 Site,2.253,22.53,100,, -Astelia alpina var. novae-hollandiae,Alpine,,Herb,Tall alpine herbfield next to Snowy River1,1516.4802,9.190789091,226.6483516,, -Australopyrum velutinum,Alpine,,graminoid,Tall alpine herbfield next to Snowy River1,303.097,101.0324667,53.57142857,, -Austrodanthonia alpicola,Alpine,,graminoid,Charlotte Pass Phenology Site,81.899,8.53109375,484.8484848,, -Baeckea gunniana,Alpine,,Shrub,Spencers Creek,2.8925,20.66071429,175,, -Baeckea utilis var. utilis,Alpine,,Shrub,Snowy River Phebalium heath,7.4,7.872340426,408.6956522,, -Brachyscome nivalis,Alpine,,Herb,Charlotte Pass Carpark,133.007,12.37911065,193.7875752,, -Brachyscome obovata,Alpine,,Herb,Charlotte Pass Lodge,164.887,9.885305755,22.51012146,, -Brachyscome scapigera,Alpine,,Herb,Snow bank1,442.9147,23.3113,124.1830065,, -Brachyscome sp. (aff. tadgellii),Alpine,,Herb,,125.795,7.642454435,227.6625173,, -Brachyscome sp. (aff. tenuiscapa),Alpine,,Herb,Club Lake Creek Pool,217.2,13.78170685,17.45293466,, -Brachyscome spathulata,Alpine,0.239,,,195.3333333,,,30, -Brachysome spatulatha subsp. spathulata,Alpine,,Herb,,160.3296,22.90422857,71.42857143,, -Brachysome stolonifera,Alpine,,Herb,Tall alpine herbfield5,46.3554,7.951183533,364.375,, -Caltha introloba,Alpine,,Herb,Snow bank1,188.186,376.372,5.102040816,, -Cardamine lilacina s.l.,Alpine,,Herb,Charlotte Pass Phenology Site_73,101.652,19.39923664,188.4892086,, -Cardamine robusta,Alpine,,Herb,Start of Club Lake Creek,521.978,43.49816667,68.96551724,, -Cardamine robusta,Alpine,0.537777778,,,227.0748299,,,25, -Carex appressa,Subalpine,,graminoid,Dainers Gap SAG3 Site,1572.1,17.64026032,390.1926445,, -Carex breviculmis,Alpine,,graminoid,Tall alpine herbfield1,137.2486,16.81968137,354.7826087,, -Carex breviculmis,Alpine,1.035185185,,,186.6882667,,,15, -Carex canescens,Alpine,,graminoid,Club Lake FF,498.748,19.26412901,30.45882353,, -Carex cephalotes,Alpine,0.8344,,,104.2857143,,,20, -Carex echinata,Alpine,,graminoid,Charlotte Pass Lodge,158.137,17.74828283,29.89932886,, -Carex gaudichaudiana,Alpine,,graminoid,Tall alpine herbfield next to snowbank,314.1021,78.525525,66.66666667,, -Carex gaudichaudiana,Alpine,0.4672,,,372.7272727,,,40, -Carex hebes,Alpine,,graminoid,Between Clarke 3 and 2,168.81,19.09615385,394.6428571,, -Carpha nivicola,Alpine,,graminoid,On way to Club Lake,142.0231,8.364140165,361.2765957,, -Celmisia costiniana,Alpine,,Herb,Snowbank below Stillwell,289.666,9.655536667,205.4794521,, -Celmisia costiniana,Alpine,2.641875,,,428.88,,,15, -Celmisia pugioniformis,Alpine,,Herb,,303.9083,17.87695882,118.8811189,, -Chionochloa frigida,Alpine,,graminoid,On way to Club Lake,2562.100778,6.981201029,474.7736093,, -Chionogentias muelleriana subsp. alpestris,Alpine,,Herb,Tall alpine herbfield11,28.244,15.26686486,616.6666667,, -Chionohebe densifolia,Alpine,,Shrub,FMUB2,6.893,10.94095238,42,, -Colobanthus nivicola,Alpine,,,Tall alpine herbfield next to Snowy River1,18.8024,12.05282051,222.8571429,, -Colobanthus nivicola,Alpine,0.049130435,,,5.06,,,2, -Colobanthus pulvinatus,Alpine,,Herb,,1.66,0.458563536,603.3333333,, -Coprosma niphophila,Alpine,,Shrub,East of main range 500m from junction,9.425,9.921052632,263.8888889,, -Cotula alpina,Alpine,,Herb,Tall alpine herbfield next to Snowy River1,39.6281,11.8647006,256.9230769,, -Cotula alpina,Alpine,0.2268,,,54.174,,,5, -Craspedia alba,Alpine,,Herb,Tall alpine herbfield next to Snowy River1,86.855,18.67849462,258.3333333,, -Craspedia aurantia,Alpine,,Herb,Charlotte Pass Lodge,837.246,23.73146259,19.93220339,, -Craspedia costiniana,Alpine,,Herb,Tall alpine herbfield5,1763.408,22.9013987,103.4328358,, -Craspedia lamicola,Alpine,,Herb,Snowbank below Stillwell,1003.4104,20.90438333,112.412178,, -Craspedia lamicola,Alpine,1.1308,,,1841.565217,,,50, -Craspedia maxgrayi,Alpine,,Herb,Snowbank below Stillwell,1041.0999,28.13783514,86.24708625,, -Craspedia sp. B,Alpine,,Herb,Start of Club Lake Creek,909.721,15.96001228,199.3006993,, -Derwentia derwentiana,Subalpine,,Herb,Snowy River Phebalium heath,1565.2,8.919026725,297.0379147,, -Derwentia derwentiana subsp. maideniana,Subalpine,,Herb,Dainers Gap SAG3 Site,2005.1898,10.33123705,258.8556949,, -Deyeuxia carinata,Alpine,,graminoid,Charlotte Pass Lodge,352.965,12.69200647,32.75618375,, -Deyeuxia crassiuscula,Alpine,,graminoid,Tall alpine herbfield2,272.449,27.2449,112.5,, -Dianella tasmanica,Alpine,,Herb,Up Lodge,14362.808,5.548399044,326.675248,, -Dichosciadium ranunculaceum var. ranunculaceum,Alpine,,Herb,On way to Club Lake,411.387,13.71288667,180,, -Diplaspis nivis,Alpine,,Herb,On way to Club Lake,113106.9082,21381.26809,165.3125,, -Drosera arcturi,Alpine,,Herb,Tall alpine herbfield next to snowbank,64.073,16.55633075,351.8181818,, -Empodisma minus,Alpine,,graminoid,On way to Club Lake,8.782,3.70535865,169.2857143,, -Epacris glacialis,Alpine,,Shrub,Spencers Creek,5.05,8.859649123,518.1818182,, -Epacris microphylla s.l.,Alpine,,Shrub,Edge of track Mt Kosciuszko,4.1,6.721311475,554.5454545,, -Epacris paludosa,Alpine,,Shrub,Snowy River Phebalium heath,11.5,9.829059829,433.3333333,, -Epacris petrophila,Alpine,,Shrub,Spencers Creek,8.502,18.89333333,642.8571429,, -Epilobium gunnianum,Alpine,,Herb,Tall alpine herbfield next to snowbank,214.9444,53.7361,81.63265306,, -Epilobium sarmentaceum,Alpine,,Herb,Dainers Gap SAG3 Site,114.3,18.17170111,253.6290323,, -Epilobium tasmanicum,Alpine,,Herb,Club Lake FF,12.348,16.24789474,23.03030303,, -Epilobium tasmanicum,Alpine,0.044705882,,,10.625,,,5, -Erigeron bellidiodes,Alpine,,Herb,Snowbank below Stillwell,168.8788,84.4394,30.76923077,, -Erigeron bellidoides,Alpine,0.248,,,177.65,,,16, -Erigeron nitidus,Alpine,,Herb,Tall alpine herbfield10,166.4504,10.00302885,291.9298246,, -Erigeron nitidus,Alpine,0.764210526,,,160.0484,,,16, -Erigeron paludicola,Alpine,,Herb,Dainers Gap SAG3 Site,564,20.23681378,102.0131772,, -Erigeron setosus,Alpine,,Herb,Snowbank below Stillwell,19.8564,7.69627907,286.6666667,, -Erigeron setosus,Alpine,0.2004,,,27.77777778,,,2, -Euchiton argentifolius,Alpine,,Herb,Tall alpine herbfield11,20.346,25.11790123,405,, -Euchiton argentifolius,Alpine,0.026052632,,,42.30769231,,,8, -Euchiton fordianus,Alpine,,Herb,Tall alpine herbfield1,100.964,17.90143617,352.5,, -Euchiton fordianus,Alpine,0.087131904,,,40.113,,,3, -Euchiton nitidulus,Alpine,,Herb,Club Lake FF,22.8084,30.01105263,20,, -Euphrasia alsa,Alpine,,Herb,,16.3301,7.038836207,773.3333333,, -Euphrasia collina sub sp diversitcolour,Alpine,0.275,,,62.625,,,30, -Euphrasia collina subs.glacialis,Alpine,,Herb,Start of Club Lake Creek,46.9278,29.89031847,65.41666667,, -Euphrasia collina var. diversicolor,Alpine,,Herb,Snowbank below Stillwell,47.746,9.362039216,283.3333333,, -Euphrasia collina var. lapidosa,Alpine,,Herb,FMUB1,52.517,17.27529605,26.43478261,, -Ewartia nubigena,Alpine,,Shrub,Edge of track Mt Kosciuszko,14.7,19.86486486,411.1111111,, -Ewartia nubigena,Alpine,45.89333333,,,10.804,,,2, -Geranium antrorsum,Alpine,,Herb,Charlotte Pass Lodge,458.088,14.3556346,25.73387097,, -Geranium potentilloides var.,Alpine,,Herb,Dainers Gap,629.979,12.89091876,261.0576923,, -Gonocarpus micranthus subsp. micranthus,Alpine,,Herb,Tall alpine herbfield next to Snowy River1,6.581,24.37444444,613.6363636,, -Gonocarpus montanus,Alpine,,Herb,Snowy River Phebalium heath,11.1,18.81355932,256.5217391,, -Gonocarpus montanus,Alpine,,Herb,Charlotte Pass Chairlift,28,11.40271493,303.1550069,, -Gonocarpus montanus,Alpine,0.703015873,,,27.77777778,,,15, -Grevillea australis,Alpine,,Shrub,Stillwell Path between chairlift and Charlotte Pass1,24.6,5.454545455,406.3063063,, -Helichrysum scorpioides,Alpine,,Herb,Tall alpine herbfield3,110.7231,14.62656539,445.2941176,, -Helichrysum scorpioides,Alpine,0.2525,,,162.12045,,,10, -Herpolirion novae-zelandiae,Alpine,,Herb,Charlotte Pass Lodge,57.6173,14.66089059,30.46511628,, -Hovea montana,Alpine,,Shrub,Stillwell Path between chairlift and Charlotte Pass2,52.028,5.314402451,540.8839779,, -Isolepsis aucklandica,Alpine,,graminoid,Betts Creek,16.97666667,14.41415094,336.5079365,, -Isolepsis crassiuscula,Alpine,,graminoid,Betts Creek,46.6798,18.59752988,295.2941176,, -Isolepsis montivaga,Alpine,,graminoid,Charlotte Pass below Mt Stilwell,25.115,11.62731481,284.2105263,, -Juncus antarcticus,Alpine,,graminoid,Charlotte Pass below Mt Stilwell,15.74744444,13.12287037,444.4444444,, -Juncus falcatus,Alpine,,graminoid,Charlotte Pass Cafe,119.8731,14.06961268,314.3911439,, -Kunzea muelleri,Alpine,,Shrub,Spencers Creek,4.487,8.0125,622.2222222,, -Leptorhynchos squamatus s.l.,Alpine,,Herb,Tall alpine herbfield10,80.445,10.76911647,373.5,, -Leptorynchus squamatus,Alpine,0.114285714,,,45.2984,,,25, -Leucochrysum albicans subsp. alpinum,Alpine,,Herb,Feldmark,194.1206,21.56895556,132.3529412,, -Leucopogon montanus,Alpine,,Shrub,Up Heartbreak Hill,11.82,8.040816327,525,, -Linum marginale,Subalpine,,Herb,Dainers Gap,25.9055,18.90912409,240.3508772,, -Luzula acutifolia subsp. nana,Alpine,,graminoid,Club Lake FF,31.6989,15.53867647,27.94520548,, -Luzula acutifolia subsp. nana,Alpine,,graminoid,Stillwell Basin,33.8254,10.00751479,422.5,, -Luzula acutifolia subsp. nana,Alpine,0.3304,,,39.95261905,,,10,I took this out of the analyses -Luzula alpestris,Alpine,,graminoid,Tall alpine herbfield9,480.911,21.8596,244.4444444,, -Luzula australasica,Alpine,,graminoid,Start of Club Lake Creek,47.365,7.354813665,429.3333333,, -Luzula australasica subsp dura,Alpine,0.2572,,,192.1875,,,20, -Luzula modesta,Alpine,,graminoid,Charlotte Pass Lodge,355.7511111,19.58262997,25.37243948,, -Luzula modesta,Alpine,0.427083333,,,465.6153846,,,30, -Luzula novae-cambriae,Alpine,,graminoid,Stillwell Path chairlift,470.0769,14.46835642,326.2048193,, -Melicytus sp. (Hymenanthera auct.),Alpine,,Shrub,Between Clarke 3 and 2,27.7,12.14912281,296.1038961,, -Microseris lanceolata,Alpine,,Herb,Tall alpine herbfield5,930.388,19.79548936,137.7850163,, -Myosotis australis,Subalpine,,Herb,Dainers Gap SAG3 Site,129.2,21.53333333,215.8273381,, -Myriophyllum pedunculatum subsp. pedunculatum,Alpine,,Herb,Betts Creek,6.398,22.85,147.3684211,, -Neopaxia australasica,Alpine,,Herb,Club Lake FF,47.9489,21.12286344,10.46082949,, -Neopaxia australasica,Alpine,,Herb,Tall alpine herbfield8,46.568,14.5070405,160.5,, -Neopaxia australasica,Alpine,0.7522,,,41.36,,,3, -Olearia algida,Alpine,,Shrub,Spencers Creek,2.075,9.880952381,350,, -Olearia phlogopappa var. subrepanda,Alpine,,Shrub,Stillwell Path between chairlift and Charlotte Pass2,15.9,12.04545455,425.8064516,, -Olearia phlogopappa var. flavescens,Alpine,,Shrub,Snowy River Phebalium heath,85.4,9.046610169,412.2270742,, -Oreobolus distichus,Alpine,,graminoid,Charlotte Pass Lodge,26.1134,7.635497076,34.2,, -Oreobolus pumilio subsp. pumilio,Alpine,,graminoid,Club Lake FF,33.6433,9.293729282,37.31958763,, -Oreomyrrhis ciliata,Alpine,,Herb,Tall alpine herbfield next to Snowy River1,210.061,10.76132172,320,, -Oreomyrrhis eriopoda,Alpine,,Herb,Tall alpine herbfield11,834.2065,9.58858046,240.9972299,, -Oreomyrrhis eriopoda (pinnae),Alpine,4.5388,,,81,,,30, -Oreomyrrhis pulvinifica,Alpine,,Herb,Snowbank below Stillwell,39.6715,14.8582397,205.3846154,, -Oreomyrrhis pulvinifica (pinnae),Alpine,1.0404,,,42.08333333,,,10, -Orites lancifolia,Alpine,,Shrub,Stillwell Path between chairlift and Charlotte Pass1,189.7346,4.179176211,485.042735,, -Oschatzia cuneifolia,Alpine,,Herb,Spencers Creek,175.6,,0,, -Oxylobium ellipticum,Alpine,,Shrub,Stillwell Path between chairlift and Charlotte Pass1,44.9,12.93948127,394.3181818,, -Ozothamnus alpinus,Alpine,,Shrub,Up Heartbreak Hill,11.65,6.695402299,470.2702703,, -Ozothamnus rosmarinifolius,Subalpine,,Shrub,Snowy River Phebalium heath,29.8,8.739002933,383.1460674,, -Ozothamnus secundiflorus,Alpine,,Shrub,Charlotte Pass Lodge,88.745,13.59035222,32.00980392,, -Ozothamnus sp. (aff. hookeri),Alpine,,Shrub,Dainers Gap,3.4392,5.732,240,, -Parantennaria uniceps,Alpine,,Herb,Tall alpine herbfield next to Snowy River1,5.245,74.92428571,152.173913,, -Pentachondra pumila,Alpine,,Shrub,Spencers Creek,7.535,8.970238095,646.1538462,, -Phebalium ovatifolium,Alpine,,Shrub,Stillwell Path chairlift,44.0702,3.585858421,456.8773234,, -Pimelea alpina,Alpine,,Shrub,Spencers Creek,15.388,11.0705036,365.7894737,, -Pimelea axiflora subsp. alpina,Alpine,,Shrub,Dainers Gap SAG3 Site,68.5,19.24157303,289.4308943,, -Pimelea ligustrina subsp. ciliata,Alpine,,Shrub,Snowy River Phebalium heath,231.2,13.31797235,281.8181818,, -Plantago alpestris,Alpine,,Herb,Spencers Creek,127.8,,0,, -Plantago euryphylla,Alpine,,Herb,Start of Club Lake Creek,40614.861,1269.214394,196.3190184,, -Plantago glacialis,Alpine,,Herb,On way to Club Lake,23.109,8.28265233,398.5714286,, -Plantago glacialis,Alpine,0.24,,,37.36,,,3, -Plantago muelleri,Alpine,,Herb,,487.3337,8.347613909,180.1851852,, -Poa costiniana,Alpine,,graminoid,Tall alpine herbfield8,131.9108,5.803378795,366.6129032,, -Poa costiniana,Alpine,0.1975,,,386.2992,,,40, -Poa fawcettiae,Alpine,,graminoid,Start of Club Lake Creek,366.146,61.0243,115.3846154,, -Poa fawcettiae,Alpine,0.359090909,,,137.7307,,,60, -Poa hiemata,Alpine,,graminoid,Stillwell Basin,30.282,,0,, -Poa hiemata,Alpine,0.35,,,57.31733333,,,60, -Poa saxicola,Alpine,,graminoid,Tall alpine herbfield next to Snowy River2,347.5628,115.8542667,60,, -Podocarpus lawrencei,Alpine,,Shrub,Snowy River Phebalium heath,10.1,4.570135747,442,, -Podocarpus lawrencei,Alpine,,Shrub,Charlotte Pass Lodge,20.7753,6.995050505,39.6,, -Podolepis robusta,Alpine,,Herb,Near Snowy river,3073.8,13.07721761,163.1045729,, -Prasophyllum alpestre,Alpine,,Herb,Tall alpine herbfield next to snowbank,1181.183,18.74893968,137.5545852,, -Prasophyllum tadgellianum,Alpine,,Herb,Tall alpine herbfield11,984.32,22.89117209,133.126935,, -Pratia surrepens s.l.,Alpine,,Herb,Tall alpine herbfield next to Snowy River1,20.8636,10.5906599,860.2620087,, -Pratia surrepens s.l.,Alpine,,Herb,Club Lake Creek,43.45244444,14.75743396,31.32387707,, -Prostanthera cuneata,Alpine,,Shrub,Stillwell Path chairlift,16.3,6.70781893,391.9354839,, -Ranunculus acrophilus,Alpine,,Herb,Feldmark,153.8615,51.28716667,35.29411765,, -Ranunculus acrophilus,Alpine,1.076,,,61.66666667,,,16, -Ranunculus anemoneus,Alpine,2.5468,,,5378.397213,,,35, -Ranunculus anenonemous,Alpine,,Herb,Tall alpine herbfield7,8070.346,5.882176531,225.4354256,, -Ranunculus dissectifolius,Alpine,,Herb,Charlotte Pass Lodge,845.9502,8.709463605,22.61993479,, -Ranunculus dissectifolius,Alpine,1.7484,,,312,,,15, -Ranunculus graniticola,Alpine,,Herb,Tall alpine herbfield next to Snowy River2,394.992,23.23481765,111.8421053,, -Ranunculus gunnianus,Alpine,,Herb,On way to Club Lake,811.4869,9.327435632,177.5510204,, -Ranunculus millanii,Alpine,,Herb,Tall alpine herbfield next to Snowy River1,31.4456,12.52812749,278.8888889,, -Ranunculus muelleri,Alpine,,Herb,Tall alpine herbfield6,316.055,9.295741176,203.5928144,, -Ranunculus niphophilus,Alpine,,Herb,Start of Club Lake Creek,147.5606,10.47271824,230.9836066,, -Ranunculus niphophilus,Alpine,1.6444,,,145,,,15, -Rhodanthe anthemoides,Alpine,,Herb,Charlotte Pass Chairlift,27.125,13.49502488,261.038961,, -Richea continentis,Alpine,,Shrub,Spencers Creek,97.8,,0,, -Rytidosperma nivicola,Alpine,,graminoid,Club Lake FF,43.9868,10.75471883,32.98387097,, -Rytidosperma nudiflorum,Alpine,,graminoid,Start of Club Lake Creek,136.254,45.41806667,63.82978723,, -Rytidosperma nudiflorum,Alpine,1.275,,,46.85714286,,,40, -Rytidosperma pumilum,Alpine,,graminoid,Charlotte Pass below Mt Stilwell,35.6148,11.27050633,478.7878788,, -Scaevola hookeri,Subalpine,,Herb,Dainers Gap carpark,62.3,15.15815085,202.4630542,, -Schizeilema fragoseum,Alpine,,Herb,Between Clarke 3 and 2,234.781,12.52833511,183.5455436,, -Schoenus calyptratus,Alpine,,graminoid,Charlotte Pass below Mt Stilwell,13.0548,15.7286747,296.4285714,, -Scleranthus biflorus,Alpine,,Herb,Tall alpine herbfield near Club Lake,6.1402,12.2804,125,, -Senecio gunnii,Alpine,,Herb,Tall alpine herbfield3,563.237,25.60168182,111.6751269,, -Senecio pectinatus var. major,Alpine,,Herb,Tall alpine herbfield next to Snowy River1,172.9245,8.68530889,223.7078652,, -Senecio pinnatifolius var. pleicephalus,Alpine,0.2884,,,97.2,,,45, -Senecio pinnatifolius var. pleiocephalus,Alpine,,Herb,Tall alpine herbfield next to snowbank,194.4204,194.4204,12.34567901,, -Stackhousia pulvinaris,Alpine,2.6352,,,6.06,,,5, -Stackhousia pulvinarus,Alpine,,graminoid,Start of Club Lake Creek,12.224,5.963073171,512.5,, -Stellaria pungens,Subalpine,,Herb,Dainers Gap SAG3 Site,10.5,16.40625,220.6896552,, -Stylidium graminifolium,Subalpine,,Herb,Dainers Gap SAG3 Site,274.125,10.36389414,207.7225131,, -Stylidium sp. (aff. graminifolium),Alpine,,Herb,Below Clarke 4,110.075,10.1827012,1403.896104,, -Tasmannia xerophila subsp. xerophila,Alpine,,Shrub,Charlotte Pass Lodge,503.1498,7.99157878,31.41716567,, -Trisetum spicatum subsp australiense,Alpine,0.3772,,,463.0588235,,,40, -Trisetum spicatum subsp. australiense,Alpine,,graminoid,Tall alpine herbfield5,537.7843,18.54428621,119.3415638,, -Uncinia sulcata,Alpine,,graminoid,On way to Club Lake,237.72,19.81001667,200,, -Viola betonicifolia subsp. betonicifolia,Alpine,,Herb,On way to Club Lake,177.114,17.17883608,234.3181818,, -Viola fuscoviolacea,Subalpine,,Herb,Charlotte Pass Lodge,48.753,26.07112299,18.51485149,, -Viola hederacea,Subalpine,,Herb,Dainers Gap SAG3 Site,214.4,19.05777778,284.0909091,, -Wahlenbergia ceracea,Alpine,,Herb,Tall alpine herbfield9,112.356,19.60837696,301.5789474,, -Wahlenbergia gloriosa,Alpine,,Herb,Saw Pitt Creek Waterfall Walk,73.5655,15.39027197,247.6683938,, -Xerochrysum bracteatum,Subalpine,,Herb,Dainers Gap SAG3 Site,564.1111111,10.31281739,239.6786758,, diff --git a/remake.yml b/remake.yml index f6680480a..041b45c3d 100644 --- a/remake.yml +++ b/remake.yml @@ -1094,14 +1094,6 @@ targets: unit_conversions, species_list ) - Richards_2008: - command: > - load_study("data/Richards_2008/data.csv", - "data/Richards_2008/metadata.yml", - definitions, - unit_conversions, - species_list - ) Roberts_2006: command: > load_study("data/Roberts_2006/data.csv", @@ -1222,14 +1214,6 @@ targets: unit_conversions, species_list ) - Specht_1958: - command: > - load_study("data/Specht_1958/data.csv", - "data/Specht_1958/metadata.yml", - definitions, - unit_conversions, - species_list - ) Standish_2019: command: > load_study("data/Standish_2019/data.csv", @@ -1294,14 +1278,6 @@ targets: unit_conversions, species_list ) - Venn_2011: - command: > - load_study("data/Venn_2011/data.csv", - "data/Venn_2011/metadata.yml", - definitions, - unit_conversions, - species_list - ) Vesk_2004: command: > load_study("data/Vesk_2004/data.csv", @@ -1591,7 +1567,6 @@ targets: RBGSYD_2014, Rice_1991, Richards_2003, - Richards_2008, Roberts_2006, Rye_2002, Rye_2006, @@ -1607,7 +1582,6 @@ targets: Sendall_2016, Seng_1951, Soliveres_2012, - Specht_1958, Standish_2019, Thompson_2001, TMAG_2009, @@ -1616,7 +1590,6 @@ targets: Tomlinson_2013, Trudgen_2005, Trudgen_2014, - Venn_2011, Vesk_2004, Vesk_2007, WAH_1998,