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DESCRIPTION
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Package: hmde
Title: Hierarchical Methods for Differential Equations
Version: 0.1.0
Authors@R:
c(
person(given = "Daniel", family = "Falster", role = c("aut", "ctb"), email = "[email protected]", comment = c(ORCID = "0000-0002-9814-092X")),
person(given = "Tess", family = "O'Brien", role = c("aut", "cre", "cph"), email = "[email protected]", comment = c(ORCID = "XXXX-XXXX-XXXX-XXXX")),
person(given = "Fonti", family = "Kar", role = c("ctb"), email = "[email protected]", comment = c(ORCID = "0000-0002-2760-3974")),
person(given = "David", family= "Warton", role = c("aut", "ctb"), email = "[email protected]", comment = c(ORCID = "0000-0002-1642-628X"))
)
Description: Wrapper for Stan that offers a number of in-built models to implement a hierarchical Bayesian longitudinal model for repeat observation data. Model choice selects the differential equation that is fit to the observations. Single and multi-individual models are available.
License: MIT + file LICENSE
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2
Biarch: true
Depends:
R (>= 3.5.0)
Imports:
methods,
dplyr,
ggplot2,
purrr,
Rcpp (>= 0.12.0),
RcppParallel (>= 5.0.1),
rlang,
rstan (>= 2.18.1),
rstantools (>= 2.3.1.1)
LinkingTo:
BH (>= 1.66.0),
Rcpp (>= 0.12.0),
RcppEigen (>= 0.3.3.3.0),
RcppParallel (>= 5.0.1),
rstan (>= 2.18.1),
StanHeaders (>= 2.18.0)
SystemRequirements: GNU make
Suggests:
knitr,
rmarkdown,
testthat (>= 3.0.0),
withr,
mnormt,
here,
patchwork,
deSolve,
cowplot,
mixtools,
MASS
VignetteBuilder: knitr
Config/testthat/edition: 3
LazyData: true