From ed436a4c7b2057685f79ab65234e707233c20e1d Mon Sep 17 00:00:00 2001
From: Fonti Kar <f.kar@unsw.edu.au>
Date: Tue, 22 Oct 2024 10:26:09 +1100
Subject: [PATCH] Added gbif parquet maintainece code

---
 R/maintenance.R                               | 41 ++++++++++++-------
 .../shinyapps.io/fontikar/infinitylists.dcf   |  2 +-
 2 files changed, 28 insertions(+), 15 deletions(-)

diff --git a/R/maintenance.R b/R/maintenance.R
index d96e365..b1705be 100644
--- a/R/maintenance.R
+++ b/R/maintenance.R
@@ -1,14 +1,27 @@
- # galah::galah_config(email = "wcornwell@gmail.com")
- # 
- # requireNamespace("job", quietly = TRUE)
- # job::job(packages = c("purrr", "dplyr", "arrow", "janitor", "galah", "stringr", "lubridate", "infinitylists"), {
- #    download_ala_obs(taxon = "Papilionoidea")
- #    download_ala_obs(taxon = "Odonata")
- #    download_ala_obs(taxon = "Marsupialia")
- #    download_ala_obs(taxon = "Cicadoidea")
- #    download_ala_obs(taxon = "Plantae")
- #    download_gbif_obs(taxon = "Arachnida", country_code = "FR")
- #    download_gbif_obs(taxon = "Squamata", country_code = "ES")
- #  })
-
-
+# requireNamespace("job", quietly = TRUE)
+# job::job(packages = c("purrr", "dplyr", "arrow", "janitor", "galah", "stringr", "lubridate", "infinitylists"), {
+#   
+#   galah::galah_config(email = "wcornwell@gmail.com")
+#   
+#   download_ala_obs(taxon = "Papilionoidea")
+#   download_ala_obs(taxon = "Odonata")
+#   download_ala_obs(taxon = "Marsupialia")
+#   download_ala_obs(taxon = "Cicadoidea")
+#   download_ala_obs(taxon = "Plantae")
+# })
+# 
+# 
+# job::job(packages = c("purrr", "dplyr", "arrow", "janitor", "galah", "stringr", "lubridate", "infinitylists"), {
+#   
+#   galah::galah_config(atlas = "Global",
+#                         username = Sys.getenv("GBIF_USERNAME"),
+#                         password = Sys.getenv("GBIF_PWD"),
+#                         email = Sys.getenv("GBIF_EMAIL")
+#                       )
+#   
+#   download_gbif_obs(taxon = "Arachnida", country_code = "FR")
+#   download_gbif_obs(taxon = "Squamata", min_year = 2023)
+#   # download_gbif_obs(taxon = "Squamata", country_code = "ES")
+# })
+# 
+# 
diff --git a/rsconnect/shinyapps.io/fontikar/infinitylists.dcf b/rsconnect/shinyapps.io/fontikar/infinitylists.dcf
index 197b797..13262d2 100644
--- a/rsconnect/shinyapps.io/fontikar/infinitylists.dcf
+++ b/rsconnect/shinyapps.io/fontikar/infinitylists.dcf
@@ -5,6 +5,6 @@ account: fontikar
 server: shinyapps.io
 hostUrl: https://api.shinyapps.io/v1
 appId: 11400862
-bundleId: 9252048
+bundleId: 9252091
 url: https://unsw.shinyapps.io/infinitylists/
 version: 1