From 1aa247f1773ee026db5cf8ec2c3e5a7b1afa33ac Mon Sep 17 00:00:00 2001 From: Benjamin Altpeter Date: Tue, 22 Oct 2024 14:50:34 +0200 Subject: [PATCH] very unfinished: Use DuckDB instead of SQLite --- README.md | 4 + datasette/metadata.json | 5 + package.json | 1 + scripts/make-database.ts | 56 +-- yarn.lock | 730 ++++++++++++++++++++++++++++++++++++++- 5 files changed, 767 insertions(+), 29 deletions(-) diff --git a/README.md b/README.md index 7410ba3..25d225c 100644 --- a/README.md +++ b/README.md @@ -41,3 +41,7 @@ We are using the following Datasette plugins: * datasette-sqlite-url * datasette-sqlite-path * datasette-cors + +TODO: + +* Needs datasette-parquet, pytz diff --git a/datasette/metadata.json b/datasette/metadata.json index 7dd7e81..4af32e9 100644 --- a/datasette/metadata.json +++ b/datasette/metadata.json @@ -17,6 +17,11 @@ "plugins": { "datasette-cors": { "host_wildcards": ["https://*.tweasel.org", "http://localhost:*"] + }, + "datasette-parquet": { + "data": { + "file": "./datasette/data.duckdb" + } } } } diff --git a/package.json b/package.json index 9b8717a..2032960 100644 --- a/package.json +++ b/package.json @@ -7,6 +7,7 @@ "private": true, "dependencies": { "better-sqlite3": "^8.5.0", + "duckdb": "^1.1.1", "fs-extra": "^11.1.1", "sqlite-regex": "^0.2.3", "sqlite-url": "^0.1.0", diff --git a/scripts/make-database.ts b/scripts/make-database.ts index f93493e..6559061 100644 --- a/scripts/make-database.ts +++ b/scripts/make-database.ts @@ -1,26 +1,34 @@ -import Database from 'better-sqlite3'; import yesno from 'yesno'; -import * as sqliteRegex from 'sqlite-regex'; -import * as sqliteUrl from 'sqlite-url'; import fse from 'fs-extra'; import datasets from '../datasets.json'; +import duckdb from 'duckdb'; +import { promisify } from 'util'; (async () => { - if (await fse.pathExists('datasette/data.db')) { + if (await fse.pathExists('datasette/data.duckdb')) { const ok = await yesno({ - question: 'This will delete and recreate your existing `datasette/data.db`. Do you want to continue?', + question: 'This will delete and recreate your existing `datasette/data.duckdb`. Do you want to continue?', }); if (!ok) process.exit(1); - await fse.remove('datasette/data.db'); + await fse.remove('datasette/data.duckdb'); } - const db = new Database('datasette/data.db'); - db.loadExtension(sqliteRegex.getLoadablePath()); - db.loadExtension(sqliteUrl.getLoadablePath()); - db.pragma('journal_mode = WAL'); + const db = new duckdb.Database('datasette/data.duckdb'); + + db.register_udf('url_host', 'text', (url) => { + try { + const u = new URL(url); + return u.hostname; + } catch { + return null; + } + }); + + // Srsly, callbacks? + const db_exec = promisify(db.exec.bind(db)); // Create and fill `datasets` table. - db.exec(` + await db_exec(` create table "datasets" ( "slug" text, "title" text not null, @@ -28,7 +36,7 @@ create table "datasets" ( "url" text not null, "sourceCodeUrl" text, primary key("slug") -) without rowid; +); `); const insertDataset = db.prepare(` @@ -38,14 +46,14 @@ values (?, ?, ?, ?, ?); for (const d of datasets) insertDataset.run(d.slug, d.title, d.description, d.url, d.sourceCodeUrl); // Create and fill `requests` table. - db.exec(` + await db_exec(` create table "requests" ( "id" text, "dataset" text, "initiator" text, "platform" text not null, "runType" text, - "startTime" text not null, + "startTime" timestamptz not null, "method" text not null, "httpVersion" text, "endpointUrl" text not null, @@ -58,12 +66,12 @@ create table "requests" ( "cookies" text not null, foreign key("dataset") references "datasets"("slug"), primary key("dataset", "id") -) without rowid; +); `); - for (const d of datasets) db.exec(`attach './datasets/${d.slug}.db' as '${d.slug}';`); + for (const d of datasets) await db_exec(`attach './datasets/${d.slug}.db' as "${d.slug}" (type sqlite);`); - db.exec(` + await db_exec(` insert into requests select id, dataset, initiator, platform, runType, startTime, method, httpVersion, endpointUrl, scheme, host, port, path, content, headers, cookies from ( with vendors as materialized ( @@ -71,15 +79,17 @@ insert into requests case when initiator is null then null when instr(initiator,'.') = 0 then initiator + -- Regex taken from: https://regex101.com/r/jN6kU2/1 + -- when instr(initiator,'@') = 0 then regexp_extract(initiator, '^(?:https?:\\/\\/)?(?:[^@\\/\\n]+@)?(?:www\\.)?([^:\\/\\n]+)', 1) when instr(initiator,'@') = 0 then url_host(initiator) - else regex_replace('\\.[^.]+@.+?$', initiator, '') + else regexp_replace(initiator, '\\.[^.]+@.+?$', '') end as vendor, -- For the 'do-they-track' requests, we don't know the scheme, so we guess 'https'. That is reasonable considering that less than 0.5 % of requests in the rest of the dataset use 'http'. - coalesce(endpointUrl, regex_replace('\\?.+$', coalesce(scheme, 'https://') || host || path, '')) as endpointUrl, + coalesce(endpointUrl, regexp_replace(coalesce(scheme, 'https://') || host || path, '\\?.+$', '')) as endpointUrl, -- For counting the endpoints, it doesn't make sense to consider the scheme in either case. - regex_replace('\\?.+$', host || path, '') as _endpointForCounting + regexp_replace(host || path, '\\?.+$', '') as _endpointForCounting from ( - ${datasets.map((d) => `select * from '${d.slug}'.requests`).join('\nunion all\n')} + ${datasets.map((d) => `select * from "${d.slug}".requests`).join('\nunion all\n')} ) ) @@ -99,8 +109,4 @@ insert into requests and (not platform = 'ios' or initiator is not null) ); `); - - // Create indexes to speed up facets (https://docs.datasette.io/en/stable/facets.html#speeding-up-facets-with-indexes). - for (const facetColumn of ['method', 'dataset', 'runType', 'scheme', 'platform']) - db.exec(`create index "requests_${facetColumn}" on "requests"("${facetColumn}");`); })(); diff --git a/yarn.lock b/yarn.lock index 5894e23..8599d61 100644 --- a/yarn.lock +++ b/yarn.lock @@ -136,6 +136,47 @@ resolved "https://registry.yarnpkg.com/@esbuild/win32-x64/-/win32-x64-0.17.19.tgz#8cfaf2ff603e9aabb910e9c0558c26cf32744061" integrity sha512-lAhycmKnVOuRYNtRtatQR1LPQf2oYCkRGkSFnseDAKPl8lu5SOsK/e1sXe5a0Pc5kHIHe6P2I/ilntNv2xf3cA== +"@gar/promisify@^1.1.3": + version "1.1.3" + resolved "https://registry.yarnpkg.com/@gar/promisify/-/promisify-1.1.3.tgz#555193ab2e3bb3b6adc3d551c9c030d9e860daf6" + integrity sha512-k2Ty1JcVojjJFwrg/ThKi2ujJ7XNLYaFGNB/bWT9wGR+oSMJHMa5w+CUq6p/pVrKeNNgA7pCqEcjSnHVoqJQFw== + +"@mapbox/node-pre-gyp@^1.0.0": + version "1.0.11" + resolved "https://registry.yarnpkg.com/@mapbox/node-pre-gyp/-/node-pre-gyp-1.0.11.tgz#417db42b7f5323d79e93b34a6d7a2a12c0df43fa" + integrity 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concat-map "0.0.1" + +brace-expansion@^2.0.1: + version "2.0.1" + resolved "https://registry.yarnpkg.com/brace-expansion/-/brace-expansion-2.0.1.tgz#1edc459e0f0c548486ecf9fc99f2221364b9a0ae" + integrity sha512-XnAIvQ8eM+kC6aULx6wuQiwVsnzsi9d3WxzV3FpWTGA19F621kwdbsAcFKXgKUHZWsy+mY6iL1sHTxWEFCytDA== + dependencies: + balanced-match "^1.0.0" + buffer-from@^1.0.0: version "1.1.2" resolved "https://registry.yarnpkg.com/buffer-from/-/buffer-from-1.1.2.tgz#2b146a6fd72e80b4f55d255f35ed59a3a9a41bd5" @@ -205,11 +319,67 @@ buffer@^5.5.0: base64-js "^1.3.1" ieee754 "^1.1.13" +cacache@^16.1.0: + version "16.1.3" + resolved "https://registry.yarnpkg.com/cacache/-/cacache-16.1.3.tgz#a02b9f34ecfaf9a78c9f4bc16fceb94d5d67a38e" + integrity sha512-/+Emcj9DAXxX4cwlLmRI9c166RuL3w30zp4R7Joiv2cQTtTtA+jeuCAjH3ZlGnYS3tKENSrKhAzVVP9GVyzeYQ== + dependencies: + "@npmcli/fs" "^2.1.0" + "@npmcli/move-file" "^2.0.0" + chownr "^2.0.0" + fs-minipass "^2.1.0" + glob "^8.0.1" + infer-owner "^1.0.4" + lru-cache "^7.7.1" + 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resolved "https://registry.yarnpkg.com/set-blocking/-/set-blocking-2.0.0.tgz#045f9782d011ae9a6803ddd382b24392b3d890f7" + integrity sha512-KiKBS8AnWGEyLzofFfmvKwpdPzqiy16LvQfK3yv/fVH7Bj13/wl3JSR1J+rfgRE9q7xUJK4qvgS8raSOeLUehw== + +signal-exit@^3.0.0, signal-exit@^3.0.7: + version "3.0.7" + resolved "https://registry.yarnpkg.com/signal-exit/-/signal-exit-3.0.7.tgz#a9a1767f8af84155114eaabd73f99273c8f59ad9" + integrity sha512-wnD2ZE+l+SPC/uoS0vXeE9L1+0wuaMqKlfz9AMUo38JsyLSBWSFcHR1Rri62LZc12vLr1gb3jl7iwQhgwpAbGQ== + simple-concat@^1.0.0: version "1.0.1" resolved "https://registry.yarnpkg.com/simple-concat/-/simple-concat-1.0.1.tgz#f46976082ba35c2263f1c8ab5edfe26c41c9552f" @@ -449,6 +1063,28 @@ simple-get@^4.0.0: once "^1.3.1" simple-concat "^1.0.0" +smart-buffer@^4.2.0: + version "4.2.0" + resolved "https://registry.yarnpkg.com/smart-buffer/-/smart-buffer-4.2.0.tgz#6e1d71fa4f18c05f7d0ff216dd16a481d0e8d9ae" + integrity 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"https://registry.yarnpkg.com/source-map/-/source-map-0.6.1.tgz#74722af32e9614e9c287a8d0bbde48b5e2f1a263" integrity sha512-UjgapumWlbMhkBgzT7Ykc5YXUT46F0iKu8SGXq0bcwP5dz/h0Plj6enJqjz1Zbq2l5WaqYnrVbwWOWMyF3F47g== +sprintf-js@^1.1.3: + version "1.1.3" + resolved "https://registry.yarnpkg.com/sprintf-js/-/sprintf-js-1.1.3.tgz#4914b903a2f8b685d17fdf78a70e917e872e444a" + integrity sha512-Oo+0REFV59/rz3gfJNKQiBlwfHaSESl1pcGyABQsnnIfWOFt6JNj5gCog2U6MLZ//IGYD+nA8nI+mTShREReaA== + sqlite-regex-darwin-arm64@0.2.3: version "0.2.3" resolved "https://registry.yarnpkg.com/sqlite-regex-darwin-arm64/-/sqlite-regex-darwin-arm64-0.2.3.tgz#10dc1f66aefa62488234f84d81e7f92d58e81b64" @@ -510,6 +1151,22 @@ sqlite-url@^0.1.0: sqlite-url-darwin-x64 "0.1.0" sqlite-url-linux-x64 "0.1.0" +ssri@^9.0.0: + version "9.0.1" + resolved "https://registry.yarnpkg.com/ssri/-/ssri-9.0.1.tgz#544d4c357a8d7b71a19700074b6883fcb4eae057" + integrity sha512-o57Wcn66jMQvfHG1FlYbWeZWW/dHZhJXjpIcTfXldXEk5nz5lStPo3mK0OJQfGR3RbZUlbISexbljkJzuEj/8Q== + dependencies: + minipass "^3.1.1" + +"string-width@^1.0.2 || 2 || 3 || 4", string-width@^4.2.3: + version "4.2.3" + resolved "https://registry.yarnpkg.com/string-width/-/string-width-4.2.3.tgz#269c7117d27b05ad2e536830a8ec895ef9c6d010" + integrity sha512-wKyQRQpjJ0sIp62ErSZdGsjMJWsap5oRNihHhu6G7JVO/9jIB6UyevL+tXuOqrng8j/cxKTWyWUwvSTriiZz/g== + dependencies: + emoji-regex "^8.0.0" + is-fullwidth-code-point "^3.0.0" + strip-ansi "^6.0.1" + string_decoder@^1.1.1: version "1.3.0" resolved "https://registry.yarnpkg.com/string_decoder/-/string_decoder-1.3.0.tgz#42f114594a46cf1a8e30b0a84f56c78c3edac21e" @@ -517,6 +1174,13 @@ string_decoder@^1.1.1: dependencies: safe-buffer "~5.2.0" +strip-ansi@^6.0.1: + version "6.0.1" + resolved "https://registry.yarnpkg.com/strip-ansi/-/strip-ansi-6.0.1.tgz#9e26c63d30f53443e9489495b2105d37b67a85d9" + integrity 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"https://registry.yarnpkg.com/universalify/-/universalify-2.0.0.tgz#75a4984efedc4b08975c5aeb73f530d02df25717" @@ -571,6 +1266,33 @@ util-deprecate@^1.0.1: resolved "https://registry.yarnpkg.com/util-deprecate/-/util-deprecate-1.0.2.tgz#450d4dc9fa70de732762fbd2d4a28981419a0ccf" integrity sha512-EPD5q1uXyFxJpCrLnCc1nHnq3gOa6DZBocAIiI2TaSCA7VCJ1UJDMagCzIkXNsUYfD1daK//LTEQ8xiIbrHtcw== +webidl-conversions@^3.0.0: + version "3.0.1" + resolved "https://registry.yarnpkg.com/webidl-conversions/-/webidl-conversions-3.0.1.tgz#24534275e2a7bc6be7bc86611cc16ae0a5654871" + integrity sha512-2JAn3z8AR6rjK8Sm8orRC0h/bcl/DqL7tRPdGZ4I1CjdF+EaMLmYxBHyXuKL849eucPFhvBoxMsflfOb8kxaeQ== + +whatwg-url@^5.0.0: + version "5.0.0" + resolved "https://registry.yarnpkg.com/whatwg-url/-/whatwg-url-5.0.0.tgz#966454e8765462e37644d3626f6742ce8b70965d" + integrity sha512-saE57nupxk6v3HY35+jzBwYa0rKSy0XR8JSxZPwgLr7ys0IBzhGviA1/TUGJLmSVqs8pb9AnvICXEuOHLprYTw== + dependencies: + tr46 "~0.0.3" + webidl-conversions "^3.0.0" + 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