From b89505f29b806a4241cb6c74c045faa0843ccc33 Mon Sep 17 00:00:00 2001 From: J Montgomery Maxwell Date: Wed, 11 Dec 2024 09:40:16 -0600 Subject: [PATCH 1/4] update notebooks and tutorial ws --- .../manifests/hatchery/hatchery.json | 16 +++++++++------- 1 file changed, 9 insertions(+), 7 deletions(-) diff --git a/preprod.healdata.org/manifests/hatchery/hatchery.json b/preprod.healdata.org/manifests/hatchery/hatchery.json index 33eee6c366..a58e6bc6af 100644 --- a/preprod.healdata.org/manifests/hatchery/hatchery.json +++ b/preprod.healdata.org/manifests/hatchery/hatchery.json @@ -142,17 +142,19 @@ "cpu-limit": "1.0", "memory-limit": "2Gi", "name": "(Tutorials) Example Analysis Jupyter Lab Notebooks", - "image": "quay.io/cdis/heal-notebooks:combined_tutorials__c3f43a1b8e058be76a9d998a7009e270dce04e6f", + "image": "quay.io/cdis/heal-notebooks:combined_tutorials__2af985287624f57d2276f4e7eecb8793735b95ed", "env": { "FRAME_ANCESTORS": "https://preprod.healdata.org" }, "args": [ - "--NotebookApp.base_url=/lw-workspace/proxy/", - "--NotebookApp.default_url=/lab", - "--NotebookApp.password=''", - "--NotebookApp.token=''", - "--NotebookApp.shutdown_no_activity_timeout=5400", - "--NotebookApp.quit_button=False" + "--JupyterNotebookApp.base_url=/lw-workspace/proxy/", + "--JupyterNotebookApp.default_url=/lab", + "--JupyterNotebookApp.password=''", + "--JupyterNotebookApp.token=''", + "--JupyterNotebookApp.ip='*'", + "--JupyterNotebookApp.notebook_dir='/home/jovyan'", + "--JupyterNotebookApp.shutdown_no_activity_timeout=3600", + "--JupyterNotebookApp.quit_button=False" ], "command": [ "start-notebook.sh" From da3ac58bbc904d31c11074a08ab5c93d0e094276 Mon Sep 17 00:00:00 2001 From: J Maxwell Date: Fri, 24 Jan 2025 15:30:57 -0600 Subject: [PATCH 2/4] update heal tutorial ws --- preprod.healdata.org/manifests/hatchery/hatchery.json | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/preprod.healdata.org/manifests/hatchery/hatchery.json b/preprod.healdata.org/manifests/hatchery/hatchery.json index f6f844fb68..67c7e1d2a9 100644 --- a/preprod.healdata.org/manifests/hatchery/hatchery.json +++ b/preprod.healdata.org/manifests/hatchery/hatchery.json @@ -153,7 +153,7 @@ "cpu-limit": "1.0", "memory-limit": "2Gi", "name": "(Tutorials) Example Analysis Jupyter Lab Notebooks", - "image": "quay.io/cdis/heal-notebooks:combined_tutorials__2af985287624f57d2276f4e7eecb8793735b95ed", + "image": "quay.io/cdis/heal-notebooks:combined_tutorials__22ec8d31c349ea76590d1071e8ceb1072eb69c72", "env": { "FRAME_ANCESTORS": "https://preprod.healdata.org" }, From 10f9704ee0639c2744ca355fc3598c2e6953866c Mon Sep 17 00:00:00 2001 From: burtonk <117617405+k-burt-uch@users.noreply.github.com> Date: Fri, 24 Jan 2025 16:45:15 -0600 Subject: [PATCH 3/4] Update manifest.json --- staging.gen3.biodatacatalyst.nhlbi.nih.gov/manifest.json | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/staging.gen3.biodatacatalyst.nhlbi.nih.gov/manifest.json b/staging.gen3.biodatacatalyst.nhlbi.nih.gov/manifest.json index 9dff3cea00..31691f2c9c 100644 --- a/staging.gen3.biodatacatalyst.nhlbi.nih.gov/manifest.json +++ b/staging.gen3.biodatacatalyst.nhlbi.nih.gov/manifest.json @@ -19,7 +19,7 @@ "revproxy": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/nginx:2025.01", "sheepdog": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/sheepdog:2025.01", "metadata": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/metadata-service:2025.01", - "portal": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/data-portal:2025.01", + "portal": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/data-portal:feature_data_library", "fluentd": "fluent/fluentd-kubernetes-daemonset:v1.15.3-debian-cloudwatch-1.0", "spark": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/gen3-spark:2025.01", "tube": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/tube:2025.01", @@ -383,4 +383,4 @@ "targetCpu": 40 } } -} \ No newline at end of file +} From 9e186a1f2c3643ac794be3cd546b6fc1fa39d8e1 Mon Sep 17 00:00:00 2001 From: Jian <52763034+tianj7@users.noreply.github.com> Date: Fri, 24 Jan 2025 16:58:15 -0600 Subject: [PATCH 4/4] revert cohort middleware version (#8304) * revert cohort middleware version * Update manifest.json --- va-testing.data-commons.org/manifest.json | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/va-testing.data-commons.org/manifest.json b/va-testing.data-commons.org/manifest.json index 3c171d19a5..1b4f820858 100644 --- a/va-testing.data-commons.org/manifest.json +++ b/va-testing.data-commons.org/manifest.json @@ -27,7 +27,7 @@ "revproxy": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/nginx:2025.01", "sheepdog": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/sheepdog:2025.01", "ssjdispatcher": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/ssjdispatcher:2025.01", - "wts": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/workspace-token-service:2025.01" + "wts": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/workspace-token-service:2025.01.24" }, "global": { "environment": "va-testing",