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Feat/add vlmd extract#14

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george42-ctds wants to merge 42 commits intomasteruc-cdis/heal-platform-sdk:masterfrom feat/add-vlmd-extractuc-cdis/heal-platform-sdk:feat/add-vlmd-extractCopy head branch name to clipboard

+3,335-996

Commits

Commits on Oct 24, 2024

• (HP-1727): add validation of json object for extract

  george42-ctds

  committed
  2f29ca3

Commits on Oct 29, 2024

• (HP-1727): move get_schema to after checking input

  george42-ctds

  committed
  8a96343

• (HP-1727): move some utils from validate to parent directory

  george42-ctds

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  943154e

• (HP-1727): handle array data in csv validation

  george42-ctds

  committed
  11084ba

• (HP-1727): add file_utils

  george42-ctds

  committed
  e4bfe73

• (HP-1727): update config for extract

  george42-ctds

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  10e4a56

• (HP-1727): remove unused import

  george42-ctds

  committed
  c7968cd

• (HP-1727): add mappings

  george42-ctds

  committed
  29cf039

• (HP-1727): add extract utils

  george42-ctds

  committed
  030c263

Commits on Oct 30, 2024

• (HP-1727): add extract module

  george42-ctds

  committed
  5da921a

Commits on Oct 31, 2024

• (HP-1727): fix ValidationError handling

  george42-ctds

  committed
  c96b520

• (HP-1727): clean up exceptions

  george42-ctds

  committed
  ee6db2a

• (HP-1727): add unit tests for conversion

  george42-ctds

  committed
  e552a56

• (HP-1727): add unit tests

  george42-ctds

  committed
  6fbf7f8

• (HP-1727): change case in logger name

  george42-ctds

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  0d09bc4

• (HP-1727): update READMEs

  george42-ctds

  committed
  ad13dfe

• (HP-1727): add unit tests for conversion

  george42-ctds

  committed
  df031d3

Commits on Nov 1, 2024

• (HP-1727): add unit test for file writing

  george42-ctds

  committed
  32d7281

Commits on Nov 5, 2024

• Update contact e-mail, re-lock

  george42-ctds

  committed
  9f88142

Commits on Dec 17, 2024

• (HP-1827): update constraint type from string to integer in csv schema

  george42-ctds

  committed
  51acbf8

• (HP-1827): add new test data

  george42-ctds

  committed
  9ad2e5e

• (HP-1827): handle empty output_dir

  george42-ctds

  committed
  af516d5

• (HP-1827): move read method to utils

  george42-ctds

  committed
  485ef79

• (HP-1827): add new validate_extract module

  george42-ctds

  committed
  83fcd21

• (HP-1827): add new tests for validate_extract module

  george42-ctds

  committed
  2b559e2

• (HP-1827): add fixes for existing extract and validate modules

  george42-ctds

  committed
  e975cf8

• (HP-1827): update vlmd README to describe combined validate_extract

  george42-ctds

  committed
  7c120de

Commits on Dec 19, 2024

• (HP-1827) raise error for zero-length converted csv data

  george42-ctds

  committed
  caba140

• (HP-1827) remove unneeded test code

  george42-ctds

  committed
  25b822e

• (HP-1827) remove replicated extract and validate code

  george42-ctds

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  e19b5a9

• (HP-1827) update import to use new combined module

  george42-ctds

  committed
  d9bc46e

• (HP-1827) removed duplicated test

  george42-ctds

  committed
  dc854ee

Commits on Dec 23, 2024

• (HP-1827) recover extract, leave logic in validate

  george42-ctds

  committed
  47acef8

• (HP-1827) recover tests for extract

  george42-ctds

  committed
  10178ee

• (HP-1827) recover extract in README

  george42-ctds

  committed
  8796a5e

• (HP-1827) remove unused imports

  george42-ctds

  committed
  79a8a01

• (HP-1827) add test for additional properties

  george42-ctds

  committed
  46b08f9

• (HP-1827) add input file for new test

  george42-ctds

  committed
  2b0b51e

Commits on Jan 7, 2025

• (HP-1827) Change variable names to snake case

  george42-ctds

  committed
  dc2c0d1

• (HP-1827) Change variable names to snake case

  george42-ctds

  committed
  5f816fa

Commits on Jan 8, 2025

• (HP-1827) raise error for non-integer array index, add unit test

  george42-ctds

  committed
  cc771ed

• (HP-1827) use regex for checking array indexing in prop names

  george42-ctds

  committed
  330463a