pyproject.toml

[build-system]
requires = [
    "hatchling",
    "hatch-fancy-pypi-readme",
]
build-backend = "hatchling.build"

[project]
name = "libertem"
dynamic = ["version", "readme"]
description = "Open pixelated STEM framework"
license-files = { paths = ["LICENSE", "src/libertem/common/LICENSE"] }
requires-python = ">=3.9.3"
authors = [
    { name = "the LiberTEM team", email = "libertem-dev@googlegroups.com" },
]
keywords = [
    "electron",
    "microscopy",
]
classifiers = [
    "Development Status :: 5 - Production/Stable",
    "Environment :: Console",
    "Environment :: Web Environment",
    "Intended Audience :: Developers",
    "Intended Audience :: End Users/Desktop",
    "Intended Audience :: Science/Research",
    "License :: OSI Approved :: GNU General Public License v3 (GPLv3)",
    "License :: OSI Approved :: MIT License",
    "Natural Language :: English",
    "Operating System :: MacOS :: MacOS X",
    "Operating System :: Microsoft :: Windows",
    "Operating System :: POSIX :: Linux",
    "Programming Language :: JavaScript",
    "Programming Language :: Python :: 3.9",
    "Programming Language :: Python :: 3.10",
    "Programming Language :: Python :: 3.11",
    "Programming Language :: Python :: 3.12",
    "Topic :: Scientific/Engineering",
    "Topic :: Scientific/Engineering :: Physics",
    "Topic :: Scientific/Engineering :: Visualization",
]
dependencies = [
    "autopep8",
    "click",
    "cloudpickle",
    "dask!=2023.6.1",
    "defusedxml",
    "distributed>=2.19.0",
    "empyre>=0.3.0",
    "h5py",
    "ipympl",
    "jsonschema",
    "jupyter_ui_poll",
    "matplotlib",
    "nbconvert",
    "nbformat",
    "ncempy>=1.10",
    # Minimum constraints of numba for all Python versions we support
    # See https://numba.readthedocs.io/en/stable/release-notes-overview.html
    "numba>=0.53;python_version < '3.10'",
    "numba>=0.55;python_version < '3.11'",
    "numba>=0.57;python_version < '3.12'",
    "numba>=0.59;python_version < '3.13'",
    # for any future Python release, constrain numba to a recent version,
    # otherwise, version resolution might try to install an ancient version
    # that isn't constrained properly:
    "numba>=0.61;python_version >= '3.13'",  
    "numexpr!=2.8.6",
    "numpy",
    "opentelemetry-api",
    "pillow",
    "psutil",
    "pywin32!=226;platform_system==\"Windows\"",
    "scikit-image",
    "scikit-learn",
    "scipy>=1.4.1",
    "sparse",
    "sparseconverter>=0.4.0",
    "tblib",
    "threadpoolctl>=3.0",
    "tomli",
    "tornado>=5",
    "tqdm",
    "typing-extensions",
]

[project.optional-dependencies]
bqplot = [
    "bqplot",
    "bqplot-image-gl",
    "ipython",
]
cupy = [
    "cupy",
]
hdbscan = [
    "hdbscan;( python_version!='3.11' or platform_system!='Windows')",
    "hdbscan<=0.8.30;( python_version=='3.11' and platform_system=='Windows')",
]
hdf5plugin = [
    "hdf5plugin",
]
torch = [
    "torch<1.12",
]
tracing = [
    "opentelemetry-distro",
    "opentelemetry-exporter-otlp",
]

[project.scripts]
libertem-server = "libertem.web.cli:main"
libertem-worker = "libertem.executor.cli:main"

[project.urls]
Repository = "https://github.com/LiberTEM/LiberTEM"
Homepage = "https://libertem.github.io/LiberTEM/"

[tool.hatch.version]
path = "src/libertem/__version__.py"

[tool.hatch.build.targets.wheel]
artifacts = [
    "/src/libertem/_baked_revision.py",
]

[tool.hatch.build.targets.sdist]
artifacts = [
    "/src/libertem/_baked_revision.py",
]
include = [
    "/src",
    "/tests",
    "/client/src",
    "/client/public",
    "/client/types",
    "/client/README.md",
    "/client/*.*js*",
    "/LICENSE",
    "/README.rst",
    "/pytest.ini",
    "/conftest.py",
    "/test_requirements.txt",
    "/override_requirements.txt",
    "/tox.ini",
    "/.flake8",
]
exclude = [
    "*.pyc",
    "*.nbi",
    "*.nbc",
    "__pycache__",
    ".mypy_cache",
]

[tool.hatch.build.hooks.custom]
# this enables hatch_build.py

[tool.hatch.metadata.hooks.fancy-pypi-readme]
"content-type" = "text/x-rst"

[[tool.hatch.metadata.hooks.fancy-pypi-readme.fragments]]
path = "README.rst"

[[tool.hatch.metadata.hooks.fancy-pypi-readme.substitutions]]
pattern = ":(cite|doc):`[^`]+` ?"
replacement = ""

[tool.coverage.run]
branch = true
include = [
    "src/"
]

[tool.coverage.report]
# Regexes for lines to exclude from consideration
exclude_lines = [
    # Have to re-enable the standard pragma
    "pragma: no cover",

    # Don't complain about missing debug-only code:
    "def __repr__",
    "if self.debug",

    # Don't complain about typing branches:
    "if TYPE_CHECKING",
    "if typing.TYPE_CHECKING",

    # Don't complain if tests don't hit defensive assertion code:
    "raise AssertionError",
    "raise NotImplementedError",

    # Don't complain if non-runnable code isn't run:
    "if 0:",
    "if False:",
    "if __name__ == .__main__.:",
]