diff --git a/.github/Doxyfile-cpp b/.github/Doxyfile-cpp
index c13e9bf..6c7fbb3 100644
--- a/.github/Doxyfile-cpp
+++ b/.github/Doxyfile-cpp
@@ -32,7 +32,7 @@ DOXYFILE_ENCODING      = UTF-8
 # title of most generated pages and in a few other places.
 # The default value is: My Project.
 
-PROJECT_NAME           = "YASMIN (Yet Another State MachINe)"
+PROJECT_NAME           = "C++ YASMIN (Yet Another State MachINe)"
 
 # The PROJECT_NUMBER tag can be used to enter a project or revision number. This
 # could be handy for archiving the generated documentation or if some version
@@ -864,7 +864,9 @@ WARN_LOGFILE           =
 # spaces. See also FILE_PATTERNS and EXTENSION_MAPPING
 # Note: If this tag is empty the current directory is searched.
 
-INPUT                  =
+INPUT                  = yasmin \
+                         yasmin_ros \
+                         yasmin_viewer
 
 # This tag can be used to specify the character encoding of the source files
 # that doxygen parses. Internally doxygen uses the UTF-8 encoding. Doxygen uses
diff --git a/.github/Doxyfile-python b/.github/Doxyfile-python
index d48aab7..2caed28 100644
--- a/.github/Doxyfile-python
+++ b/.github/Doxyfile-python
@@ -32,7 +32,7 @@ DOXYFILE_ENCODING      = UTF-8
 # title of most generated pages and in a few other places.
 # The default value is: My Project.
 
-PROJECT_NAME           = "YASMIN (Yet Another State MachINe)"
+PROJECT_NAME           = "Python YASMIN (Yet Another State MachINe)"
 
 # The PROJECT_NUMBER tag can be used to enter a project or revision number. This
 # could be handy for archiving the generated documentation or if some version
@@ -864,7 +864,9 @@ WARN_LOGFILE           =
 # spaces. See also FILE_PATTERNS and EXTENSION_MAPPING
 # Note: If this tag is empty the current directory is searched.
 
-INPUT                  =
+INPUT                  = yasmin \
+                         yasmin_ros \
+                         yasmin_viewer
 
 # This tag can be used to specify the character encoding of the source files
 # that doxygen parses. Internally doxygen uses the UTF-8 encoding. Doxygen uses
diff --git a/.github/workflows/doxygen-doc-cpp.yml b/.github/workflows/doxygen-doc-cpp.yml
index 89a14b0..ee63ba3 100644
--- a/.github/workflows/doxygen-doc-cpp.yml
+++ b/.github/workflows/doxygen-doc-cpp.yml
@@ -15,6 +15,6 @@ jobs:
       - uses: DenverCoder1/doxygen-github-pages-action@v2.0.0
         with:
           github_token: ${{ secrets.DOXYGEN_DEPLOY_TOKEN }}
-          branch: gh-pages
+          branch: gh-pages-cpp
           config_file: ./.github/Doxyfile-cpp
           doxygen_version: 1.9.6
diff --git a/.github/workflows/doxygen-doc-python.yml b/.github/workflows/doxygen-doc-python.yml
index 74582e0..2fbc3ca 100644
--- a/.github/workflows/doxygen-doc-python.yml
+++ b/.github/workflows/doxygen-doc-python.yml
@@ -15,6 +15,6 @@ jobs:
       - uses: DenverCoder1/doxygen-github-pages-action@v2.0.0
         with:
           github_token: ${{ secrets.DOXYGEN_DEPLOY_TOKEN }}
-          branch: gh-pages
+          branch: gh-pages-python
           config_file: ./.github/Doxyfile-python
           doxygen_version: 1.9.6