From 1549bc947c3cfd59cbe343853071be643bfdd7b2 Mon Sep 17 00:00:00 2001
From: pdiakumis <peterdiakumis@gmail.com>
Date: Sat, 18 Nov 2023 14:32:20 +1100
Subject: [PATCH] use umccr conda channel

---
 .github/workflows/conda_docker_pkgdown.yml |  2 +-
 deploy/conda/recipe/meta.yaml              | 12 ++++++------
 2 files changed, 7 insertions(+), 7 deletions(-)

diff --git a/.github/workflows/conda_docker_pkgdown.yml b/.github/workflows/conda_docker_pkgdown.yml
index 4d2d802d..e292d2a3 100644
--- a/.github/workflows/conda_docker_pkgdown.yml
+++ b/.github/workflows/conda_docker_pkgdown.yml
@@ -32,7 +32,7 @@ jobs:
           environment-file: ${{ env.env_yaml_path }}/condabuild.yaml
       - name: 🐍 Conda pkg build and upload
         run: |
-          conda mambabuild ${recipe_path} --token ${atoken}
+          conda mambabuild ${recipe_path} -c umccr -c conda-forge -c bioconda --token ${atoken}
       - name: 🔒 Conda lock
         run: |
           # 1. generate a combined lock file
diff --git a/deploy/conda/recipe/meta.yaml b/deploy/conda/recipe/meta.yaml
index b2e5049a..1bc0399b 100644
--- a/deploy/conda/recipe/meta.yaml
+++ b/deploy/conda/recipe/meta.yaml
@@ -31,12 +31,12 @@ requirements:
     - r-ggforce
     - r-ggplot2
     - r-glue
-    - r-gpgr
+    - umccr::r-gpgr
     - r-htmltools
     - r-htmlwidgets
     - r-knitr
     - bioconductor-limma ==3.50.1
-    - r-manhattanly # grab for R v4.1 from umccr
+    - umccr::r-manhattanly # grab for R v4.1 from umccr
     - r-matrixstats ==0.61.0
     - r-optparse
     - r-pdftools
@@ -48,7 +48,7 @@ requirements:
     - r-readr
     - r-rlang
     - r-rmarkdown
-    - r-rnasum.data
+    - umccr::r-rnasum.data
     - r-scales
     - r-sessioninfo
     - r-stringr
@@ -71,12 +71,12 @@ requirements:
     - r-ggforce
     - r-ggplot2
     - r-glue
-    - r-gpgr
+    - umccr::r-gpgr
     - r-htmltools
     - r-htmlwidgets
     - r-knitr
     - bioconductor-limma ==3.50.1
-    - r-manhattanly # grab for R v4.1 from umccr
+    - umccr::r-manhattanly # grab for R v4.1 from umccr
     - r-matrixstats ==0.61.0
     - r-optparse
     - r-pdftools
@@ -88,7 +88,7 @@ requirements:
     - r-readr
     - r-rlang
     - r-rmarkdown
-    - r-rnasum.data
+    - umccr::r-rnasum.data
     - r-scales
     - r-sessioninfo
     - r-stringr