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Add support for transcript level counts in R-package code #137

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skanwal opened this issue Mar 1, 2024 · 0 comments

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skanwal commented Mar 1, 2024

Currently we allow gene level counts https://github.com/umccr/RNAsum/blob/rnasum-rpackage/R/sample_data.R#L49.
It'll be useful to add support for transcript level counts since we already are using annotationhub for ensembl db query.

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Include a check for quant.sf file #143

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