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Updated getting started to contain the workflow run and optimisation scripts * Added new scripts to the commands docs
Register run instance commands are no longer 'pending'
reorganize TOC
minor typo
add maintainer commands
Add to category commands
Wiki updates * Added linked projects as a command in commands.md * Updated Sidebar to include GH Actions under 'Development' tab * Added extra line on formatting in contribution guide
Added in non-project sync commands
Updated wiki to reflect latest changes for beta release * Split commands by type in commands md * Added information on how to set the api-key collection command. * Updated the configuration file, removed unused configuration.yaml
Schema and expression and category inclusions Also added --username and --useremail parameters to cwl-ica configure commands
Create from template tools
First commit to wiki added the following files * Home.md * Structured home page * _Sidebar.md * For a decent looking and ordered sidebar * Best Practises guide * More work to be done here. * Need to link more between here and Contributions. * Commands * Initialised first major list of commands. * Configure * Show how configuration files should look like. * Contributions: * Initialised how contributions file should look. * Getting started guide: * Set up getting started guide.