omniscape 122

[bennn]

dear diary, I was able to run Omniscape with the input data from that issue (122).

My main file:

using Omniscape

cd("examples/omniscape/")
run_omniscape("github_example.ini")

It took 1 hr. Terminal output:

[ Info: Starting up Omniscape with 1 workers and double precision
[ Info: Using Circuitscape with the cg+amg solver...
[ Info: Calculating block artifact correction array...
[ Info: Solving moving window targets...
Progress: 100%|██████████████████████████████████████████████████| Time: 0:56:47
[ Info: Time taken to complete job: 3417.913 seconds
[ Info: Outputs written to /home/ben/code/uu/fpx/examples/examples/omniscape/conditional_Australia

Generated a folder conditional_Australia with .tif images. Imagemagick complained about unknown fields but was able to convert them to images:

$ for X in *.tif ; do echo ${X} ; convert ${X} ${X}.jpeg ; done
cum_currmap.tif
convert: Unknown field with tag 33550 (0x830e) encountered. `TIFFReadDirectory' @ warning/tiff.c/TIFFWarnings/995.
convert: Unknown field with tag 33922 (0x8482) encountered. `TIFFReadDirectory' @ warning/tiff.c/TIFFWarnings/995.
convert: Unknown field with tag 34735 (0x87af) encountered. `TIFFReadDirectory' @ warning/tiff.c/TIFFWarnings/995.
convert: Unknown field with tag 34736 (0x87b0) encountered. `TIFFReadDirectory' @ warning/tiff.c/TIFFWarnings/995.
convert: Unknown field with tag 34737 (0x87b1) encountered. `TIFFReadDirectory' @ warning/tiff.c/TIFFWarnings/995.
convert: Unknown field with tag 42113 (0xa481) encountered. `TIFFReadDirectory' @ warning/tiff.c/TIFFWarnings/995.
flow_potential.tif
convert: Unknown field with tag 33550 (0x830e) encountered. `TIFFReadDirectory' @ warning/tiff.c/TIFFWarnings/995.
convert: Unknown field with tag 33922 (0x8482) encountered. `TIFFReadDirectory' @ warning/tiff.c/TIFFWarnings/995.
convert: Unknown field with tag 34735 (0x87af) encountered. `TIFFReadDirectory' @ warning/tiff.c/TIFFWarnings/995.
convert: Unknown field with tag 34736 (0x87b0) encountered. `TIFFReadDirectory' @ warning/tiff.c/TIFFWarnings/995.
convert: Unknown field with tag 34737 (0x87b1) encountered. `TIFFReadDirectory' @ warning/tiff.c/TIFFWarnings/995.
convert: Unknown field with tag 42113 (0xa481) encountered. `TIFFReadDirectory' @ warning/tiff.c/TIFFWarnings/995.
normalized_cum_currmap.tif
convert: Unknown field with tag 33550 (0x830e) encountered. `TIFFReadDirectory' @ warning/tiff.c/TIFFWarnings/995.
convert: Unknown field with tag 33922 (0x8482) encountered. `TIFFReadDirectory' @ warning/tiff.c/TIFFWarnings/995.
convert: Unknown field with tag 34735 (0x87af) encountered. `TIFFReadDirectory' @ warning/tiff.c/TIFFWarnings/995.
convert: Unknown field with tag 34736 (0x87b0) encountered. `TIFFReadDirectory' @ warning/tiff.c/TIFFWarnings/995.
convert: Unknown field with tag 34737 (0x87b1) encountered. `TIFFReadDirectory' @ warning/tiff.c/TIFFWarnings/995.
convert: Unknown field with tag 42113 (0xa481) encountered. `TIFFReadDirectory' @ warning/tiff.c/TIFFWarnings/995.

The images are gross:

Next up, I'll try running with FloatTracker!