latest release is broken

[fountaindive]

Description

Installing the latest release produces quite a few errors. Is there any chance you could fix them?

e.g. in synthcity/plugins/core/models/survival_analysis/metrics.py I had to update

from scipy.integrate import trapz to from scipy.integrate import trapezoid as trapz

I also needed to install a specific version of pydantic. See this issue

I also needed to edit synthcity/plugins/core/models/tabular_encoder.py go to the OrdinalEncoder and change sparse -> sparse_output

Many thanks!

How to Reproduce

ENV_NAME=py312
conda create -y --name $ENV_NAME python=3.12
conda activate $ENV_NAME
python -m pip install synthcity

Then in python try using synthcity

from synthcity.plugins import Plugins

with traceback

  File "/Users/<USERNAME>/anaconda3/envs/py312/lib/python3.12/site-packages/synthcity/plugins/core/models/survival_analysis/metrics.py", line 8, in <module>
    from scipy.integrate import trapz
ImportError: cannot import name 'trapz' from 'scipy.integrate' (/Users/<USERNAME>/anaconda3/envs/py312/lib/python3.12/site-packages/scipy/integrate/__init__.py)

however, after you fix this trapz error you also get the OrdinalEncoder error when you try to fit a model

Expected Behavior

A clear and concise description of what you expected to happen.

Screenshots

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System Information

• OS: mac
• OS Version: 14.6.1
• Language Version: python 3.12
• Package Manager Version: conda 24.1.2

Additional Context

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[robsdavis]

Hi @fountaindive, Unfortunately synthcity does not yet support python 3.12. Please try with python 3.10 to be sure everything works

[fountaindive]

Hi @robsdavis thanks for getting back to me!

I tried again using python 3.10 but got the same error

ImportError: cannot import name 'trapz' from 'scipy.integrate' (/Users/<USERNAME>/anaconda3/envs/py310/lib/python3.10/site-packages/scipy/integrate/__init__.py)