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Questions on .bed File Format in chess extract with Sparse Input #64

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liuyc27 opened this issue Jan 6, 2025 · 0 comments
Open

Questions on .bed File Format in chess extract with Sparse Input #64

liuyc27 opened this issue Jan 6, 2025 · 0 comments

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@liuyc27
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liuyc27 commented Jan 6, 2025

I have a question about the chess extract command. When using sparse format files as input, could you kindly explain the expected format of the .bed files for the --reference-regions and --query-regions options? Also, could you please explain the role of these regions in this context?

Thank you very much for your help!
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