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This repository has been archived by the owner on Jan 24, 2024. It is now read-only.

v0.27

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@holtgrewe holtgrewe released this 20 Sep 08:22
· 21 commits to main since this release

IMPORTANT COMPATIBILITY NOTE:
For annotating SVs, the output of this version is not compatible with varfish-server v1.2 (Anthenea) and early versions of the v2 (Bollonaster) development branch.
You can generate compatible files by adding the --opt-out=chrom2-columns,dbcounts-columns,callers-array as arguments to annotate-svs.

  • Writing out proper SV type for Dragen CNV (#76)
  • Adding support for depth of coverage annotation (#73)
  • Ensure output files are sorted by chromosomes (#79)
  • Handle multiple input VCFs in annotate-svs with filtering (#75)
  • Write out SV callers as array (#81)