This repository has been archived by the owner on Jan 24, 2024. It is now read-only.
v0.28
- Write out
FORMAT/SQ
in the case that is present andFORMAT/GQ
is not (#84).
If neither is set, then write out0
.
Write out0
forAD
andDP
as well if missing.
This improves compatibility with Manta. - Suppress BND records that point to non-allow-listed contigs (#85).
This is required for processing Manta and Delly2 results, for example.