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Request for guide #54

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trajkumarkvp opened this issue Apr 25, 2023 · 7 comments
Open

Request for guide #54

trajkumarkvp opened this issue Apr 25, 2023 · 7 comments

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@trajkumarkvp
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Dear Sir,
Kindly share the installation and configuration guide.

@chenejac
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@trajkumarkvp
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Dear Sir,
Thank you so much for your prompt response. I have tried many times to extract the data from pubmed, scopus and WOS through vivo harvester but it is not working. I request you kindly help us.

@trajkumarkvp
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Hello @trajkumarkvp Guidelines should be available at https://wiki.lyrasis.org/display/VIVO/VIVO+Harvester+User+Guide+1.0 https://wiki.lyrasis.org/display/VIVO/VIVO+Harvester

Dear I have tried version 1.3 harvester. I request you to kindly provide provide the proper guidance to extract the data from pubmed, scopus and WOS>

@gneissone
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@trajkumarkvp unfortunately the harvester has not been updated in many years. If you could please provide the errors you are seeing that may be a starting point, but quite likely each Harvester library will need to be updated to work.

@trajkumarkvp
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@trajkumarkvp unfortunately the harvester has not been updated in many years. If you could please provide the errors you are seeing that may be a starting point, but quite likely each Harvester library will need to be updated to work.

Dear Sir, I don't know how to configure the Pubmed Fetch Files, Scopus Fetch Files. Do you have any idea about those things

@trajkumarkvp
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@trajkumarkvp unfortunately the harvester has not been updated in many years. If you could please provide the errors you are seeing that may be a starting point, but quite likely each Harvester library will need to be updated to work.

Dear Sir, I don't know how to configure the Pubmed Fetch Files, Scopus Fetch Files. Do you have any idea about those things

2023-04-25 22:38:56.964 ERROR [o.v.h.f.PubmedFetch] NIH Fetch ESearch failed with error:

@trajkumarkvp
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Full Logging in example-pubmed.2023-04-26T00:04:18.log
/opt/vivo/harvester/example-scripts/bash-scripts/full-harvest-examples/1.0-1.5-examples/example-pubmed/run-pubmed.sh: line 61: harvester-pubmedfetch: command not found

Anyone pls help me

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