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Motif selection bam read error #19

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sammilee898 opened this issue Mar 31, 2020 · 2 comments
Open

Motif selection bam read error #19

sammilee898 opened this issue Mar 31, 2020 · 2 comments

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@sammilee898
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Hello, I am trying to run the program and am coming across this error. Do you have any advice?

$ variant Sorted20130SAMy43Aligned.bam --motif Telomotifs.txt -b -o TelofromSorted.bam
...making the AhoCorasick trie from Telomotifs.txt
...finished making AhoCorasick trie with 1 motifs
removeElem: elem of value -1 is below min bin 0,0,0
@Johnsonzcode
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Same error. How to fix it ?

@sbrohee
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sbrohee commented Jun 7, 2022

Got the same error since I've switched from bcl2fastq to bcl-convert. Which demultiplexing tool are you using?

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@Johnsonzcode @sbrohee @sammilee898