From 5e8be98f20f7b8a3dbde3f2fd6b1a70a299a78ac Mon Sep 17 00:00:00 2001
From: Erik Garrison <erik.garrison@gmail.com>
Date: Thu, 27 Jun 2024 17:57:03 +0200
Subject: [PATCH] be quiet inversion patcher

---
 src/common/wflign/src/wflign_patch.cpp | 2 ++
 1 file changed, 2 insertions(+)

diff --git a/src/common/wflign/src/wflign_patch.cpp b/src/common/wflign/src/wflign_patch.cpp
index 989e8525..8433ad32 100644
--- a/src/common/wflign/src/wflign_patch.cpp
+++ b/src/common/wflign/src/wflign_patch.cpp
@@ -296,6 +296,7 @@ void do_wfa_patch_alignment(
     if (rev_aln.ok && rev_score < fwd_score) {
         rev_aln.ok = true;
         aln.ok = false;
+#ifdef WFLIGN_DEBUG
         std::cerr << "got better score with reverse complement alignment" << std::endl
               << " query_length " << query_length
               << " target_length " << target_length
@@ -308,6 +309,7 @@ void do_wfa_patch_alignment(
               << "query " << std::string(query + j, query_length)
               << " target " << std::string(target + i, target_length)
               << std::endl;
+#endif
     } else {
         rev_aln.ok = false;
     }