From a25f2cbc5e4b91ab03defd20d53d8513d04f33c4 Mon Sep 17 00:00:00 2001
From: Erik Garrison <erik.garrison@gmail.com>
Date: Tue, 3 Oct 2023 16:18:05 -0500
Subject: [PATCH] plane sweep using log block length times identity as score

---
 src/map/include/filter.hpp | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/src/map/include/filter.hpp b/src/map/include/filter.hpp
index aa8b9176..2d273d46 100644
--- a/src/map/include/filter.hpp
+++ b/src/map/include/filter.hpp
@@ -254,7 +254,7 @@ namespace skch
 
         Helper(MappingResultsVector_t &v) : vec(v) {}
 
-        double get_score(const int x) const {return vec[x].nucIdentity; }
+        double get_score(const int x) const {return vec[x].nucIdentity * log(vec[x].blockLength) ; }
 
         //Greater than comparison by score and begin position
         //used to define order in BST