Clarify help string for -n #206
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Clarifies the help string for
-nand-S. For a query sequence, the-nand-Sparameters are applied to each group of reference sequences independently.For example, if the reference sequences are
g1#ctg1,g1#ctg2, andg2#ctg1, and-n 2is specified, then each query will have at most two mappings tog1#ctg1andg1#ctg2in total and at most two mappings tog2#ctg1