fix checking for remote alignment file

wdecoster · Jul 29, 2024 · b5bed0e · b5bed0e
1 parent 53ad0b7
commit b5bed0e
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Showing 2 changed files with 2 additions and 2 deletions.
diff --git a/Cargo.toml b/Cargo.toml
@@ -1,6 +1,6 @@
 [package]
 name = "STRdust"
-version = "0.8.7"
+version = "0.8.8"
 edition = "2021"
 
 

diff --git a/src/utils.rs b/src/utils.rs
@@ -25,7 +25,7 @@ pub fn reader(filename: &str) -> Box<dyn BufRead> {
 }
 
 pub fn check_files_exist(args: &crate::Cli) {
-    if !Path::new(&args.bam).exists() {
+    if !Path::new(&args.bam).exists() && !args.bam.starts_with("s3") && !args.bam.starts_with("https://") {
         error!("Alignment file not found: {}", args.bam);
         std::process::exit(1);
     }