Skip to content

Automagically ✨ generate primers for Golden Gate cloning using the Mammalian Cloning Toolkit (MTK)

License

Notifications You must be signed in to change notification settings

weinerlab/mtk_primer_generator

Folders and files

NameName
Last commit message
Last commit date

Latest commit

 

History

16 Commits
 
 
 
 
 
 
 
 

Repository files navigation

mtk_primer_generator

Automagically ✨ generate primers for Golden Gate cloning using the Mammalian Cloning Toolkit (MTK)

This python script is run through the command line and prompts the user to input a DNA sequence for domestication, followed by the part type and a short prefix for the output ordering/upload forms. It then outputs a list of primers that can be used to domesticate the input sequence along with the expected product size(s). The primers may be slightly longer than ideal if there is homology between the adapter sequence at the beginning of the primer and the plasmid itself, so we recommend checking primer specificity and melting temperatures using an application like Benchling and adjusting primer length as necessary.

See the publication here for details about the MTK (https://pubs.acs.org/doi/10.1021/acssynbio.9b00322)

Having trouble? You can also use an online version here: (https://www.jasontown.dev/tools/mtk-primer-generator)

About

Automagically ✨ generate primers for Golden Gate cloning using the Mammalian Cloning Toolkit (MTK)

Topics

Resources

License

Stars

Watchers

Forks

Releases

No releases published

Packages

No packages published

Languages