diff --git a/Changes b/Changes index 9994b0ce0..f305c7339 100644 --- a/Changes +++ b/Changes @@ -1,7 +1,16 @@ LIST OF CHANGES --------------- - - add BWA MEM2 support to sequence_align function +release 57.5.0 + - add BWA MEM2 support to seq_alignment function + - bug fix: add -f to rm command removing intermediate files (to + avoid error when no intermediate files are present) + - allow selection of duplicate marking method (biobambam,samtools + or picard) in seq_alignment via product_release.yml + - detect flowcell type and set uses_patterned_flowcell attribute + to allow setting of optical duplicate region size + - add ability to select bwakit postalt processing (if reference has + alternate haplotypes) in seq_alignment via product_release.yml release 57.4.0 - change genotype qc check to cram input