From a028fe34c71579ff1fa64ce220b43f0057449355 Mon Sep 17 00:00:00 2001 From: Ruben Bautista G Date: Wed, 16 Jan 2019 17:29:13 +0000 Subject: [PATCH 1/2] First commit of MAPD analysis support in nog_tracking --- lib/npg_tracking/data/mapd.pm | 91 ++++++++ lib/npg_tracking/data/mapd/find.pm | 192 +++++++++++++++++ lib/npg_tracking/data/reference/list.pm | 17 ++ t/10-mapd-find.t | 70 +++++++ t/10-mapd.t | 14 ++ .../mapd/metadata_cache/samplesheet_27128.csv | 195 ++++++++++++++++++ 6 files changed, 579 insertions(+) create mode 100644 lib/npg_tracking/data/mapd.pm create mode 100644 lib/npg_tracking/data/mapd/find.pm create mode 100644 t/10-mapd-find.t create mode 100644 t/10-mapd.t create mode 100644 t/data/mapd/metadata_cache/samplesheet_27128.csv diff --git a/lib/npg_tracking/data/mapd.pm b/lib/npg_tracking/data/mapd.pm new file mode 100644 index 00000000..58da5163 --- /dev/null +++ b/lib/npg_tracking/data/mapd.pm @@ -0,0 +1,91 @@ +package npg_tracking::data::mapd; + +use Moose; + +our $VERSION = '0'; + +extends 'npg_tracking::data::reference'; + +has 'bin_size' => ( + isa => 'Num', + is => 'ro', + required => 0, +); + +has 'read_length' => ( + isa => 'Num', + is => 'ro', + required => 0, +); + +with 'npg_tracking::data::mapd::find'; + +__PACKAGE__->meta->make_immutable; + +no Moose; + +1; +__END__ + +=head1 NAME + +npg_tracking::data::mapd + +=head1 VERSION + +=head1 SYNOPSIS + +=head1 DESCRIPTION + +A wrapper class for finding the location of MAPD files. + +=head1 SUBROUTINES/METHODS + +=head2 id_run + +=head2 position + +=head2 tag_index + +=head2 rpt_list + +=head1 DIAGNOSTICS + +=head1 CONFIGURATION AND ENVIRONMENT + +=head1 DEPENDENCIES + +=over + +=item Moose + +=back + +=head1 INCOMPATIBILITIES + +=head1 BUGS AND LIMITATIONS + +=head1 AUTHOR + +Ruben Bautista Erb11@sanger.ac.ukE + +=head1 LICENSE AND COPYRIGHT + +Copyright (C) 2018 GRL + +This file is part of NPG. + +NPG is free software: you can redistribute it and/or modify +it under the terms of the GNU General Public License as published by +the Free Software Foundation, either version 3 of the License, or +(at your option) any later version. + +This program is distributed in the hope that it will be useful, +but WITHOUT ANY WARRANTY; without even the implied warranty of +MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +GNU General Public License for more details. + +You should have received a copy of the GNU General Public License +along with this program. If not, see . + +=cut diff --git a/lib/npg_tracking/data/mapd/find.pm b/lib/npg_tracking/data/mapd/find.pm new file mode 100644 index 00000000..d28fe535 --- /dev/null +++ b/lib/npg_tracking/data/mapd/find.pm @@ -0,0 +1,192 @@ +package npg_tracking::data::mapd::find; + +use Moose::Role; +use Carp; +use Readonly; +use File::Spec; +use npg_tracking::util::abs_path qw(abs_path); + +with qw/npg_tracking::data::reference::find/; + +requires qw/read_length bin_size/; + +our $VERSION = '0'; + +Readonly::Scalar my $MAPPABILITY_FILE => 'Combined_%s_%s_%s_%dbases_mappable_bins_GCperc_INPUT.txt'; +Readonly::Scalar my $MAPPABILITY_BED_FILE => 'Combined_%s_%s_%s_%dbases_mappable_bins.bed'; + +has 'mappablebins_path' => ( + isa => 'Maybe[Str]', + is => 'ro', + lazy_build => 1, +); + +has 'mappability_file' => ( + isa => 'Maybe[Str]', + is => 'ro', + lazy_build => 1, +); + +has 'mappability_bed_file' => ( + isa => 'Maybe[Str]', + is => 'ro', + lazy_build => 1, +); + +has 'chromosomes_path' => ( + isa => 'Maybe[Str]', + is => 'ro', + lazy_build => 1, +); + +has 'chromosomes_file' => ( + isa => 'Maybe[Str]', + is => 'ro', + lazy_build => 1, +); + +sub _build_mappablebins_path { + my $self = shift; + return $self->_find_path(q[MappableBINS]); +} + +sub _build_chromosomes_path { + my $self = shift; + return $self->_find_path(q[chromosomes]); +} + +sub _build_mappability_file { + my $self = shift; + return $self->_find_mappability_file(q[txt]); +} + +sub _build_mappability_bed_file { + my $self = shift; + return $self->_find_mappability_file(q[bed]); +} + +sub _build_chromosomes_file { + my $self = shift; + return $self->_find_file(q[chromosomes], q[txt]); +} + +sub _find_path { + my ($self, $dir_name) = @_; + my $path; + my ($organism, $strain) = $self->parse_reference_genome($self->lims->reference_genome); + if ($organism && $strain) { + $path = abs_path($self->custom_analysis_repository . "/mapd/$organism/$strain/$dir_name"); + } + return $path; +} + +sub _find_file { + my ($self, $subfolder, $file_type) = @_; + my $path = $self->_find_path($subfolder); + my @files; + if ($path) { + @files = glob $path . q[/*.] . $file_type; + } + if (scalar @files > 1) { + croak qq[More than one $file_type file in $path]; + } + if (scalar @files == 0) { + if ($subfolder && -d $subfolder) { + $self->messages->push(qq[Directory $subfolder exists, but no such *.$file_type file exist]); + } + return; + } + return $files[0]; +} + +sub _find_mappability_file { + my ($self, $file_type) = @_; + my @files; + my $mappablebins_path = $self->mappablebins_path; + if ($mappablebins_path) { + @files = glob $mappablebins_path . q[/*.] . $file_type; + } + if (scalar @files == 0) { + $self->messages->push(q[Directory ]. $mappablebins_path. + q[ exists, but no such *.]. $file_type. + q[ file(s) exist]); + return; + } + my $mappability_file; + if ($file_type eq q[bed]) { + $mappability_file = $MAPPABILITY_BED_FILE; + } elsif ($file_type eq q[txt]) { + $mappability_file = $MAPPABILITY_FILE; + } + my ($organism, $strain) = $self->parse_reference_genome($self->lims->reference_genome); + if ($organism && $strain) { + $mappability_file = sprintf $mappability_file, + $organism, $strain, $self->bin_size, $self->read_length; + $mappability_file = File::Spec->catfile($self->mappablebins_path, $mappability_file); + if (! -e $mappability_file) { + $self->messages->push(q[Mappability file ]. $mappability_file. + q[ not found in ]. $mappablebins_path); + return; + } + } + return $mappability_file; +} + +1; +__END__ + +=head1 NAME + +npg_tracking::data::mapd::find + +=head1 SYNOPSIS + + package MyPackage; + use Moose; + with qw{npg_tracking::data::mapd::find}; + + +=head1 DESCRIPTION + +A Moose role for finding the location of MAPD files. + +=head1 SUBROUTINES/METHODS + +=head1 DIAGNOSTICS + +=head1 CONFIGURATION AND ENVIRONMENT + +=head1 DEPENDENCIES + +=over + +=item Moose::Role + +=item Carp + +=back + +=head1 INCOMPATIBILITIES + +=head1 BUGS AND LIMITATIONS + +=head1 AUTHOR + +Ruben Bautista + +=head1 LICENSE AND COPYRIGHT + +Copyright (C) 2018 Genome Research Limited + +This program is free software: you can redistribute it and/or modify +it under the terms of the GNU General Public License as published by +the Free Software Foundation, either version 3 of the License, or +(at your option) any later version. + +This program is distributed in the hope that it will be useful, +but WITHOUT ANY WARRANTY; without even the implied warranty of +MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +GNU General Public License for more details. + +You should have received a copy of the GNU General Public License +along with this program. If not, see . diff --git a/lib/npg_tracking/data/reference/list.pm b/lib/npg_tracking/data/reference/list.pm index f93504c2..ae1625c5 100644 --- a/lib/npg_tracking/data/reference/list.pm +++ b/lib/npg_tracking/data/reference/list.pm @@ -51,6 +51,7 @@ Readonly::Scalar our $TAG_SETS_DIR => q[tag_sets]; Readonly::Scalar our $TAXON_IDS_DIR => q[taxon_ids]; Readonly::Scalar our $BIN_DIR => q[bin]; Readonly::Scalar our $ORG_NAME_DELIM => q[_]; +Readonly::Scalar our $CUSTOM_ANALYSIS_DIR=> q[custom_analysis]; Readonly::Scalar our $LAST => -1; Readonly::Scalar our $SECOND_FROM_END => -2; @@ -597,6 +598,22 @@ sub ref_file_prefix { croak qq[Reference file with .fa or .fasta or .fna extension not found in $fasta_dir]; } +=head2 custom_analysis repository + +An absolute path to the custom_analysis repository. + +=cut +has 'custom_analysis_repository' => (isa => 'NPG_TRACKING_REFERENCE_REPOSITORY', + is => 'ro', + required => 0, + lazy_build => 1, +); +sub _build_custom_analysis_repository { + my $self = shift; + return catdir($self->repository, $CUSTOM_ANALYSIS_DIR); +} + + no Moose::Role; 1; diff --git a/t/10-mapd-find.t b/t/10-mapd-find.t new file mode 100644 index 00000000..62125f43 --- /dev/null +++ b/t/10-mapd-find.t @@ -0,0 +1,70 @@ +use strict; +use warnings; +use Test::More tests => 2; +use Test::Exception; +use File::Basename; +use File::Copy; +use File::Find; +use File::Path qw(make_path); +use File::Spec::Functions qw(catfile catdir); +use File::Spec qw(splitpath); +use File::Temp qw(tempdir); + +my $tmp_repos = tempdir(CLEANUP => 1); +local $ENV{NPG_WEBSERVICE_CACHE_DIR} = $tmp_repos; + +my $ref_dir = catdir($tmp_repos,'custom_analysis','mapd','Homo_sapiens','1000Genomes_hs37d5'); +`mkdir -p $ref_dir/{MappableBINS,chromosomes}`; +`touch $ref_dir/MappableBINS/Combined_Homo_sapiens_1000Genomes_hs37d5_100000_151bases_mappable_bins_GCperc_INPUT.txt`; +`touch $ref_dir/MappableBINS/Combined_Homo_sapiens_1000Genomes_hs37d5_100000_151bases_mappable_bins.bed`; +`touch $ref_dir/MappableBINS/Combined_Homo_sapiens_1000Genomes_hs37d5_500000_151bases_mappable_bins_GCperc_INPUT.txt`; +`touch $ref_dir/MappableBINS/Combined_Homo_sapiens_1000Genomes_hs37d5_500000_151bases_mappable_bins.bed`; +`touch $ref_dir/chromosomes/chr_list.txt`; + +my $central = 't/data/mapd/'; + +use_ok('npg_tracking::data::mapd'); + +local $ENV{'NPG_CACHED_SAMPLESHEET_FILE'} = catfile($central, 'metadata_cache', 'samplesheet_27128.csv'); + +subtest 'find mapd files 1' => sub { + plan tests => 8; + + my $test = npg_tracking::data::mapd->new( + id_run => 27128, + position => 1, + tag_index => 1, + repository => $tmp_repos, + read_length => 151, + bin_size => 100000,); + + isa_ok($test, 'npg_tracking::data::mapd'); + + is($test->lims->reference_genome, 'Homo_sapiens (1000Genomes_hs37d5 + ensembl_75_transcriptome)', + 'reference genome ok'); + + like($test->custom_analysis_repository, qr/$tmp_repos\/custom_analysis/smx, + 'custom analysis repository path is correct'); + + my ($organism, $strain) = $test->parse_reference_genome($test->lims->reference_genome); + my $mappablebins_path = catdir($tmp_repos, 'custom_analysis', 'mapd', $organism, $strain, 'MappableBINS'); + my $chromosomes_path = catdir($tmp_repos, 'custom_analysis', 'mapd', $organism, $strain, 'chromosomes'); + + is($test->mappablebins_path, $mappablebins_path, + 'mappablebins path is correct'); + + is($test->chromosomes_path, $chromosomes_path, + 'chromosomes path is correct'); + + is(basename($test->mappability_file), 'Combined_Homo_sapiens_1000Genomes_hs37d5_100000_151bases_mappable_bins_GCperc_INPUT.txt', + 'finds mappability file'); + + is(basename($test->mappability_bed_file), 'Combined_Homo_sapiens_1000Genomes_hs37d5_100000_151bases_mappable_bins.bed', + 'finds mappability bed file'); + + is(basename($test->chromosomes_file), 'chr_list.txt', + 'finds chromosomes list file'); +}; + + +1; \ No newline at end of file diff --git a/t/10-mapd.t b/t/10-mapd.t new file mode 100644 index 00000000..ba5067d4 --- /dev/null +++ b/t/10-mapd.t @@ -0,0 +1,14 @@ +use strict; +use warnings; +use Test::More tests => 1; +use Test::Exception; +use File::Spec::Functions qw(splitpath catfile); +use Cwd qw(cwd); +use File::Path qw(make_path); +use File::Copy; +use File::Temp qw(tempdir); +use File::Find; + +use_ok('npg_tracking::data::mapd'); + +1; \ No newline at end of file diff --git a/t/data/mapd/metadata_cache/samplesheet_27128.csv b/t/data/mapd/metadata_cache/samplesheet_27128.csv new file mode 100644 index 00000000..d9435c21 --- /dev/null +++ b/t/data/mapd/metadata_cache/samplesheet_27128.csv @@ -0,0 +1,195 @@ +[Data],,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +Lane,Sample_ID,Sample_Name,GenomeFolder,Index,bait_name,default_library_type,default_tag_sequence,default_tagtwo_sequence,email_addresses,email_addresses_of_followers,email_addresses_of_managers,email_addresses_of_owners,gbs_plex_name,is_control,is_pool,lane_id,lane_priority,library_name,organism,organism_taxon_id,project_cost_code,project_id,project_name,purpose,qc_state,request_id,required_insert_size_range,sample_accession_number,sample_cohort,sample_common_name,sample_consent_withdrawn,sample_description,sample_donor_id,sample_id,sample_name,sample_public_name,sample_reference_genome,sample_supplier_name,spiked_phix_tag_index,study_accession_number,study_alignments_in_bam,study_contains_nonconsented_human,study_contains_nonconsented_xahuman,study_description,study_id,study_name,study_reference_genome,study_separate_y_chromosome_data,study_title,tag_index, +1,22963382,4884STDY7663260,,ATCACGTT,,Standard,ATCACGTT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362288,3,22963382,,,S1729,,,standard,,,from:450 to:450,,,,0,,4884STDY7663260,3882670,4884STDY7663260,,,SCGC_2649_B01,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,1, +1,22963394,4884STDY7663261,,CGATGTTT,,Standard,CGATGTTT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362288,3,22963394,,,S1729,,,standard,,,from:450 to:450,,,,0,,4884STDY7663261,3882671,4884STDY7663261,,,SCGC_2648_B03,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,2, +1,22963406,4884STDY7663262,,TTAGGCAT,,Standard,TTAGGCAT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362288,3,22963406,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_2648_B06,4884STDY7663262,3882672,4884STDY7663262,,,SCGC_2648_B06,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,3, +1,22963418,4884STDY7663263,,TGACCACT,,Standard,TGACCACT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362288,3,22963418,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_2648_D12,4884STDY7663263,3882673,4884STDY7663263,,,SCGC_2648_D12,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,4, +1,22963430,4884STDY7663264,,ACAGTGGT,,Standard,ACAGTGGT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362288,3,22963430,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_2649_E01,4884STDY7663264,3882674,4884STDY7663264,,,SCGC_2649_E01,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,5, +1,22963442,4884STDY7663265,,GCCAATGT,,Standard,GCCAATGT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362288,3,22963442,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_2648_E09,4884STDY7663265,3882675,4884STDY7663265,,,SCGC_2648_E09,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,6, +1,22963454,4884STDY7663266,,CAGATCTG,,Standard,CAGATCTG,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362288,3,22963454,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_2649_F02,4884STDY7663266,3882676,4884STDY7663266,,,SCGC_2649_F02,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,7, +1,22963466,4884STDY7663267,,ACTTGATG,,Standard,ACTTGATG,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362288,3,22963466,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_2648_F12,4884STDY7663267,3882677,4884STDY7663267,,,SCGC_2648_F12,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,8, +1,22963383,4884STDY7663268,,GATCAGCG,,Standard,GATCAGCG,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362288,3,22963383,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_2648_G09,4884STDY7663268,3882678,4884STDY7663268,,,SCGC_2648_G09,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,9, +1,22963395,4884STDY7663269,,TAGCTTGT,,Standard,TAGCTTGT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362288,3,22963395,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_2649_H06,4884STDY7663269,3882679,4884STDY7663269,,,SCGC_2649_H06,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,10, +1,22963407,4884STDY7663270,,GGCTACAG,,Standard,GGCTACAG,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362288,3,22963407,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3264_A01,4884STDY7663270,3882680,4884STDY7663270,,,SCGC_3264_A01,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,11, +1,22963419,4884STDY7663271,,CTTGTACT,,Standard,CTTGTACT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362288,3,22963419,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3265_A09,4884STDY7663271,3882681,4884STDY7663271,,,SCGC_3265_A09,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,12, +1,22963431,4884STDY7663272,,TGGTTGTT,,Standard,TGGTTGTT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362288,3,22963431,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3264_E04,4884STDY7663272,3882682,4884STDY7663272,,,SCGC_3264_E04,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,13, +1,22963443,4884STDY7663273,,TCTCGGTT,,Standard,TCTCGGTT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362288,3,22963443,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3264_E08,4884STDY7663273,3882683,4884STDY7663273,,,SCGC_3264_E08,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,14, +1,22963455,4884STDY7663274,,TAAGCGTT,,Standard,TAAGCGTT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362288,3,22963455,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3264_E12,4884STDY7663274,3882684,4884STDY7663274,,,SCGC_3264_E12,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,15, +1,22963467,4884STDY7663275,,TCCGTCTT,,Standard,TCCGTCTT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362288,3,22963467,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_2649_G09,4884STDY7663275,3882685,4884STDY7663275,,,SCGC_2649_G09,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,16, +1,22963384,4884STDY7663276,,TGTACCTT,,Standard,TGTACCTT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362288,3,22963384,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3265_E04,4884STDY7663276,3882686,4884STDY7663276,,,SCGC_3265_E04,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,17, +1,22963396,4884STDY7663277,,TTCTGTGT,,Standard,TTCTGTGT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362288,3,22963396,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3265_F07,4884STDY7663277,3882687,4884STDY7663277,,,SCGC_3265_F07,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,18, +1,22963408,4884STDY7663278,,TCTGCTGT,,Standard,TCTGCTGT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362288,3,22963408,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3266_B09,4884STDY7663278,3882688,4884STDY7663278,,,SCGC_3266_B09,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,19, +1,22963420,4884STDY7663279,,TTGGAGGT,,Standard,TTGGAGGT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362288,3,22963420,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3266_C06,4884STDY7663279,3882689,4884STDY7663279,,,SCGC_3266_C06,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,20, +1,22963432,4884STDY7663280,,TCGAGCGT,,Standard,TCGAGCGT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362288,3,22963432,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3266_C08,4884STDY7663280,3882690,4884STDY7663280,,,SCGC_3266_C08,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,21, +1,22963444,4884STDY7663281,,TGATACGT,,Standard,TGATACGT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362288,3,22963444,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3266_D09,4884STDY7663281,3882691,4884STDY7663281,,,SCGC_3266_D09,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,22, +1,22963456,4884STDY7663282,,TGCATAGT,,Standard,TGCATAGT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362288,3,22963456,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3784_D11,4884STDY7663282,3882692,4884STDY7663282,,,SCGC_3784_D11,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,23, +1,22963468,4884STDY7663283,,TTGACTCT,,Standard,TTGACTCT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362288,3,22963468,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3266_E05,4884STDY7663283,3882693,4884STDY7663283,,,SCGC_3266_E05,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,24, +1,22963385,4884STDY7663284,,TGCGATCT,,Standard,TGCGATCT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362288,3,22963385,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3784_E06,4884STDY7663284,3882694,4884STDY7663284,,,SCGC_3784_E06,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,25, +1,22963397,4884STDY7663285,,TTCCTGCT,,Standard,TTCCTGCT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362288,3,22963397,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3784_F04,4884STDY7663285,3882695,4884STDY7663285,,,SCGC_3784_F04,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,26, +1,22963409,4884STDY7663286,,TAGTGACT,,Standard,TAGTGACT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362288,3,22963409,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3784_G02,4884STDY7663286,3882696,4884STDY7663286,,,SCGC_3784_G02,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,27, +1,22963421,4884STDY7663287,,TACAGGAT,,Standard,TACAGGAT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362288,3,22963421,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3784_G03,4884STDY7663287,3882697,4884STDY7663287,,,SCGC_3784_G03,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,28, +1,22963433,4884STDY7663288,,TCCTCAAT,,Standard,TCCTCAAT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362288,3,22963433,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3266_H03,4884STDY7663288,3882698,4884STDY7663288,,,SCGC_3266_H03,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,29, +1,22766063,phiX_for_spiked_buffers,,ACAACGCAATC,,,ACAACGCAATC,,,,,,,1,0,23362288,3,22766063,,10847,,,,standard,,,,,,,0,,,1255141,phiX_for_spiked_buffers,,PhiX (Sanger-SNPs),,888,,1,0,0,None,198,Illumina Controls, ,0,,888, +2,22963382,4884STDY7663260,,ATCACGTT,,Standard,ATCACGTT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362289,3,22963382,,,S1729,,,standard,,,from:450 to:450,,,,0,,4884STDY7663260,3882670,4884STDY7663260,,,SCGC_2649_B01,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,1, +2,22963394,4884STDY7663261,,CGATGTTT,,Standard,CGATGTTT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362289,3,22963394,,,S1729,,,standard,,,from:450 to:450,,,,0,,4884STDY7663261,3882671,4884STDY7663261,,,SCGC_2648_B03,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,2, +2,22963406,4884STDY7663262,,TTAGGCAT,,Standard,TTAGGCAT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362289,3,22963406,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_2648_B06,4884STDY7663262,3882672,4884STDY7663262,,,SCGC_2648_B06,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,3, +2,22963418,4884STDY7663263,,TGACCACT,,Standard,TGACCACT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362289,3,22963418,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_2648_D12,4884STDY7663263,3882673,4884STDY7663263,,,SCGC_2648_D12,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,4, +2,22963430,4884STDY7663264,,ACAGTGGT,,Standard,ACAGTGGT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362289,3,22963430,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_2649_E01,4884STDY7663264,3882674,4884STDY7663264,,,SCGC_2649_E01,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,5, +2,22963442,4884STDY7663265,,GCCAATGT,,Standard,GCCAATGT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362289,3,22963442,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_2648_E09,4884STDY7663265,3882675,4884STDY7663265,,,SCGC_2648_E09,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,6, +2,22963454,4884STDY7663266,,CAGATCTG,,Standard,CAGATCTG,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362289,3,22963454,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_2649_F02,4884STDY7663266,3882676,4884STDY7663266,,,SCGC_2649_F02,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,7, +2,22963466,4884STDY7663267,,ACTTGATG,,Standard,ACTTGATG,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362289,3,22963466,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_2648_F12,4884STDY7663267,3882677,4884STDY7663267,,,SCGC_2648_F12,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,8, +2,22963383,4884STDY7663268,,GATCAGCG,,Standard,GATCAGCG,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362289,3,22963383,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_2648_G09,4884STDY7663268,3882678,4884STDY7663268,,,SCGC_2648_G09,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,9, +2,22963395,4884STDY7663269,,TAGCTTGT,,Standard,TAGCTTGT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362289,3,22963395,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_2649_H06,4884STDY7663269,3882679,4884STDY7663269,,,SCGC_2649_H06,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,10, +2,22963407,4884STDY7663270,,GGCTACAG,,Standard,GGCTACAG,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362289,3,22963407,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3264_A01,4884STDY7663270,3882680,4884STDY7663270,,,SCGC_3264_A01,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,11, +2,22963419,4884STDY7663271,,CTTGTACT,,Standard,CTTGTACT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362289,3,22963419,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3265_A09,4884STDY7663271,3882681,4884STDY7663271,,,SCGC_3265_A09,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,12, +2,22963431,4884STDY7663272,,TGGTTGTT,,Standard,TGGTTGTT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362289,3,22963431,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3264_E04,4884STDY7663272,3882682,4884STDY7663272,,,SCGC_3264_E04,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,13, +2,22963443,4884STDY7663273,,TCTCGGTT,,Standard,TCTCGGTT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362289,3,22963443,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3264_E08,4884STDY7663273,3882683,4884STDY7663273,,,SCGC_3264_E08,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,14, +2,22963455,4884STDY7663274,,TAAGCGTT,,Standard,TAAGCGTT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362289,3,22963455,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3264_E12,4884STDY7663274,3882684,4884STDY7663274,,,SCGC_3264_E12,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,15, +2,22963467,4884STDY7663275,,TCCGTCTT,,Standard,TCCGTCTT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362289,3,22963467,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_2649_G09,4884STDY7663275,3882685,4884STDY7663275,,,SCGC_2649_G09,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,16, +2,22963384,4884STDY7663276,,TGTACCTT,,Standard,TGTACCTT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362289,3,22963384,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3265_E04,4884STDY7663276,3882686,4884STDY7663276,,,SCGC_3265_E04,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,17, +2,22963396,4884STDY7663277,,TTCTGTGT,,Standard,TTCTGTGT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362289,3,22963396,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3265_F07,4884STDY7663277,3882687,4884STDY7663277,,,SCGC_3265_F07,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,18, +2,22963408,4884STDY7663278,,TCTGCTGT,,Standard,TCTGCTGT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362289,3,22963408,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3266_B09,4884STDY7663278,3882688,4884STDY7663278,,,SCGC_3266_B09,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,19, +2,22963420,4884STDY7663279,,TTGGAGGT,,Standard,TTGGAGGT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362289,3,22963420,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3266_C06,4884STDY7663279,3882689,4884STDY7663279,,,SCGC_3266_C06,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,20, +2,22963432,4884STDY7663280,,TCGAGCGT,,Standard,TCGAGCGT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362289,3,22963432,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3266_C08,4884STDY7663280,3882690,4884STDY7663280,,,SCGC_3266_C08,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,21, +2,22963444,4884STDY7663281,,TGATACGT,,Standard,TGATACGT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362289,3,22963444,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3266_D09,4884STDY7663281,3882691,4884STDY7663281,,,SCGC_3266_D09,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,22, +2,22963456,4884STDY7663282,,TGCATAGT,,Standard,TGCATAGT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362289,3,22963456,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3784_D11,4884STDY7663282,3882692,4884STDY7663282,,,SCGC_3784_D11,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,23, +2,22963468,4884STDY7663283,,TTGACTCT,,Standard,TTGACTCT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362289,3,22963468,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3266_E05,4884STDY7663283,3882693,4884STDY7663283,,,SCGC_3266_E05,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,24, +2,22963385,4884STDY7663284,,TGCGATCT,,Standard,TGCGATCT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362289,3,22963385,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3784_E06,4884STDY7663284,3882694,4884STDY7663284,,,SCGC_3784_E06,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,25, +2,22963397,4884STDY7663285,,TTCCTGCT,,Standard,TTCCTGCT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362289,3,22963397,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3784_F04,4884STDY7663285,3882695,4884STDY7663285,,,SCGC_3784_F04,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,26, +2,22963409,4884STDY7663286,,TAGTGACT,,Standard,TAGTGACT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362289,3,22963409,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3784_G02,4884STDY7663286,3882696,4884STDY7663286,,,SCGC_3784_G02,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,27, +2,22963421,4884STDY7663287,,TACAGGAT,,Standard,TACAGGAT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362289,3,22963421,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3784_G03,4884STDY7663287,3882697,4884STDY7663287,,,SCGC_3784_G03,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,28, +2,22963433,4884STDY7663288,,TCCTCAAT,,Standard,TCCTCAAT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362289,3,22963433,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3266_H03,4884STDY7663288,3882698,4884STDY7663288,,,SCGC_3266_H03,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,29, +2,22766063,phiX_for_spiked_buffers,,ACAACGCAATC,,,ACAACGCAATC,,,,,,,1,0,23362289,3,22766063,,10847,,,,standard,,,,,,,0,,,1255141,phiX_for_spiked_buffers,,PhiX (Sanger-SNPs),,888,,1,0,0,None,198,Illumina Controls, ,0,,888, +3,22963382,4884STDY7663260,,ATCACGTT,,Standard,ATCACGTT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362290,3,22963382,,,S1729,,,standard,,,from:450 to:450,,,,0,,4884STDY7663260,3882670,4884STDY7663260,,,SCGC_2649_B01,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,1, +3,22963394,4884STDY7663261,,CGATGTTT,,Standard,CGATGTTT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362290,3,22963394,,,S1729,,,standard,,,from:450 to:450,,,,0,,4884STDY7663261,3882671,4884STDY7663261,,,SCGC_2648_B03,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,2, +3,22963406,4884STDY7663262,,TTAGGCAT,,Standard,TTAGGCAT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362290,3,22963406,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_2648_B06,4884STDY7663262,3882672,4884STDY7663262,,,SCGC_2648_B06,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,3, +3,22963418,4884STDY7663263,,TGACCACT,,Standard,TGACCACT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362290,3,22963418,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_2648_D12,4884STDY7663263,3882673,4884STDY7663263,,,SCGC_2648_D12,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,4, +3,22963430,4884STDY7663264,,ACAGTGGT,,Standard,ACAGTGGT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362290,3,22963430,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_2649_E01,4884STDY7663264,3882674,4884STDY7663264,,,SCGC_2649_E01,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,5, +3,22963442,4884STDY7663265,,GCCAATGT,,Standard,GCCAATGT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362290,3,22963442,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_2648_E09,4884STDY7663265,3882675,4884STDY7663265,,,SCGC_2648_E09,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,6, +3,22963454,4884STDY7663266,,CAGATCTG,,Standard,CAGATCTG,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362290,3,22963454,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_2649_F02,4884STDY7663266,3882676,4884STDY7663266,,,SCGC_2649_F02,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,7, +3,22963466,4884STDY7663267,,ACTTGATG,,Standard,ACTTGATG,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362290,3,22963466,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_2648_F12,4884STDY7663267,3882677,4884STDY7663267,,,SCGC_2648_F12,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,8, +3,22963383,4884STDY7663268,,GATCAGCG,,Standard,GATCAGCG,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362290,3,22963383,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_2648_G09,4884STDY7663268,3882678,4884STDY7663268,,,SCGC_2648_G09,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,9, +3,22963395,4884STDY7663269,,TAGCTTGT,,Standard,TAGCTTGT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362290,3,22963395,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_2649_H06,4884STDY7663269,3882679,4884STDY7663269,,,SCGC_2649_H06,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,10, +3,22963407,4884STDY7663270,,GGCTACAG,,Standard,GGCTACAG,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362290,3,22963407,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3264_A01,4884STDY7663270,3882680,4884STDY7663270,,,SCGC_3264_A01,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,11, +3,22963419,4884STDY7663271,,CTTGTACT,,Standard,CTTGTACT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362290,3,22963419,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3265_A09,4884STDY7663271,3882681,4884STDY7663271,,,SCGC_3265_A09,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,12, +3,22963431,4884STDY7663272,,TGGTTGTT,,Standard,TGGTTGTT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362290,3,22963431,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3264_E04,4884STDY7663272,3882682,4884STDY7663272,,,SCGC_3264_E04,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,13, +3,22963443,4884STDY7663273,,TCTCGGTT,,Standard,TCTCGGTT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362290,3,22963443,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3264_E08,4884STDY7663273,3882683,4884STDY7663273,,,SCGC_3264_E08,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,14, +3,22963455,4884STDY7663274,,TAAGCGTT,,Standard,TAAGCGTT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362290,3,22963455,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3264_E12,4884STDY7663274,3882684,4884STDY7663274,,,SCGC_3264_E12,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,15, +3,22963467,4884STDY7663275,,TCCGTCTT,,Standard,TCCGTCTT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362290,3,22963467,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_2649_G09,4884STDY7663275,3882685,4884STDY7663275,,,SCGC_2649_G09,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,16, +3,22963384,4884STDY7663276,,TGTACCTT,,Standard,TGTACCTT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362290,3,22963384,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3265_E04,4884STDY7663276,3882686,4884STDY7663276,,,SCGC_3265_E04,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,17, +3,22963396,4884STDY7663277,,TTCTGTGT,,Standard,TTCTGTGT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362290,3,22963396,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3265_F07,4884STDY7663277,3882687,4884STDY7663277,,,SCGC_3265_F07,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,18, +3,22963408,4884STDY7663278,,TCTGCTGT,,Standard,TCTGCTGT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362290,3,22963408,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3266_B09,4884STDY7663278,3882688,4884STDY7663278,,,SCGC_3266_B09,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,19, +3,22963420,4884STDY7663279,,TTGGAGGT,,Standard,TTGGAGGT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362290,3,22963420,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3266_C06,4884STDY7663279,3882689,4884STDY7663279,,,SCGC_3266_C06,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,20, +3,22963432,4884STDY7663280,,TCGAGCGT,,Standard,TCGAGCGT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362290,3,22963432,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3266_C08,4884STDY7663280,3882690,4884STDY7663280,,,SCGC_3266_C08,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,21, +3,22963444,4884STDY7663281,,TGATACGT,,Standard,TGATACGT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362290,3,22963444,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3266_D09,4884STDY7663281,3882691,4884STDY7663281,,,SCGC_3266_D09,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,22, +3,22963456,4884STDY7663282,,TGCATAGT,,Standard,TGCATAGT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362290,3,22963456,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3784_D11,4884STDY7663282,3882692,4884STDY7663282,,,SCGC_3784_D11,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,23, +3,22963468,4884STDY7663283,,TTGACTCT,,Standard,TTGACTCT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362290,3,22963468,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3266_E05,4884STDY7663283,3882693,4884STDY7663283,,,SCGC_3266_E05,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,24, +3,22963385,4884STDY7663284,,TGCGATCT,,Standard,TGCGATCT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362290,3,22963385,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3784_E06,4884STDY7663284,3882694,4884STDY7663284,,,SCGC_3784_E06,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,25, +3,22963397,4884STDY7663285,,TTCCTGCT,,Standard,TTCCTGCT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362290,3,22963397,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3784_F04,4884STDY7663285,3882695,4884STDY7663285,,,SCGC_3784_F04,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,26, +3,22963409,4884STDY7663286,,TAGTGACT,,Standard,TAGTGACT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362290,3,22963409,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3784_G02,4884STDY7663286,3882696,4884STDY7663286,,,SCGC_3784_G02,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,27, +3,22963421,4884STDY7663287,,TACAGGAT,,Standard,TACAGGAT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362290,3,22963421,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3784_G03,4884STDY7663287,3882697,4884STDY7663287,,,SCGC_3784_G03,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,28, +3,22963433,4884STDY7663288,,TCCTCAAT,,Standard,TCCTCAAT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362290,3,22963433,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3266_H03,4884STDY7663288,3882698,4884STDY7663288,,,SCGC_3266_H03,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,29, +3,22766063,phiX_for_spiked_buffers,,ACAACGCAATC,,,ACAACGCAATC,,,,,,,1,0,23362290,3,22766063,,10847,,,,standard,,,,,,,0,,,1255141,phiX_for_spiked_buffers,,PhiX (Sanger-SNPs),,888,,1,0,0,None,198,Illumina Controls, ,0,,888, +4,22963382,4884STDY7663260,,ATCACGTT,,Standard,ATCACGTT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362291,3,22963382,,,S1729,,,standard,,,from:450 to:450,,,,0,,4884STDY7663260,3882670,4884STDY7663260,,,SCGC_2649_B01,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,1, +4,22963394,4884STDY7663261,,CGATGTTT,,Standard,CGATGTTT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362291,3,22963394,,,S1729,,,standard,,,from:450 to:450,,,,0,,4884STDY7663261,3882671,4884STDY7663261,,,SCGC_2648_B03,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,2, +4,22963406,4884STDY7663262,,TTAGGCAT,,Standard,TTAGGCAT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362291,3,22963406,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_2648_B06,4884STDY7663262,3882672,4884STDY7663262,,,SCGC_2648_B06,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,3, +4,22963418,4884STDY7663263,,TGACCACT,,Standard,TGACCACT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362291,3,22963418,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_2648_D12,4884STDY7663263,3882673,4884STDY7663263,,,SCGC_2648_D12,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,4, +4,22963430,4884STDY7663264,,ACAGTGGT,,Standard,ACAGTGGT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362291,3,22963430,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_2649_E01,4884STDY7663264,3882674,4884STDY7663264,,,SCGC_2649_E01,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,5, +4,22963442,4884STDY7663265,,GCCAATGT,,Standard,GCCAATGT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362291,3,22963442,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_2648_E09,4884STDY7663265,3882675,4884STDY7663265,,,SCGC_2648_E09,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,6, +4,22963454,4884STDY7663266,,CAGATCTG,,Standard,CAGATCTG,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362291,3,22963454,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_2649_F02,4884STDY7663266,3882676,4884STDY7663266,,,SCGC_2649_F02,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,7, +4,22963466,4884STDY7663267,,ACTTGATG,,Standard,ACTTGATG,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362291,3,22963466,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_2648_F12,4884STDY7663267,3882677,4884STDY7663267,,,SCGC_2648_F12,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,8, +4,22963383,4884STDY7663268,,GATCAGCG,,Standard,GATCAGCG,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362291,3,22963383,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_2648_G09,4884STDY7663268,3882678,4884STDY7663268,,,SCGC_2648_G09,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,9, +4,22963395,4884STDY7663269,,TAGCTTGT,,Standard,TAGCTTGT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362291,3,22963395,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_2649_H06,4884STDY7663269,3882679,4884STDY7663269,,,SCGC_2649_H06,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,10, +4,22963407,4884STDY7663270,,GGCTACAG,,Standard,GGCTACAG,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362291,3,22963407,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3264_A01,4884STDY7663270,3882680,4884STDY7663270,,,SCGC_3264_A01,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,11, +4,22963419,4884STDY7663271,,CTTGTACT,,Standard,CTTGTACT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362291,3,22963419,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3265_A09,4884STDY7663271,3882681,4884STDY7663271,,,SCGC_3265_A09,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,12, +4,22963431,4884STDY7663272,,TGGTTGTT,,Standard,TGGTTGTT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362291,3,22963431,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3264_E04,4884STDY7663272,3882682,4884STDY7663272,,,SCGC_3264_E04,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,13, +4,22963443,4884STDY7663273,,TCTCGGTT,,Standard,TCTCGGTT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362291,3,22963443,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3264_E08,4884STDY7663273,3882683,4884STDY7663273,,,SCGC_3264_E08,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,14, +4,22963455,4884STDY7663274,,TAAGCGTT,,Standard,TAAGCGTT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362291,3,22963455,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3264_E12,4884STDY7663274,3882684,4884STDY7663274,,,SCGC_3264_E12,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,15, +4,22963467,4884STDY7663275,,TCCGTCTT,,Standard,TCCGTCTT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362291,3,22963467,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_2649_G09,4884STDY7663275,3882685,4884STDY7663275,,,SCGC_2649_G09,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,16, +4,22963384,4884STDY7663276,,TGTACCTT,,Standard,TGTACCTT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362291,3,22963384,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3265_E04,4884STDY7663276,3882686,4884STDY7663276,,,SCGC_3265_E04,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,17, +4,22963396,4884STDY7663277,,TTCTGTGT,,Standard,TTCTGTGT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362291,3,22963396,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3265_F07,4884STDY7663277,3882687,4884STDY7663277,,,SCGC_3265_F07,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,18, +4,22963408,4884STDY7663278,,TCTGCTGT,,Standard,TCTGCTGT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362291,3,22963408,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3266_B09,4884STDY7663278,3882688,4884STDY7663278,,,SCGC_3266_B09,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,19, +4,22963420,4884STDY7663279,,TTGGAGGT,,Standard,TTGGAGGT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362291,3,22963420,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3266_C06,4884STDY7663279,3882689,4884STDY7663279,,,SCGC_3266_C06,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,20, +4,22963432,4884STDY7663280,,TCGAGCGT,,Standard,TCGAGCGT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362291,3,22963432,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3266_C08,4884STDY7663280,3882690,4884STDY7663280,,,SCGC_3266_C08,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,21, +4,22963444,4884STDY7663281,,TGATACGT,,Standard,TGATACGT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362291,3,22963444,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3266_D09,4884STDY7663281,3882691,4884STDY7663281,,,SCGC_3266_D09,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,22, +4,22963456,4884STDY7663282,,TGCATAGT,,Standard,TGCATAGT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362291,3,22963456,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3784_D11,4884STDY7663282,3882692,4884STDY7663282,,,SCGC_3784_D11,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,23, +4,22963468,4884STDY7663283,,TTGACTCT,,Standard,TTGACTCT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362291,3,22963468,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3266_E05,4884STDY7663283,3882693,4884STDY7663283,,,SCGC_3266_E05,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,24, +4,22963385,4884STDY7663284,,TGCGATCT,,Standard,TGCGATCT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362291,3,22963385,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3784_E06,4884STDY7663284,3882694,4884STDY7663284,,,SCGC_3784_E06,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,25, +4,22963397,4884STDY7663285,,TTCCTGCT,,Standard,TTCCTGCT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362291,3,22963397,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3784_F04,4884STDY7663285,3882695,4884STDY7663285,,,SCGC_3784_F04,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,26, +4,22963409,4884STDY7663286,,TAGTGACT,,Standard,TAGTGACT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362291,3,22963409,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3784_G02,4884STDY7663286,3882696,4884STDY7663286,,,SCGC_3784_G02,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,27, +4,22963421,4884STDY7663287,,TACAGGAT,,Standard,TACAGGAT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362291,3,22963421,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3784_G03,4884STDY7663287,3882697,4884STDY7663287,,,SCGC_3784_G03,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,28, +4,22963433,4884STDY7663288,,TCCTCAAT,,Standard,TCCTCAAT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362291,3,22963433,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3266_H03,4884STDY7663288,3882698,4884STDY7663288,,,SCGC_3266_H03,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,29, +4,22766063,phiX_for_spiked_buffers,,ACAACGCAATC,,,ACAACGCAATC,,,,,,,1,0,23362291,3,22766063,,10847,,,,standard,,,,,,,0,,,1255141,phiX_for_spiked_buffers,,PhiX (Sanger-SNPs),,888,,1,0,0,None,198,Illumina Controls, ,0,,888, +5,22963382,4884STDY7663260,,ATCACGTT,,Standard,ATCACGTT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362292,3,22963382,,,S1729,,,standard,,,from:450 to:450,,,,0,,4884STDY7663260,3882670,4884STDY7663260,,,SCGC_2649_B01,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,1, +5,22963394,4884STDY7663261,,CGATGTTT,,Standard,CGATGTTT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362292,3,22963394,,,S1729,,,standard,,,from:450 to:450,,,,0,,4884STDY7663261,3882671,4884STDY7663261,,,SCGC_2648_B03,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,2, +5,22963406,4884STDY7663262,,TTAGGCAT,,Standard,TTAGGCAT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362292,3,22963406,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_2648_B06,4884STDY7663262,3882672,4884STDY7663262,,,SCGC_2648_B06,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,3, +5,22963418,4884STDY7663263,,TGACCACT,,Standard,TGACCACT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362292,3,22963418,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_2648_D12,4884STDY7663263,3882673,4884STDY7663263,,,SCGC_2648_D12,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,4, +5,22963430,4884STDY7663264,,ACAGTGGT,,Standard,ACAGTGGT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362292,3,22963430,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_2649_E01,4884STDY7663264,3882674,4884STDY7663264,,,SCGC_2649_E01,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,5, +5,22963442,4884STDY7663265,,GCCAATGT,,Standard,GCCAATGT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362292,3,22963442,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_2648_E09,4884STDY7663265,3882675,4884STDY7663265,,,SCGC_2648_E09,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,6, +5,22963454,4884STDY7663266,,CAGATCTG,,Standard,CAGATCTG,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362292,3,22963454,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_2649_F02,4884STDY7663266,3882676,4884STDY7663266,,,SCGC_2649_F02,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,7, +5,22963466,4884STDY7663267,,ACTTGATG,,Standard,ACTTGATG,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362292,3,22963466,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_2648_F12,4884STDY7663267,3882677,4884STDY7663267,,,SCGC_2648_F12,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,8, +5,22963383,4884STDY7663268,,GATCAGCG,,Standard,GATCAGCG,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362292,3,22963383,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_2648_G09,4884STDY7663268,3882678,4884STDY7663268,,,SCGC_2648_G09,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,9, +5,22963395,4884STDY7663269,,TAGCTTGT,,Standard,TAGCTTGT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362292,3,22963395,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_2649_H06,4884STDY7663269,3882679,4884STDY7663269,,,SCGC_2649_H06,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,10, +5,22963407,4884STDY7663270,,GGCTACAG,,Standard,GGCTACAG,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362292,3,22963407,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3264_A01,4884STDY7663270,3882680,4884STDY7663270,,,SCGC_3264_A01,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,11, +5,22963419,4884STDY7663271,,CTTGTACT,,Standard,CTTGTACT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362292,3,22963419,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3265_A09,4884STDY7663271,3882681,4884STDY7663271,,,SCGC_3265_A09,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,12, +5,22963431,4884STDY7663272,,TGGTTGTT,,Standard,TGGTTGTT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362292,3,22963431,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3264_E04,4884STDY7663272,3882682,4884STDY7663272,,,SCGC_3264_E04,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,13, +5,22963443,4884STDY7663273,,TCTCGGTT,,Standard,TCTCGGTT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362292,3,22963443,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3264_E08,4884STDY7663273,3882683,4884STDY7663273,,,SCGC_3264_E08,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,14, +5,22963455,4884STDY7663274,,TAAGCGTT,,Standard,TAAGCGTT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362292,3,22963455,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3264_E12,4884STDY7663274,3882684,4884STDY7663274,,,SCGC_3264_E12,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,15, +5,22963467,4884STDY7663275,,TCCGTCTT,,Standard,TCCGTCTT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362292,3,22963467,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_2649_G09,4884STDY7663275,3882685,4884STDY7663275,,,SCGC_2649_G09,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,16, +5,22963384,4884STDY7663276,,TGTACCTT,,Standard,TGTACCTT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362292,3,22963384,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3265_E04,4884STDY7663276,3882686,4884STDY7663276,,,SCGC_3265_E04,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,17, +5,22963396,4884STDY7663277,,TTCTGTGT,,Standard,TTCTGTGT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362292,3,22963396,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3265_F07,4884STDY7663277,3882687,4884STDY7663277,,,SCGC_3265_F07,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,18, +5,22963408,4884STDY7663278,,TCTGCTGT,,Standard,TCTGCTGT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362292,3,22963408,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3266_B09,4884STDY7663278,3882688,4884STDY7663278,,,SCGC_3266_B09,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,19, +5,22963420,4884STDY7663279,,TTGGAGGT,,Standard,TTGGAGGT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362292,3,22963420,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3266_C06,4884STDY7663279,3882689,4884STDY7663279,,,SCGC_3266_C06,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,20, +5,22963432,4884STDY7663280,,TCGAGCGT,,Standard,TCGAGCGT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362292,3,22963432,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3266_C08,4884STDY7663280,3882690,4884STDY7663280,,,SCGC_3266_C08,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,21, +5,22963444,4884STDY7663281,,TGATACGT,,Standard,TGATACGT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362292,3,22963444,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3266_D09,4884STDY7663281,3882691,4884STDY7663281,,,SCGC_3266_D09,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,22, +5,22963456,4884STDY7663282,,TGCATAGT,,Standard,TGCATAGT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362292,3,22963456,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3784_D11,4884STDY7663282,3882692,4884STDY7663282,,,SCGC_3784_D11,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,23, +5,22963468,4884STDY7663283,,TTGACTCT,,Standard,TTGACTCT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362292,3,22963468,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3266_E05,4884STDY7663283,3882693,4884STDY7663283,,,SCGC_3266_E05,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,24, +5,22963385,4884STDY7663284,,TGCGATCT,,Standard,TGCGATCT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362292,3,22963385,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3784_E06,4884STDY7663284,3882694,4884STDY7663284,,,SCGC_3784_E06,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,25, +5,22963397,4884STDY7663285,,TTCCTGCT,,Standard,TTCCTGCT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362292,3,22963397,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3784_F04,4884STDY7663285,3882695,4884STDY7663285,,,SCGC_3784_F04,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,26, +5,22963409,4884STDY7663286,,TAGTGACT,,Standard,TAGTGACT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362292,3,22963409,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3784_G02,4884STDY7663286,3882696,4884STDY7663286,,,SCGC_3784_G02,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,27, +5,22963421,4884STDY7663287,,TACAGGAT,,Standard,TACAGGAT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362292,3,22963421,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3784_G03,4884STDY7663287,3882697,4884STDY7663287,,,SCGC_3784_G03,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,28, +5,22963433,4884STDY7663288,,TCCTCAAT,,Standard,TCCTCAAT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362292,3,22963433,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3266_H03,4884STDY7663288,3882698,4884STDY7663288,,,SCGC_3266_H03,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,29, +5,22766063,phiX_for_spiked_buffers,,ACAACGCAATC,,,ACAACGCAATC,,,,,,,1,0,23362292,3,22766063,,10847,,,,standard,,,,,,,0,,,1255141,phiX_for_spiked_buffers,,PhiX (Sanger-SNPs),,888,,1,0,0,None,198,Illumina Controls, ,0,,888, +6,22963382,4884STDY7663260,,ATCACGTT,,Standard,ATCACGTT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362293,3,22963382,,,S1729,,,standard,,,from:450 to:450,,,,0,,4884STDY7663260,3882670,4884STDY7663260,,,SCGC_2649_B01,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,1, +6,22963394,4884STDY7663261,,CGATGTTT,,Standard,CGATGTTT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362293,3,22963394,,,S1729,,,standard,,,from:450 to:450,,,,0,,4884STDY7663261,3882671,4884STDY7663261,,,SCGC_2648_B03,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,2, +6,22963406,4884STDY7663262,,TTAGGCAT,,Standard,TTAGGCAT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362293,3,22963406,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_2648_B06,4884STDY7663262,3882672,4884STDY7663262,,,SCGC_2648_B06,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,3, +6,22963418,4884STDY7663263,,TGACCACT,,Standard,TGACCACT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362293,3,22963418,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_2648_D12,4884STDY7663263,3882673,4884STDY7663263,,,SCGC_2648_D12,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,4, +6,22963430,4884STDY7663264,,ACAGTGGT,,Standard,ACAGTGGT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362293,3,22963430,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_2649_E01,4884STDY7663264,3882674,4884STDY7663264,,,SCGC_2649_E01,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,5, +6,22963442,4884STDY7663265,,GCCAATGT,,Standard,GCCAATGT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362293,3,22963442,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_2648_E09,4884STDY7663265,3882675,4884STDY7663265,,,SCGC_2648_E09,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,6, +6,22963454,4884STDY7663266,,CAGATCTG,,Standard,CAGATCTG,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362293,3,22963454,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_2649_F02,4884STDY7663266,3882676,4884STDY7663266,,,SCGC_2649_F02,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,7, +6,22963466,4884STDY7663267,,ACTTGATG,,Standard,ACTTGATG,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362293,3,22963466,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_2648_F12,4884STDY7663267,3882677,4884STDY7663267,,,SCGC_2648_F12,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,8, +6,22963383,4884STDY7663268,,GATCAGCG,,Standard,GATCAGCG,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362293,3,22963383,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_2648_G09,4884STDY7663268,3882678,4884STDY7663268,,,SCGC_2648_G09,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,9, +6,22963395,4884STDY7663269,,TAGCTTGT,,Standard,TAGCTTGT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362293,3,22963395,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_2649_H06,4884STDY7663269,3882679,4884STDY7663269,,,SCGC_2649_H06,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,10, +6,22963407,4884STDY7663270,,GGCTACAG,,Standard,GGCTACAG,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362293,3,22963407,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3264_A01,4884STDY7663270,3882680,4884STDY7663270,,,SCGC_3264_A01,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,11, +6,22963419,4884STDY7663271,,CTTGTACT,,Standard,CTTGTACT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362293,3,22963419,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3265_A09,4884STDY7663271,3882681,4884STDY7663271,,,SCGC_3265_A09,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,12, +6,22963431,4884STDY7663272,,TGGTTGTT,,Standard,TGGTTGTT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362293,3,22963431,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3264_E04,4884STDY7663272,3882682,4884STDY7663272,,,SCGC_3264_E04,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,13, +6,22963443,4884STDY7663273,,TCTCGGTT,,Standard,TCTCGGTT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362293,3,22963443,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3264_E08,4884STDY7663273,3882683,4884STDY7663273,,,SCGC_3264_E08,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,14, +6,22963455,4884STDY7663274,,TAAGCGTT,,Standard,TAAGCGTT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362293,3,22963455,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3264_E12,4884STDY7663274,3882684,4884STDY7663274,,,SCGC_3264_E12,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,15, +6,22963467,4884STDY7663275,,TCCGTCTT,,Standard,TCCGTCTT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362293,3,22963467,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_2649_G09,4884STDY7663275,3882685,4884STDY7663275,,,SCGC_2649_G09,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,16, +6,22963384,4884STDY7663276,,TGTACCTT,,Standard,TGTACCTT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362293,3,22963384,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3265_E04,4884STDY7663276,3882686,4884STDY7663276,,,SCGC_3265_E04,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,17, +6,22963396,4884STDY7663277,,TTCTGTGT,,Standard,TTCTGTGT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362293,3,22963396,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3265_F07,4884STDY7663277,3882687,4884STDY7663277,,,SCGC_3265_F07,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,18, +6,22963408,4884STDY7663278,,TCTGCTGT,,Standard,TCTGCTGT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362293,3,22963408,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3266_B09,4884STDY7663278,3882688,4884STDY7663278,,,SCGC_3266_B09,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,19, +6,22963420,4884STDY7663279,,TTGGAGGT,,Standard,TTGGAGGT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362293,3,22963420,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3266_C06,4884STDY7663279,3882689,4884STDY7663279,,,SCGC_3266_C06,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,20, +6,22963432,4884STDY7663280,,TCGAGCGT,,Standard,TCGAGCGT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362293,3,22963432,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3266_C08,4884STDY7663280,3882690,4884STDY7663280,,,SCGC_3266_C08,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,21, +6,22963444,4884STDY7663281,,TGATACGT,,Standard,TGATACGT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362293,3,22963444,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3266_D09,4884STDY7663281,3882691,4884STDY7663281,,,SCGC_3266_D09,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,22, +6,22963456,4884STDY7663282,,TGCATAGT,,Standard,TGCATAGT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362293,3,22963456,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3784_D11,4884STDY7663282,3882692,4884STDY7663282,,,SCGC_3784_D11,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,23, +6,22963468,4884STDY7663283,,TTGACTCT,,Standard,TTGACTCT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362293,3,22963468,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3266_E05,4884STDY7663283,3882693,4884STDY7663283,,,SCGC_3266_E05,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,24, +6,22963385,4884STDY7663284,,TGCGATCT,,Standard,TGCGATCT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362293,3,22963385,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3784_E06,4884STDY7663284,3882694,4884STDY7663284,,,SCGC_3784_E06,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,25, +6,22963397,4884STDY7663285,,TTCCTGCT,,Standard,TTCCTGCT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362293,3,22963397,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3784_F04,4884STDY7663285,3882695,4884STDY7663285,,,SCGC_3784_F04,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,26, +6,22963409,4884STDY7663286,,TAGTGACT,,Standard,TAGTGACT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362293,3,22963409,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3784_G02,4884STDY7663286,3882696,4884STDY7663286,,,SCGC_3784_G02,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,27, +6,22963421,4884STDY7663287,,TACAGGAT,,Standard,TACAGGAT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362293,3,22963421,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3784_G03,4884STDY7663287,3882697,4884STDY7663287,,,SCGC_3784_G03,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,28, +6,22963433,4884STDY7663288,,TCCTCAAT,,Standard,TCCTCAAT,,cdt@sanger.ac.uk cs4@sanger.ac.uk dl7@sanger.ac.uk lm5@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,dl7@sanger.ac.uk rr11@sanger.ac.uk sg18@sanger.ac.uk som@sanger.ac.uk tv2@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362293,3,22963433,,9606,S1729,,,standard,,,from:450 to:450,,,Homo sapiens,0,SCGC_3266_H03,4884STDY7663288,3882698,4884STDY7663288,,,SCGC_3266_H03,888,EGAS00001002600,1,0,0,This study includes single cell whole genome and transcriptom sequencing of single neuron cells (using G%26T method). Samples are from%3A normal human brains%2C patients with taupathies and Alzheimer disease.,4884,Human brain Alzheimer study-DNA,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Human brain Alzheimer study-DNA,29, +6,22766063,phiX_for_spiked_buffers,,ACAACGCAATC,,,ACAACGCAATC,,,,,,,1,0,23362293,3,22766063,,10847,,,,standard,,,,,,,0,,,1255141,phiX_for_spiked_buffers,,PhiX (Sanger-SNPs),,888,,1,0,0,None,198,Illumina Controls, ,0,,888, +7,22963399,ERS2757790,,TGTATGCG,,Standard,TGTATGCG,,rh20@sanger.ac.uk slw@sanger.ac.uk,rh20@sanger.ac.uk,slw@sanger.ac.uk,,,0,0,23362294,3,22963399,,9606,S0808,,,standard,,,from:450 to:450,ERS2757790,,Homo sapiens,0,,HipSciWGSOA7638932,3858244,HipSciWGSOA7638932,polyclonal_ieki3,,polyclonal_ieki3,888,ERP017015,1,0,0,The HipSci project brings together diverse constituents in genomics%2C proteomics%2C cell biology and clinical genetics to create a UK national iPS cell resource and use it to carry out cellular genetic studies. In this sub-study we perform whole genome sequencing on iPS cells generated from skin biopsies from healthy volunteers. ,4264,IHTP_WGS_HIPSCI_NORMALS_OA,Homo_sapiens (1000Genomes_hs37d5),1,HipSci - Whole genome sequencing - healthy volunteers,1, +7,22963411,ERS2757791,,TCATTGAG,,Standard,TCATTGAG,,rh20@sanger.ac.uk slw@sanger.ac.uk,rh20@sanger.ac.uk,slw@sanger.ac.uk,,,0,0,23362294,3,22963411,,9606,S0808,,,standard,,,from:450 to:450,ERS2757791,,Homo sapiens,0,,HipSciWGSOA7638933,3858245,HipSciWGSOA7638933,polyclonal_euts1,,polyclonal_euts1,888,ERP017015,1,0,0,The HipSci project brings together diverse constituents in genomics%2C proteomics%2C cell biology and clinical genetics to create a UK national iPS cell resource and use it to carry out cellular genetic studies. In this sub-study we perform whole genome sequencing on iPS cells generated from skin biopsies from healthy volunteers. ,4264,IHTP_WGS_HIPSCI_NORMALS_OA,Homo_sapiens (1000Genomes_hs37d5),1,HipSci - Whole genome sequencing - healthy volunteers,2, +7,22963423,ERS2757792,,TGGCTCAG,,Standard,TGGCTCAG,,rh20@sanger.ac.uk slw@sanger.ac.uk,rh20@sanger.ac.uk,slw@sanger.ac.uk,,,0,0,23362294,3,22963423,,9606,S0808,,,standard,,,from:450 to:450,ERS2757792,,Homo sapiens,0,,HipSciWGSOA7638934,3858246,HipSciWGSOA7638934,polyclonal_oaqd3,,polyclonal_oaqd3,888,ERP017015,1,0,0,The HipSci project brings together diverse constituents in genomics%2C proteomics%2C cell biology and clinical genetics to create a UK national iPS cell resource and use it to carry out cellular genetic studies. In this sub-study we perform whole genome sequencing on iPS cells generated from skin biopsies from healthy volunteers. ,4264,IHTP_WGS_HIPSCI_NORMALS_OA,Homo_sapiens (1000Genomes_hs37d5),1,HipSci - Whole genome sequencing - healthy volunteers,3, +7,22963435,ERS2757793,,TATGCCAG,,Standard,TATGCCAG,,rh20@sanger.ac.uk slw@sanger.ac.uk,rh20@sanger.ac.uk,slw@sanger.ac.uk,,,0,0,23362294,3,22963435,,9606,S0808,,,standard,,,from:450 to:450,ERS2757793,,Homo sapiens,0,,HipSciWGSOA7638935,3858247,HipSciWGSOA7638935,polyclonal_nufh3,,polyclonal_nufh3,888,ERP017015,1,0,0,The HipSci project brings together diverse constituents in genomics%2C proteomics%2C cell biology and clinical genetics to create a UK national iPS cell resource and use it to carry out cellular genetic studies. In this sub-study we perform whole genome sequencing on iPS cells generated from skin biopsies from healthy volunteers. ,4264,IHTP_WGS_HIPSCI_NORMALS_OA,Homo_sapiens (1000Genomes_hs37d5),1,HipSci - Whole genome sequencing - healthy volunteers,4, +7,22963447,ERS2757794,,TCAGATTC,,Standard,TCAGATTC,,rh20@sanger.ac.uk slw@sanger.ac.uk,rh20@sanger.ac.uk,slw@sanger.ac.uk,,,0,0,23362294,3,22963447,,9606,S0808,,,standard,,,from:450 to:450,ERS2757794,,Homo sapiens,0,,HipSciWGSOA7638936,3858248,HipSciWGSOA7638936,polyclonal_babz3,,polyclonal_babz3,888,ERP017015,1,0,0,The HipSci project brings together diverse constituents in genomics%2C proteomics%2C cell biology and clinical genetics to create a UK national iPS cell resource and use it to carry out cellular genetic studies. In this sub-study we perform whole genome sequencing on iPS cells generated from skin biopsies from healthy volunteers. ,4264,IHTP_WGS_HIPSCI_NORMALS_OA,Homo_sapiens (1000Genomes_hs37d5),1,HipSci - Whole genome sequencing - healthy volunteers,5, +7,22766063,phiX_for_spiked_buffers,,ACAACGCAATC,,,ACAACGCAATC,,,,,,,1,0,23362294,3,22766063,,10847,,,,standard,,,,,,,0,,,1255141,phiX_for_spiked_buffers,,PhiX (Sanger-SNPs),,888,,1,0,0,None,198,Illumina Controls, ,0,,888, +8,22963459,EGAN00001838515,,TACTAGTC,,Standard,TACTAGTC,,cdt@sanger.ac.uk cs4@sanger.ac.uk las@sanger.ac.uk lm5@sanger.ac.uk mdc1@sanger.ac.uk sb31@sanger.ac.uk som@sanger.ac.uk,las@sanger.ac.uk mdc1@sanger.ac.uk sb31@sanger.ac.uk som@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362295,3,22963459,,9606,S4194,,,standard,,,from:450 to:450,EGAN00001838515,Normal,Homo sapiens,0,,PD40312b,3877290,4494STDY7657888,,,PD40312b,888,EGAS00001002167,1,0,0,This is a continuation of the osteosarcoma work we have undertaken.,4494,Osteosarcoma_X10,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Osteosarcoma_X10,1, +8,22963471,EGAN00001838516,,TTCAGCTC,,Standard,TTCAGCTC,,cdt@sanger.ac.uk cs4@sanger.ac.uk las@sanger.ac.uk lm5@sanger.ac.uk mdc1@sanger.ac.uk sb31@sanger.ac.uk som@sanger.ac.uk,las@sanger.ac.uk mdc1@sanger.ac.uk sb31@sanger.ac.uk som@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362295,3,22963471,,9606,S4194,,,standard,,,from:450 to:450,EGAN00001838516,Normal,Homo sapiens,0,,PD40306b,3877291,4494STDY7657889,,,PD40306b,888,EGAS00001002167,1,0,0,This is a continuation of the osteosarcoma work we have undertaken.,4494,Osteosarcoma_X10,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Osteosarcoma_X10,2, +8,22963400,EGAN00001838518,,TATGTGGC,,Standard,TATGTGGC,,cdt@sanger.ac.uk cs4@sanger.ac.uk las@sanger.ac.uk lm5@sanger.ac.uk mdc1@sanger.ac.uk sb31@sanger.ac.uk som@sanger.ac.uk,las@sanger.ac.uk mdc1@sanger.ac.uk sb31@sanger.ac.uk som@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362295,3,22963400,,9606,S4194,,,standard,,,from:450 to:450,EGAN00001838518,Tumour,Homo sapiens,0,,PD40312a,3877293,4494STDY7657891,,,PD40312a,888,EGAS00001002167,1,0,0,This is a continuation of the osteosarcoma work we have undertaken.,4494,Osteosarcoma_X10,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Osteosarcoma_X10,3, +8,22963412,EGAN00001838519,,TTACTCGC,,Standard,TTACTCGC,,cdt@sanger.ac.uk cs4@sanger.ac.uk las@sanger.ac.uk lm5@sanger.ac.uk mdc1@sanger.ac.uk sb31@sanger.ac.uk som@sanger.ac.uk,las@sanger.ac.uk mdc1@sanger.ac.uk sb31@sanger.ac.uk som@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362295,3,22963412,,9606,S4194,,,standard,,,from:450 to:450,EGAN00001838519,Tumour,Homo sapiens,0,,PD40312c,3877294,4494STDY7657892,,,PD40312c,888,EGAS00001002167,1,0,0,This is a continuation of the osteosarcoma work we have undertaken.,4494,Osteosarcoma_X10,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Osteosarcoma_X10,4, +8,22963424,EGAN00001838520,,TCGTTAGC,,Standard,TCGTTAGC,,cdt@sanger.ac.uk cs4@sanger.ac.uk las@sanger.ac.uk lm5@sanger.ac.uk mdc1@sanger.ac.uk sb31@sanger.ac.uk som@sanger.ac.uk,las@sanger.ac.uk mdc1@sanger.ac.uk sb31@sanger.ac.uk som@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362295,3,22963424,,9606,S4194,,,standard,,,from:450 to:450,EGAN00001838520,Tumour,Homo sapiens,0,,PD40312d,3877295,4494STDY7657893,,,PD40312d,888,EGAS00001002167,1,0,0,This is a continuation of the osteosarcoma work we have undertaken.,4494,Osteosarcoma_X10,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Osteosarcoma_X10,5, +8,22963436,EGAN00001838521,,TACCGAGC,,Standard,TACCGAGC,,cdt@sanger.ac.uk cs4@sanger.ac.uk las@sanger.ac.uk lm5@sanger.ac.uk mdc1@sanger.ac.uk sb31@sanger.ac.uk som@sanger.ac.uk,las@sanger.ac.uk mdc1@sanger.ac.uk sb31@sanger.ac.uk som@sanger.ac.uk,cdt@sanger.ac.uk cs4@sanger.ac.uk lm5@sanger.ac.uk,lm5@sanger.ac.uk,,0,0,23362295,3,22963436,,9606,S4194,,,standard,,,from:450 to:450,EGAN00001838521,Tumour,Homo sapiens,0,,PD40312e,3877296,4494STDY7657894,,,PD40312e,888,EGAS00001002167,1,0,0,This is a continuation of the osteosarcoma work we have undertaken.,4494,Osteosarcoma_X10,Homo_sapiens (1000Genomes_hs37d5 %2B ensembl_75_transcriptome),0,Osteosarcoma_X10,6, +8,22766063,phiX_for_spiked_buffers,,ACAACGCAATC,,,ACAACGCAATC,,,,,,,1,0,23362295,3,22766063,,10847,,,,standard,,,,,,,0,,,1255141,phiX_for_spiked_buffers,,PhiX (Sanger-SNPs),,888,,1,0,0,None,198,Illumina Controls, ,0,,888, From 532f2934e5e9903080c344350755f0dc9b373f4f Mon Sep 17 00:00:00 2001 From: Ruben Bautista G Date: Thu, 17 Jan 2019 15:20:09 +0000 Subject: [PATCH 2/2] Fix tests --- t/10-mapd-find.t | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/t/10-mapd-find.t b/t/10-mapd-find.t index 62125f43..75b31cd9 100644 --- a/t/10-mapd-find.t +++ b/t/10-mapd-find.t @@ -14,7 +14,7 @@ my $tmp_repos = tempdir(CLEANUP => 1); local $ENV{NPG_WEBSERVICE_CACHE_DIR} = $tmp_repos; my $ref_dir = catdir($tmp_repos,'custom_analysis','mapd','Homo_sapiens','1000Genomes_hs37d5'); -`mkdir -p $ref_dir/{MappableBINS,chromosomes}`; +make_path(catdir($ref_dir, 'MappableBINS'), catdir($ref_dir, 'chromosomes')); `touch $ref_dir/MappableBINS/Combined_Homo_sapiens_1000Genomes_hs37d5_100000_151bases_mappable_bins_GCperc_INPUT.txt`; `touch $ref_dir/MappableBINS/Combined_Homo_sapiens_1000Genomes_hs37d5_100000_151bases_mappable_bins.bed`; `touch $ref_dir/MappableBINS/Combined_Homo_sapiens_1000Genomes_hs37d5_500000_151bases_mappable_bins_GCperc_INPUT.txt`;