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One-two other updates concerning change of approach. Signed-off-by: Anurag Priyam <[email protected]>
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@@ -66,7 +66,7 @@ Minimalist example: | |
```shell | ||
Yannick@n56-169 ~/g/oswitch> uname -a | ||
Darwin n56-169.sbcs.qmul.ac.uk 14.0.0 Darwin Kernel Version 14.0.0: Fri Sep 19 00:26:44 PDT 2014; root:xnu-2782.1.97~2/RELEASE_X86_64 x86_64 | ||
Yannick@n56-169 ~/g/oswitch> bundle exec bin/oswitch biolinux_8 | ||
Yannick@n56-169 ~/g/oswitch> oswitch yeban/biolinux:8 | ||
### You are now running: biolinux_8, in container: biolinux_8-27182. ### | ||
Yannick@biolinux_8-27182 ~/g/oswitch> uname -a | ||
Linux biolinux_8-27182 3.16.4-tinycore64 #1 SMP Thu Oct 23 16:14:24 UTC 2014 x86_64 x86_64 x86_64 GNU/Linux | ||
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@@ -209,18 +209,15 @@ The following should give an encouraging message: | |
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$ docker run hello-world | ||
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#### Install OSwitch | ||
#### Install oswitch | ||
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$ git clone https://github.com/yeban/oswitch | ||
$ cd oswitch | ||
$ gem install bundler && bundle | ||
$ bundle exec bin/oswitch biolinux | ||
Requirements: Ruby 2.0 or higher. | ||
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$ gem install oswitch | ||
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Obtaining BioLinux can take a long time (e.g. up to 20 minutes on a fast new | ||
macbook with a university gigabit connection). You may quickly want to test oswitch's feature | ||
set using Ubuntu. | ||
#### Testing oswitch | ||
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$ bundle exec bin/oswitch ubuntu:14.04 | ||
$ oswitch ubuntu:14.04 | ||
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## FAQ | ||
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@@ -264,7 +261,7 @@ repository, please include the Dockerfile as well. | |
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1. ~~make it possible to use docker containers without inheriting our | ||
current baseimage~~ | ||
2. gem distribution for easier installation | ||
2. ~~gem distribution for easier installation~~ | ||
3. brew recipe for Mac | ||
4. test on QMUL's compute cluster | ||
5. create an SELinux policy to run oswitch on CentOS without having to disable | ||
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@@ -273,6 +270,13 @@ SELinux entirely | |
7. make available images for common bioinformatics software | ||
8. deploy at [RAL/JASMIN](http://www.jasmin.ac.uk) | ||
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## Contribute | ||
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$ git clone https://github.com/yeban/oswitch | ||
$ cd oswitch | ||
$ gem install bundler && bundle | ||
$ bundle exec bin/oswitch biolinux | ||
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## Contributors & Funding | ||
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* Anurag Priyam - [[email protected]](mailto:[email protected]) | [@yeban](//twitter.com/yeban) | ||
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