Bump versions for noodles 0.67.0

zaeleus · Mar 28, 2024 · 4f72542 · 4f72542
1 parent 59d8097
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Showing 27 changed files with 129 additions and 60 deletions.
diff --git a/README.md b/README.md
@@ -20,7 +20,7 @@ list; and formats, listed as [features]. For example, to work with the BAM
 format, enable the `bam` feature.
 
 ```toml
-noodles = { version = "0.66.0", features = ["bam"] }
+noodles = { version = "0.67.0", features = ["bam"] }
 ```
 
 Each enabled feature can then be imported by its re-exported name, e.g.,

diff --git a/noodles-bam/CHANGELOG.md b/noodles-bam/CHANGELOG.md
@@ -1,6 +1,6 @@
 # Changelog
 
-## Unreleased
+## 0.58.0 - 2024-03-28
 
 ### Changed
 

diff --git a/noodles-bam/Cargo.toml b/noodles-bam/Cargo.toml
@@ -1,6 +1,6 @@
 [package]
 name = "noodles-bam"
-version = "0.57.0"
+version = "0.58.0"
 authors = ["Michael Macias <[email protected]>"]
 license.workspace = true
 edition.workspace = true
@@ -22,13 +22,13 @@ futures = { workspace = true, optional = true, features = ["std"] }
 indexmap.workspace = true
 tokio = { workspace = true, optional = true, features = ["fs", "io-util"] }
 
-noodles-bgzf = { path = "../noodles-bgzf", version = "0.27.0" }
+noodles-bgzf = { path = "../noodles-bgzf", version = "0.28.0" }
 noodles-core = { path = "../noodles-core", version = "0.14.0" }
-noodles-csi = { path = "../noodles-csi", version = "0.31.0" }
-noodles-sam = { path = "../noodles-sam", version = "0.54.0" }
+noodles-csi = { path = "../noodles-csi", version = "0.32.0" }
+noodles-sam = { path = "../noodles-sam", version = "0.55.0" }
 
 [dev-dependencies]
-noodles-sam = { path = "../noodles-sam", version = "0.54.0", features = ["async"] }
+noodles-sam = { path = "../noodles-sam", version = "0.55.0", features = ["async"] }
 tokio = { workspace = true, features = ["io-std", "macros", "rt-multi-thread"] }
 
 [package.metadata.docs.rs]

diff --git a/noodles-bcf/CHANGELOG.md b/noodles-bcf/CHANGELOG.md
@@ -1,5 +1,11 @@
 # Changelog
 
+## 0.48.0 - 2024-03-28
+
+### Changed
+
+  * bcf: Sync dependencies.
+
 ## 0.47.0 - 2024-03-12
 
 ### Changed

diff --git a/noodles-bcf/Cargo.toml b/noodles-bcf/Cargo.toml
@@ -1,6 +1,6 @@
 [package]
 name = "noodles-bcf"
-version = "0.47.0"
+version = "0.48.0"
 authors = ["Michael Macias <[email protected]>"]
 license.workspace = true
 edition.workspace = true
@@ -16,10 +16,10 @@ async = ["dep:futures", "dep:tokio", "noodles-bgzf/async", "noodles-csi/async"]
 [dependencies]
 byteorder.workspace = true
 indexmap.workspace = true
-noodles-bgzf = { path = "../noodles-bgzf", version = "0.27.0" }
+noodles-bgzf = { path = "../noodles-bgzf", version = "0.28.0" }
 noodles-core = { path = "../noodles-core", version = "0.14.0" }
-noodles-csi = { path = "../noodles-csi", version = "0.31.0" }
-noodles-vcf = { path = "../noodles-vcf", version = "0.50.0" }
+noodles-csi = { path = "../noodles-csi", version = "0.32.0" }
+noodles-vcf = { path = "../noodles-vcf", version = "0.51.0" }
 
 futures = { workspace = true, optional = true, features = ["std"] }
 tokio = { workspace = true, optional = true, features = ["io-util"] }

diff --git a/noodles-bgzf/CHANGELOG.md b/noodles-bgzf/CHANGELOG.md
@@ -1,6 +1,6 @@
 # Changelog
 
-## Unreleased
+## 0.28.0 - 2024-03-28
 
 ### Changed
 

diff --git a/noodles-bgzf/Cargo.toml b/noodles-bgzf/Cargo.toml
@@ -1,6 +1,6 @@
 [package]
 name = "noodles-bgzf"
-version = "0.27.0"
+version = "0.28.0"
 authors = ["Michael Macias <[email protected]>"]
 license.workspace = true
 edition.workspace = true

diff --git a/noodles-cram/CHANGELOG.md b/noodles-cram/CHANGELOG.md
@@ -1,5 +1,11 @@
 # Changelog
 
+## 0.58.0 - 2024-03-28
+
+### Changed
+
+  * cram: Sync dependencies.
+
 ## 0.57.0 - 2024-03-12
 
 ### Changed

diff --git a/noodles-cram/Cargo.toml b/noodles-cram/Cargo.toml
@@ -1,6 +1,6 @@
 [package]
 name = "noodles-cram"
-version = "0.57.0"
+version = "0.58.0"
 authors = ["Michael Macias <[email protected]>"]
 license.workspace = true
 edition.workspace = true
@@ -23,10 +23,10 @@ bzip2 = "0.4.4"
 flate2.workspace = true
 indexmap.workspace = true
 md-5 = "0.10.0"
-noodles-bam = { path = "../noodles-bam", version = "0.57.0" }
+noodles-bam = { path = "../noodles-bam", version = "0.58.0" }
 noodles-core = { path = "../noodles-core", version = "0.14.0" }
-noodles-fasta = { path = "../noodles-fasta", version = "0.34.0" }
-noodles-sam = { path = "../noodles-sam", version = "0.54.0" }
+noodles-fasta = { path = "../noodles-fasta", version = "0.35.0" }
+noodles-sam = { path = "../noodles-sam", version = "0.55.0" }
 xz2 = "0.1.6"
 
 async-compression = { version = "0.4.0", optional = true, features = ["gzip", "tokio"] }
@@ -37,7 +37,7 @@ tokio = { workspace = true, optional = true, features = ["fs", "io-util"] }
 libdeflater = { workspace = true, optional = true }
 
 [dev-dependencies]
-noodles-sam = { path = "../noodles-sam", version = "0.54.0", features = ["async"] }
+noodles-sam = { path = "../noodles-sam", version = "0.55.0", features = ["async"] }
 tokio = { workspace = true, features = ["io-std", "macros", "rt-multi-thread"] }
 
 [package.metadata.docs.rs]

diff --git a/noodles-csi/CHANGELOG.md b/noodles-csi/CHANGELOG.md
@@ -1,5 +1,11 @@
 # Changelog
 
+## 0.32.0 - 2024-03-28
+
+### Changed
+
+  * csi: Sync dependencies.
+
 ## 0.31.0 - 2024-03-12
 
 ### Changed

diff --git a/noodles-csi/Cargo.toml b/noodles-csi/Cargo.toml
@@ -1,6 +1,6 @@
 [package]
 name = "noodles-csi"
-version = "0.31.0"
+version = "0.32.0"
 authors = ["Michael Macias <[email protected]>"]
 license.workspace = true
 edition.workspace = true
@@ -17,7 +17,7 @@ async = ["dep:tokio", "noodles-bgzf/async"]
 bit-vec.workspace = true
 byteorder.workspace = true
 indexmap.workspace = true
-noodles-bgzf = { path = "../noodles-bgzf", version = "0.27.0" }
+noodles-bgzf = { path = "../noodles-bgzf", version = "0.28.0" }
 noodles-core = { path = "../noodles-core", version = "0.14.0" }
 
 tokio = { workspace = true, optional = true, features = ["fs", "io-util"] }

diff --git a/noodles-fasta/CHANGELOG.md b/noodles-fasta/CHANGELOG.md
@@ -1,5 +1,11 @@
 # Changelog
 
+## 0.35.0 - 2024-03-28
+
+### Changed
+
+  * fasta: Sync dependencies.
+
 ## 0.34.0 - 2024-03-12
 
 ### Changed

diff --git a/noodles-fasta/Cargo.toml b/noodles-fasta/Cargo.toml
@@ -1,6 +1,6 @@
 [package]
 name = "noodles-fasta"
-version = "0.34.0"
+version = "0.35.0"
 authors = ["Michael Macias <[email protected]>"]
 license.workspace = true
 edition.workspace = true
@@ -16,7 +16,7 @@ async = ["dep:tokio"]
 [dependencies]
 bytes.workspace = true
 memchr.workspace = true
-noodles-bgzf = { path = "../noodles-bgzf", version = "0.27.0" }
+noodles-bgzf = { path = "../noodles-bgzf", version = "0.28.0" }
 noodles-core = { path = "../noodles-core", version = "0.14.0" }
 
 tokio = { workspace = true, optional = true, features = ["io-util"] }

diff --git a/noodles-gff/CHANGELOG.md b/noodles-gff/CHANGELOG.md
@@ -1,5 +1,11 @@
 # Changelog
 
+## 0.29.0 - 2024-03-28
+
+### Changed
+
+  * gff: Sync dependencies.
+
 ## 0.28.0 - 2024-03-12
 
 ### Changed

diff --git a/noodles-gff/Cargo.toml b/noodles-gff/Cargo.toml
@@ -1,6 +1,6 @@
 [package]
 name = "noodles-gff"
-version = "0.28.0"
+version = "0.29.0"
 authors = ["Michael Macias <[email protected]>"]
 license.workspace = true
 edition.workspace = true
@@ -12,7 +12,7 @@ documentation = "https://docs.rs/noodles-gff"
 
 [dependencies]
 indexmap.workspace = true
-noodles-bgzf = { path = "../noodles-bgzf", version = "0.27.0" }
+noodles-bgzf = { path = "../noodles-bgzf", version = "0.28.0" }
 noodles-core = { path = "../noodles-core", version = "0.14.0" }
-noodles-csi = { path = "../noodles-csi", version = "0.31.0" }
+noodles-csi = { path = "../noodles-csi", version = "0.32.0" }
 percent-encoding.workspace = true
diff --git a/noodles-gtf/CHANGELOG.md b/noodles-gtf/CHANGELOG.md
@@ -1,5 +1,11 @@
 # Changelog
 
+## 0.25.0 - 2024-03-28
+
+### Changed
+
+  * gtf: Sync dependencies.
+
 ## 0.24.0 - 2024-03-12
 
 ### Changed

diff --git a/noodles-gtf/Cargo.toml b/noodles-gtf/Cargo.toml
@@ -1,6 +1,6 @@
 [package]
 name = "noodles-gtf"
-version = "0.24.0"
+version = "0.25.0"
 authors = ["Michael Macias <[email protected]>"]
 license.workspace = true
 edition.workspace = true
@@ -11,6 +11,6 @@ repository = "https://github.com/zaeleus/noodles"
 documentation = "https://docs.rs/noodles-gtf"
 
 [dependencies]
-noodles-bgzf = { path = "../noodles-bgzf", version = "0.27.0" }
+noodles-bgzf = { path = "../noodles-bgzf", version = "0.28.0" }
 noodles-core = { path = "../noodles-core", version = "0.14.0" }
-noodles-csi = { path = "../noodles-csi", version = "0.31.0" }
+noodles-csi = { path = "../noodles-csi", version = "0.32.0" }
diff --git a/noodles-sam/CHANGELOG.md b/noodles-sam/CHANGELOG.md
@@ -1,6 +1,6 @@
 # Changelog
 
-## Unreleased
+## 0.55.0 - 2024-03-28
 
 ### Changed
 

diff --git a/noodles-sam/Cargo.toml b/noodles-sam/Cargo.toml
@@ -1,6 +1,6 @@
 [package]
 name = "noodles-sam"
-version = "0.54.0"
+version = "0.55.0"
 authors = ["Michael Macias <[email protected]>"]
 license.workspace = true
 edition.workspace = true
@@ -19,9 +19,9 @@ bstr.workspace = true
 indexmap.workspace = true
 lexical-core = "0.8.5"
 memchr.workspace = true
-noodles-bgzf = { path = "../noodles-bgzf", version = "0.27.0" }
+noodles-bgzf = { path = "../noodles-bgzf", version = "0.28.0" }
 noodles-core = { path = "../noodles-core", version = "0.14.0" }
-noodles-csi = { path = "../noodles-csi", version = "0.31.0" }
+noodles-csi = { path = "../noodles-csi", version = "0.32.0" }
 
 futures = { workspace = true, optional = true, features = ["std"] }
 tokio = { workspace = true, optional = true, features = ["io-util"] }

diff --git a/noodles-tabix/CHANGELOG.md b/noodles-tabix/CHANGELOG.md
@@ -1,5 +1,11 @@
 # Changelog
 
+## 0.38.0 - 2024-03-28
+
+### Changed
+
+  * tabix: Sync dependencies.
+
 ## 0.37.0 - 2024-03-12
 
 ### Changed

diff --git a/noodles-tabix/Cargo.toml b/noodles-tabix/Cargo.toml
@@ -1,6 +1,6 @@
 [package]
 name = "noodles-tabix"
-version = "0.37.0"
+version = "0.38.0"
 authors = ["Michael Macias <[email protected]>"]
 license.workspace = true
 edition.workspace = true
@@ -17,9 +17,9 @@ async = ["dep:tokio", "noodles-bgzf/async"]
 bit-vec.workspace = true
 byteorder.workspace = true
 indexmap.workspace = true
-noodles-bgzf = { path = "../noodles-bgzf", version = "0.27.0" }
+noodles-bgzf = { path = "../noodles-bgzf", version = "0.28.0" }
 noodles-core = { path = "../noodles-core", version = "0.14.0" }
-noodles-csi = { path = "../noodles-csi", version = "0.31.0" }
+noodles-csi = { path = "../noodles-csi", version = "0.32.0" }
 
 tokio = { workspace = true, optional = true, features = ["fs", "io-util"] }
 

diff --git a/noodles-util/CHANGELOG.md b/noodles-util/CHANGELOG.md
@@ -1,5 +1,11 @@
 # Changelog
 
+## 0.39.0 - 2024-03-28
+
+### Changed
+
+  * util: Sync dependencies.
+
 ## 0.38.0 - 2024-03-12
 
 ### Changed

diff --git a/noodles-util/Cargo.toml b/noodles-util/Cargo.toml
@@ -1,6 +1,6 @@
 [package]
 name = "noodles-util"
-version = "0.38.0"
+version = "0.39.0"
 authors = ["Michael Macias <[email protected]>"]
 license.workspace = true
 edition.workspace = true
@@ -30,15 +30,15 @@ variant = [
 
 [dependencies]
 flate2 = { workspace = true }
-noodles-bam = { path = "../noodles-bam", version = "0.57.0", optional = true }
-noodles-bcf = { path = "../noodles-bcf", version = "0.47.0", optional = true }
-noodles-bgzf = { path = "../noodles-bgzf", version = "0.27.0", optional = true }
+noodles-bam = { path = "../noodles-bam", version = "0.58.0", optional = true }
+noodles-bcf = { path = "../noodles-bcf", version = "0.48.0", optional = true }
+noodles-bgzf = { path = "../noodles-bgzf", version = "0.28.0", optional = true }
 noodles-core = { path = "../noodles-core", version = "0.14.0", optional = true }
-noodles-cram = { path = "../noodles-cram", version = "0.57.0", optional = true }
-noodles-csi = { path = "../noodles-csi", version = "0.31.0", optional = true }
-noodles-fasta = { path = "../noodles-fasta", version = "0.34.0", optional = true }
-noodles-sam = { path = "../noodles-sam", version = "0.54.0", optional = true }
-noodles-vcf = { path = "../noodles-vcf", version = "0.50.0", optional = true }
+noodles-cram = { path = "../noodles-cram", version = "0.58.0", optional = true }
+noodles-csi = { path = "../noodles-csi", version = "0.32.0", optional = true }
+noodles-fasta = { path = "../noodles-fasta", version = "0.35.0", optional = true }
+noodles-sam = { path = "../noodles-sam", version = "0.55.0", optional = true }
+noodles-vcf = { path = "../noodles-vcf", version = "0.51.0", optional = true }
 
 [package.metadata.docs.rs]
 all-features = true

diff --git a/noodles-vcf/CHANGELOG.md b/noodles-vcf/CHANGELOG.md
@@ -1,5 +1,11 @@
 # Changelog
 
+## 0.51.0 - 2024-03-28
+
+### Changed
+
+  * vcf: Sync dependencies.
+
 ## 0.50.0 - 2024-03-12
 
 ### Changed

diff --git a/noodles-vcf/Cargo.toml b/noodles-vcf/Cargo.toml
@@ -1,6 +1,6 @@
 [package]
 name = "noodles-vcf"
-version = "0.50.0"
+version = "0.51.0"
 authors = ["Michael Macias <[email protected]>"]
 license.workspace = true
 edition.workspace = true
@@ -16,10 +16,10 @@ async = ["dep:futures", "dep:tokio", "noodles-bgzf/async", "noodles-tabix/async"
 [dependencies]
 indexmap.workspace = true
 memchr.workspace = true
-noodles-bgzf = { path = "../noodles-bgzf", version = "0.27.0" }
+noodles-bgzf = { path = "../noodles-bgzf", version = "0.28.0" }
 noodles-core = { path = "../noodles-core", version = "0.14.0" }
-noodles-csi = { path = "../noodles-csi", version = "0.31.0" }
-noodles-tabix = { path = "../noodles-tabix", version = "0.37.0" }
+noodles-csi = { path = "../noodles-csi", version = "0.32.0" }
+noodles-tabix = { path = "../noodles-tabix", version = "0.38.0" }
 percent-encoding.workspace = true
 
 futures = { workspace = true, optional = true, features = ["std"] }