diff --git a/README.md b/README.md index 5be8d8ebc..590399d5e 100644 --- a/README.md +++ b/README.md @@ -20,7 +20,7 @@ list; and formats, listed as [features]. For example, to work with the BAM format, enable the `bam` feature. ```toml -noodles = { version = "0.51.0", features = ["bam"] } +noodles = { version = "0.52.0", features = ["bam"] } ``` Each enabled feature can then be imported by its re-exported name, e.g., diff --git a/noodles-bam/CHANGELOG.md b/noodles-bam/CHANGELOG.md index a3c52a051..b30995a98 100644 --- a/noodles-bam/CHANGELOG.md +++ b/noodles-bam/CHANGELOG.md @@ -1,5 +1,11 @@ # Changelog +## 0.46.0 - 2023-09-21 + +### Changed + + * bam: Sync dependencies. + ## 0.45.0 - 2023-09-14 ### Changed diff --git a/noodles-bam/Cargo.toml b/noodles-bam/Cargo.toml index 1e928dcba..73811578d 100644 --- a/noodles-bam/Cargo.toml +++ b/noodles-bam/Cargo.toml @@ -1,6 +1,6 @@ [package] name = "noodles-bam" -version = "0.45.0" +version = "0.46.0" authors = ["Michael Macias "] license.workspace = true edition.workspace = true @@ -23,10 +23,10 @@ tokio = { workspace = true, optional = true, features = ["fs", "io-util"] } noodles-bgzf = { path = "../noodles-bgzf", version = "0.24.0" } noodles-core = { path = "../noodles-core", version = "0.12.0" } noodles-csi = { path = "../noodles-csi", version = "0.24.0" } -noodles-sam = { path = "../noodles-sam", version = "0.42.0" } +noodles-sam = { path = "../noodles-sam", version = "0.43.0" } [dev-dependencies] -noodles-sam = { path = "../noodles-sam", version = "0.42.0", features = ["async"] } +noodles-sam = { path = "../noodles-sam", version = "0.43.0", features = ["async"] } tokio = { workspace = true, features = ["io-std", "macros", "rt-multi-thread"] } [package.metadata.docs.rs] diff --git a/noodles-bcf/CHANGELOG.md b/noodles-bcf/CHANGELOG.md index 225dd3c2c..5feeb800b 100644 --- a/noodles-bcf/CHANGELOG.md +++ b/noodles-bcf/CHANGELOG.md @@ -1,5 +1,11 @@ # Changelog +## 0.37.0 - 2023-09-21 + +### Changed + + * bcf: Sync dependencies. + ## 0.36.0 - 2023-09-14 ### Removed diff --git a/noodles-bcf/Cargo.toml b/noodles-bcf/Cargo.toml index b453b0f6d..860ce9ed0 100644 --- a/noodles-bcf/Cargo.toml +++ b/noodles-bcf/Cargo.toml @@ -1,6 +1,6 @@ [package] name = "noodles-bcf" -version = "0.36.0" +version = "0.37.0" authors = ["Michael Macias "] license.workspace = true edition.workspace = true @@ -19,7 +19,7 @@ indexmap.workspace = true noodles-bgzf = { path = "../noodles-bgzf", version = "0.24.0" } noodles-core = { path = "../noodles-core", version = "0.12.0" } noodles-csi = { path = "../noodles-csi", version = "0.24.0" } -noodles-vcf = { path = "../noodles-vcf", version = "0.39.0" } +noodles-vcf = { path = "../noodles-vcf", version = "0.40.0" } futures = { workspace = true, optional = true, features = ["std"] } tokio = { workspace = true, optional = true, features = ["io-util"] } diff --git a/noodles-cram/CHANGELOG.md b/noodles-cram/CHANGELOG.md index 6a4130d23..2bb67f68b 100644 --- a/noodles-cram/CHANGELOG.md +++ b/noodles-cram/CHANGELOG.md @@ -1,5 +1,11 @@ # Changelog +## 0.43.0 - 2023-09-21 + +### Changed + + * cram: Sync dependencies. + ## 0.42.0 - 2023-09-14 ### Changed diff --git a/noodles-cram/Cargo.toml b/noodles-cram/Cargo.toml index da6cdbdcb..321906cc4 100644 --- a/noodles-cram/Cargo.toml +++ b/noodles-cram/Cargo.toml @@ -1,6 +1,6 @@ [package] name = "noodles-cram" -version = "0.42.0" +version = "0.43.0" authors = ["Michael Macias "] license.workspace = true edition.workspace = true @@ -21,10 +21,10 @@ bytes.workspace = true bzip2 = "0.4.4" flate2.workspace = true md-5 = "0.10.0" -noodles-bam = { path = "../noodles-bam", version = "0.45.0" } +noodles-bam = { path = "../noodles-bam", version = "0.46.0" } noodles-core = { path = "../noodles-core", version = "0.12.0" } noodles-fasta = { path = "../noodles-fasta", version = "0.29.0" } -noodles-sam = { path = "../noodles-sam", version = "0.42.0" } +noodles-sam = { path = "../noodles-sam", version = "0.43.0" } xz2 = "0.1.6" async-compression = { version = "0.4.0", optional = true, features = ["gzip", "tokio"] } @@ -35,7 +35,7 @@ tokio = { workspace = true, optional = true, features = ["fs", "io-util"] } libdeflater = { workspace = true, optional = true } [dev-dependencies] -noodles-sam = { path = "../noodles-sam", version = "0.42.0", features = ["async"] } +noodles-sam = { path = "../noodles-sam", version = "0.43.0", features = ["async"] } tokio = { workspace = true, features = ["io-std", "macros", "rt-multi-thread"] } [package.metadata.docs.rs] diff --git a/noodles-sam/CHANGELOG.md b/noodles-sam/CHANGELOG.md index c1d7d2562..3168c8163 100644 --- a/noodles-sam/CHANGELOG.md +++ b/noodles-sam/CHANGELOG.md @@ -1,6 +1,6 @@ # Changelog -## Unreleased +## 0.43.0 - 2023-09-21 ### Added diff --git a/noodles-sam/Cargo.toml b/noodles-sam/Cargo.toml index cb34f4f78..1f92abddb 100644 --- a/noodles-sam/Cargo.toml +++ b/noodles-sam/Cargo.toml @@ -1,6 +1,6 @@ [package] name = "noodles-sam" -version = "0.42.0" +version = "0.43.0" authors = ["Michael Macias "] license.workspace = true edition.workspace = true diff --git a/noodles-util/CHANGELOG.md b/noodles-util/CHANGELOG.md index 1c90fcbfc..bf5dd6d39 100644 --- a/noodles-util/CHANGELOG.md +++ b/noodles-util/CHANGELOG.md @@ -1,5 +1,11 @@ # Changelog +## 0.24.0 - 2023-09-21 + +### Changed + + * util: Sync dependencies. + ## 0.23.0 - 2023-09-14 ### Changed diff --git a/noodles-util/Cargo.toml b/noodles-util/Cargo.toml index b229dd513..ff81705db 100644 --- a/noodles-util/Cargo.toml +++ b/noodles-util/Cargo.toml @@ -1,6 +1,6 @@ [package] name = "noodles-util" -version = "0.23.0" +version = "0.24.0" authors = ["Michael Macias "] license.workspace = true edition.workspace = true @@ -30,15 +30,15 @@ variant = [ [dependencies] flate2 = { workspace = true } -noodles-bam = { path = "../noodles-bam", version = "0.45.0", optional = true } -noodles-bcf = { path = "../noodles-bcf", version = "0.36.0", optional = true } +noodles-bam = { path = "../noodles-bam", version = "0.46.0", optional = true } +noodles-bcf = { path = "../noodles-bcf", version = "0.37.0", optional = true } noodles-bgzf = { path = "../noodles-bgzf", version = "0.24.0", optional = true } noodles-core = { path = "../noodles-core", version = "0.12.0", optional = true } -noodles-cram = { path = "../noodles-cram", version = "0.42.0", optional = true } +noodles-cram = { path = "../noodles-cram", version = "0.43.0", optional = true } noodles-csi = { path = "../noodles-csi", version = "0.24.0", optional = true } noodles-fasta = { path = "../noodles-fasta", version = "0.29.0", optional = true } -noodles-sam = { path = "../noodles-sam", version = "0.42.0", optional = true } -noodles-vcf = { path = "../noodles-vcf", version = "0.39.0", optional = true } +noodles-sam = { path = "../noodles-sam", version = "0.43.0", optional = true } +noodles-vcf = { path = "../noodles-vcf", version = "0.40.0", optional = true } [package.metadata.docs.rs] all-features = true diff --git a/noodles-vcf/CHANGELOG.md b/noodles-vcf/CHANGELOG.md index 35a64ddef..a107d306e 100644 --- a/noodles-vcf/CHANGELOG.md +++ b/noodles-vcf/CHANGELOG.md @@ -1,6 +1,6 @@ # Changelog -## Unreleased +## 0.40.0 - 2023-09-21 ### Changed diff --git a/noodles-vcf/Cargo.toml b/noodles-vcf/Cargo.toml index 560764aba..f221c7893 100644 --- a/noodles-vcf/Cargo.toml +++ b/noodles-vcf/Cargo.toml @@ -1,6 +1,6 @@ [package] name = "noodles-vcf" -version = "0.39.0" +version = "0.40.0" authors = ["Michael Macias "] license.workspace = true edition.workspace = true diff --git a/noodles/CHANGELOG.md b/noodles/CHANGELOG.md index a8df967b2..75c414784 100644 --- a/noodles/CHANGELOG.md +++ b/noodles/CHANGELOG.md @@ -1,5 +1,14 @@ # Changelog +## 0.52.0 - 2023-09-21 + + * [noodles-bam 0.46.0](https://github.com/zaeleus/noodles/blob/noodles-bam-0.46.0/noodles-bam/CHANGELOG.md) + * [noodles-bcf 0.37.0](https://github.com/zaeleus/noodles/blob/noodles-bcf-0.37.0/noodles-bcf/CHANGELOG.md) + * [noodles-cram 0.43.0](https://github.com/zaeleus/noodles/blob/noodles-cram-0.43.0/noodles-cram/CHANGELOG.md) + * [noodles-sam 0.43.0](https://github.com/zaeleus/noodles/blob/noodles-sam-0.43.0/noodles-sam/CHANGELOG.md) + * [noodles-util 0.24.0](https://github.com/zaeleus/noodles/blob/noodles-util-0.24.0/noodles-util/CHANGELOG.md) + * [noodles-vcf 0.40.0](https://github.com/zaeleus/noodles/blob/noodles-vcf-0.40.0/noodles-vcf/CHANGELOG.md) + ## 0.51.0 - 2023-09-14 * [noodles-bam 0.45.0](https://github.com/zaeleus/noodles/blob/noodles-bam-0.45.0/noodles-bam/CHANGELOG.md) diff --git a/noodles/Cargo.toml b/noodles/Cargo.toml index 3b3cc4df0..7d8590791 100644 --- a/noodles/Cargo.toml +++ b/noodles/Cargo.toml @@ -1,6 +1,6 @@ [package] name = "noodles" -version = "0.51.0" +version = "0.52.0" authors = ["Michael Macias "] license.workspace = true edition.workspace = true @@ -12,12 +12,12 @@ documentation = "https://docs.rs/noodles" readme = "../README.md" [dependencies] -noodles-bam = { path = "../noodles-bam", version = "0.45.0", optional = true } -noodles-bcf = { path = "../noodles-bcf", version = "0.36.0", optional = true } +noodles-bam = { path = "../noodles-bam", version = "0.46.0", optional = true } +noodles-bcf = { path = "../noodles-bcf", version = "0.37.0", optional = true } noodles-bed = { path = "../noodles-bed", version = "0.10.0", optional = true } noodles-bgzf = { path = "../noodles-bgzf", version = "0.24.0", optional = true } noodles-core = { path = "../noodles-core", version = "0.12.0", optional = true } -noodles-cram = { path = "../noodles-cram", version = "0.42.0", optional = true } +noodles-cram = { path = "../noodles-cram", version = "0.43.0", optional = true } noodles-csi = { path = "../noodles-csi", version = "0.24.0", optional = true } noodles-fasta = { path = "../noodles-fasta", version = "0.29.0", optional = true } noodles-fastq = { path = "../noodles-fastq", version = "0.8.0", optional = true } @@ -25,9 +25,9 @@ noodles-gff = { path = "../noodles-gff", version = "0.20.0", optional = true } noodles-gtf = { path = "../noodles-gtf", version = "0.16.0", optional = true } noodles-htsget = { path = "../noodles-htsget", version = "0.2.0", optional = true } noodles-refget = { path = "../noodles-refget", version = "0.1.0", optional = true } -noodles-sam = { path = "../noodles-sam", version = "0.42.0", optional = true } +noodles-sam = { path = "../noodles-sam", version = "0.43.0", optional = true } noodles-tabix = { path = "../noodles-tabix", version = "0.29.0", optional = true } -noodles-vcf = { path = "../noodles-vcf", version = "0.39.0", optional = true } +noodles-vcf = { path = "../noodles-vcf", version = "0.40.0", optional = true } [features] default = []