This list is used by humans to keep track of our models as well as by
the function get_dir_ling() to find the directory associated with a
model id of the form yyyy.[ns].000.000 where the directory names
use the scheme yyyy.[ns].000.000.shortstring as described in
pfmc-assessments#32 (comment).
The elements are
- yyyy : the assessment model year
- [ns] : either n or s for north or south area; on Windows case matters; therefore, it would be good if we could all use lower case so that model directories sort similarly on everyone's machines and we do not have to push the shift key
- 000 : the base number
- 000 : the sensitivity number
- shortstring : a short character string without full stops but it can include any other character you desire
The model files are not stored in the repo and instead located on users local computers and shared via Google Drive: https://drive.google.com/drive/folders/1xkIZznTkVXHjhjWJOYJrMQO93qfD-O3V Please contact @iantaylor-NOAA or @kellijohnson-NOAA for access if you need it.
| name | notes | issue | source_model | script |
|---|---|---|---|---|
| 2017.n.001.001.final_base | 2017 base | #32 | archive | |
| 2017.s.001.001.final_base | 2017 base | #32 | archive | |
| 2017.s.002.001.SSv3.30.16.02 | testing newer SS version | #32 | 2017.s.001.001.final_base | models/lingcod_model_bridging_new_exe.R |
| 2019.n.001.001.cou | 2019 base | #32 | archive | |
| 2019.n.002.001.SSv3.30.16.02 | testing newer SS version | #32 | 2019.n.001.001.cou | models/lingcod_model_bridging_new_exe.R |
| 2019.s.001.001.cou | 2019 base | #32 | archive | |
| 2019.s.002.001.SSv3.30.16.02 | testing newer SS version | #32 | 2019.s.001.001.cou | models/lingcod_model_bridging_new_exe.R |
| 2019.s.002.002.SSv3.30.16.02_par | testing newer SS version | #32 | 2019.s.001.001.cou | models/lingcod_model_bridging_new_exe.R |
| 2019.s.003.001_update_catch_2019_structure | checking impact of new CA catch stream | #41 | 2019.s.002.001.SSv3.30.16.02_par | |
| 2019.n.003.001_update_catch_2019_structure | checking impact of new CA catch stream | #41 | 2019.n.002.001.SSv3.30.16.02 | |
| 2019.n.004.001_DM | apply Dirichlet-Multinomial to update_catch_2019_structure model | #49 | 2019.n.003.001_update_catch_2019_structure | |
| 2019.s.004.001_DM | apply Dirichlet-Multinomial to update_catch_2019_structure model | #49 | 2019.n.003.001_update_catch_2019_structure | |
| 2021.n.001.001_starting_point | renamed inputs and modified starter | #32 | 2019.s.002.001.SSv3.30.16.02 | lingcod_model_bridging_newfleets.R |
| 2021.s.001.001_starting_point | renamed inputs and modified starter | #32 | 2019.s.002.002.SSv3.30.16.02_par | lingcod_model_bridging_newfleets.R |
| 2021.n.002.001_new_fleets | reorganized fleets | #27 | 2021.n.001.001_starting_point | lingcod_model_bridging_newfleets.R |
| 2021.s.002.001_new_fleets | reorganized fleets | #27 | 2021.s.001.001_starting_point | lingcod_model_bridging_newfleets.R |
| 2021.n.003.001_DM | apply Dirichlet-Multinomial to new_fleets model | #49 | 2021.n.002.001_new_fleets | lingcod_model_bridging_DM.R |
| 2021.s.003.001_DM | apply Dirichlet-Multinomial to new_fleets model | #49 | 2021.s.002.001_new_fleets | lingcod_model_bridging_DM.R |
| 2021.n.004.001_new_data_test | adding new data, a work in progress | #32 | 2021.n.002.001_new_fleets | lingcod_model_bridging_newdata.R |
| 2021.s.004.001_new_data_test | adding new data, a work in progress | #32 | 2021.s.002.001_new_fleets | lingcod_model_bridging_newdata.R |
| 2021.n.004.002_new_data | adding new data after CPUE indices became available | #32, #56 | 2021.n.002.001_new_fleets | lingcod_model_bridging_newdata.R |
| 2021.s.004.002_new_data | adding new data after CPUE indices became available | #32, #56 | 2021.s.002.001_new_fleets | lingcod_model_bridging_newdata.R |
| 2021.n.004.003_new_data_fix1 | fix to marginal age comps added after 004.002 models | #32, #55, #56 | 2021.n.002.001_new_fleets | lingcod_model_bridging_newdata.R |
| 2021.s.004.003_new_data_fix1 | fix to marginal age comps added after 004.002 models | #32, #55, #56 | 2021.s.002.001_new_fleets | lingcod_model_bridging_newdata.R |
| 2021.n.004.004_new_data_fix2 | use unexpanded PacFIN length and marginal age comps | #69 | 2021.n.002.001_new_fleets | lingcod_model_bridging_newdata.R |
| 2021.s.004.004_new_data_fix2 | use unexpanded PacFIN length and marginal age comps | #69 | 2021.s.002.001_new_fleets | lingcod_model_bridging_newdata.R |
| 2021.n.004.005_fix1_filter_sparse | filter small samples with expanded data | #69 | 2021.n.004.003 | lingcod_model_filter_sparse_comps.R |
| 2021.s.004.005_fix1_filter_sparse | filter small samples with expanded data | #69 | 2021.n.004.003 | lingcod_model_filter_sparse_comps.R |
| 2021.n.004.006_fix2_filter_sparse | filter small samples with unexpanded data | #69 | 2021.n.004.004 | lingcod_model_filter_sparse_comps.R |
| 2021.s.004.006_fix2_filter_sparse | filter small samples with unexpanded data | #69 | 2021.n.004.004 | lingcod_model_filter_sparse_comps.R |
| 2021.n.004.007_revised_WA_rec_CPUE | include revised WA rec CPUE index along with unexpanded commercial comps and other fixes | #52 | 2021.n.002.001_new_fleets | lingcod_model_bridging_newdata.R |
| 2021.n.004.008_remove_extra_index | recORCPFV got added by accident | #20, #59 | 2021.n.002.001_new_fleets | lingcod_model_bridging_newdata.R |
| 2021.n.004.009_fix_duplicate_CAAL | CAAL for TW and FG were the same | #80 | 2021.n.002.001_new_fleets | lingcod_model_bridging_newdata.R |
| 2021.s.004.009_fix_duplicate_CAAL | CAAL for TW and FG were the same | #80 | 2021.n.002.001_new_fleets | lingcod_model_bridging_newdata.R |
| 2021.s.004.010_fewer_ages | remove ages for all but WCGBTS | 2021.s.004.009 | lingcod_model_bridging_newdata.R, remove_south_ages.R | |
| 2021.n.004.011_fewer_ages_scripted | remove ages for all but WCGBTS using the full workflow | #80, #83 | 2021.n.004.009 | lingcod_model_bridging_newdata.R, model_bridging_change_ages.R |
| 2021.s.004.011_fewer_ages_scripted | remove ages for all but WCGBTS using the full workflow | #80, #83 | 2021.s.004.009 | lingcod_model_bridging_newdata.R, model_bridging_change_ages.R |
| 2021.n.004.012_marginal_ages | marginal ages for all but WCGBTS | 2021.n.004.009 | lingcod_model_bridging_newdata.R, model_bridging_change_ages.R | |
| 2021.s.004.012_marginal_ages | marginal ages for all but WCGBTS | 2021.s.004.009 | lingcod_model_bridging_newdata.R, model_bridging_change_ages.R | |
| 2021.n.004.013_rec_CAAL | use CAAL for the rec fleets (previous had it marginal) | #80, #83 | 2021.n.002.001 | lingcod_model_bridging_newdata.R |
| 2021.n.004.014_no_fishery_ages | remove fishery ages, all others as CAAL | #87 | 2021.n.004.013 | lingcod_model_bridging_newdata.R, model_bridging_change_ages.R |
| 2021.s.004.014_no_fishery_ages | remove fishery ages, all others as CAAL | #87 | 2021.s.004.009 | lingcod_model_bridging_newdata.R, model_bridging_change_ages.R |
| 2021.n.005.001_initial_ctl_changes | initial default assumptions in the control file | #59 | 2021.n.004.002_new_data | lingcod_model_bridging_change_ctl.R |
| 2021.s.005.001_initial_ctl_changes | initial default assumptions in the control file | #59 | 2021.s.004.002_new_data | lingcod_model_bridging_change_ctl.R |
| 2021.n.006.001_next_ctl_changes | continuing control file changes while leaving model 5 results for exploration | #59 | 2021.n.004.002_new_data | lingcod_model_bridging_change_ctl.R |
| 2021.s.006.001_next_ctl_changes | continuing control file changes while leaving model 5 results for exploration | #59 | 2021.s.004.002_new_data | lingcod_model_bridging_change_ctl.R |
| 2021.n.007.001_get_tv_selex | use the control.ss_new file to get the automatically generated time-varying selectivity parameters from model 6 | #59 | 2021.n.006.001_next_ctl_changes | lingcod_model_bridging_change_ctl.R |
| 2021.s.007.001_get_tv_selex | use the control.ss_new file to get the automatically generated time-varying selectivity parameters from model 6 | #59 | 2021.s.006.001_next_ctl_changes | lingcod_model_bridging_change_ctl.R |
| 2021.n.007.002_DM | apply Dirichlet_Multinomial | #59 | 2021.n.007.001_get_tv_selex | lingcod_model_bridging_change_ctl.R |
| 2021.s.007.002_DM | apply Dirichlet_Multinomial | #59 | 2021.s.007.001_get_tv_selex | lingcod_model_bridging_change_ctl.R |
| 2021.n.007.003_Francis | apply Francis tuning | #59 | 2021.n.007.001_get_tv_selex | lingcod_model_bridging_change_ctl.R |
| 2021.s.007.003_Francis | apply Francis tuning | #59 | 2021.s.007.001_get_tv_selex | lingcod_model_bridging_change_ctl.R |
| 2021.n.008.001_selblocks | add new blocks for selectivity and retention | #58, #59, #61 | 2021.n.004.007 | lingcod_model_bridging_change_ctl.R |
| 2021.s.008.001_selblocks | add new blocks for selectivity and retention | #58, #59, #61 | 2021.s.004.004 | lingcod_model_bridging_change_ctl.R |
| 2021.n.008.002_add_forecast | adding forecast to above models | #59 | 2021.n.008.001 | lingcod_forecast.R |
| 2021.s.008.002_add_forecast | adding forecast to above models | #59 | 2021.s.008.001 | lingcod_forecast.R |
| 2021.n.008.003_fix_error | fix ADMB error by removing extra index, also add forecast | #59 | 2021.n.004.008 | lingcod_forecast.R, lingcod_model_bridging_change_ctl.R |
| 2021.n.008.004_Mbound_no_ret_male_offset | increase M upper bound to 5.0 (should have been 0.5), remove offset for male selectivity | #58, #59 | 2021.n.004.008 | lingcod_model_bridging_change_ctl.R |
| 2021.s.008.004_Mbound | increase M upper bound to 5.0 (should have been 0.5) | #59 | 2021.s.004.004 | lingcod_model_bridging_change_ctl.R |
| 2021.n.008.005_Francis | apply Francis tuning to previous model | #59 | 2021.n.008.004 | lingcod_model_bridging_change_ctl.R |
| 2021.s.008.005_Francis | apply Francis tuning to previous model | #59 | 2021.s.008.004 | lingcod_model_bridging_change_ctl.R |
| 2021.n.008.006_discardSD | increase discard uncertainty by 0.05 | #59 | 2021.n.008.005 | lingcod_model_bridging_change_ctl.R, lingcod_model_discardSD.R |
| 2021.s.008.006_discardSD | increase discard uncertainty by 0.05 | #59 | 2021.s.008.005 | lingcod_model_bridging_change_ctl.R, lingcod_model_discardSD.R |
| 2021.n.008.008_CV_growth1 | change CV_Growth_Pattern from 0 to 1 (with Growth_Age_for_L2 = 14) | #76 | 2021.n.008.005 | lingcod_model_bridging_change_ctl.R |
| 2021.s.008.008_CV_growth1 | change CV_Growth_Pattern from 0 to 1 | #76 | 2021.s.008.005 | lingcod_model_bridging_change_ctl.R |
| 2021.n.008.009_age999_for_L2 | increase Growth_Age_for_L2 to 999 | #76 | 2021.n.008.005 | lingcod_model_bridging_change_ctl.R |
| 2021.s.008.009_age999_for_L2 | increase Growth_Age_for_L2 to 999 | #76 | 2021.n.008.005 | lingcod_model_bridging_change_ctl.R |
| 2021.s.008.010_selex_test | initial_selex | #76 | 2021.n.008.005 | lingcod_model_bridging_change_ctl.R |
| 2021.s.008.011_selex_test2 | initial_selex | #76 | 2021.n.008.005 | lingcod_model_bridging_change_ctl.R |
| 2021.n.008.012_split_TRI_Q | estimate change in tri Q | #59 | 2021.n.008.006 | manual edit to control file |
| 2021.s.008.012_split_TRI_Q | estimate change in tri Q | #59 | 2021.n.008.006 | manual edit to control file |
| 2021.n.009.001_simplify | use 3.30.17.01, turn off a few parameters (remove block on Surv_TRI selex) | #76 | 2021.n.008.005 | lingcod_model_bridging_change_ctl.R, lingcod_forecast.R |
| 2021.s.009.001_simplify | use 3.30.17.01, turn off a few parameters (fix Q_extraSD_10_CPFV_DebWV = 0, remove block on Surv_TRI selex) | #76 | 2021.s.008.005 | lingcod_model_bridging_change_ctl.R, lingcod_forecast.R |
| 2021.n.009.002_applyFrancis | apply Francis tuning to model above | #76 | 2021.n.009.001 | lingcod_model_bridging_change_ctl.R, lingcod_forecast.R, r4ss::SS_tune_comps() |
| 2021.s.009.002_applyFrancis | apply Francis tuning to model above | #76 | 2021.n.009.001 | lingcod_model_bridging_change_ctl.R, lingcod_forecast.R, r4ss::SS_tune_comps() |
| 2021.n.009.003_asymptotic_FG | force fixed-gear selectivity asymptotic | #76 | 2021.n.009.001 | lingcod_model_bridging_change_ctl.R |
| 2021.s.009.003_asymptotic_FG | force fixed-gear selectivity asymptotic | #76 | 2021.n.009.001 | lingcod_model_bridging_change_ctl.R |
| 2021.n.010.001_fix_duplicate_CAAL | failed fix to remove duplicate CAAL from commercial fleets | #80 | 2021.n.004.009 | lingcod_model_bridging_change_ctl.R |
| 2021.s.010.001_fix_duplicate_CAAL | failed fix to remove duplicate CAAL from commercial fleets | #80 | 2021.n.004.009 | lingcod_model_bridging_change_ctl.R |
| 2021.n.010.002_Francis | apply Francis tuning to above models | #80 | 2021.n.010.001 | lingcod_model_bridging_change_ctl.R |
| 2021.s.010.002_Francis | apply Francis tuning to above models | #80 | 2021.n.010.001 | lingcod_model_bridging_change_ctl.R |
| 2021.n.011.001_v2_fix_duplicate_CAAL | FOR REAL remove duplicate CAAL from commercial fleets | #80 | 2021.n.004.009 | lingcod_model_bridging_change_ctl.R |
| 2021.s.011.001_v2_fix_duplicate_CAAL | FOR REAL remove duplicate CAAL from commercial fleets | #80 | 2021.n.004.009 | lingcod_model_bridging_change_ctl.R |
| 2021.n.011.002_v2_Francis | apply Francis tuning to above models | #80 | 2021.n.010.001 | lingcod_model_bridging_change_ctl.R |
| 2021.s.011.002_v2_Francis | apply Francis tuning to above models | #80 | 2021.n.010.001 | lingcod_model_bridging_change_ctl.R |
| 2021.n.011.003_Mprior | divide sd of M prior by 2 | #80 | 2021.n.011.002 | lingcod_model_bridging_change_ctl.R |
| 2021.s.011.003_Mprior | divide sd of M prior by 2 | #80 | 2021.n.011.002 | lingcod_model_bridging_change_ctl.R |
| 2021.n.011.004_Mprior_est_h | divide sd of M prior by 2 and estimate steepness | #80 | 2021.n.011.002 | lingcod_model_bridging_change_ctl.R |
| 2021.s.011.004_Mprior_est_h | divide sd of M prior by 2 and estimate steepness | #80 | 2021.n.011.002 | lingcod_model_bridging_change_ctl.R |
| 2021.n.011.005_Rec_CA_blocks | add blocks to Rec_CA catch and Q | #80 | 2021.n.011.003 | lingcod_model_bridging_change_ctl.R |
| 2021.s.011.005_Rec_CA_blocks | add blocks to Rec_CA catch and Q | #80 | 2021.s.011.003 | lingcod_model_bridging_change_ctl.R |
| 2021.n.011.006_fewer_recdevs | turn off recdevs prior to 1980 | #80 | 2021.n.011.005 | lingcod_model_bridging_change_ctl.R |
| 2021.s.011.006_fewer_recdevs | turn off recdevs prior to 1980 | #80 | 2021.s.011.005 | lingcod_model_bridging_change_ctl.R |
| 2021.n.011.007_DM | apply DM tuning to 011.005 models | #80 | 2021.n.011.005 | lingcod_model_bridging_change_ctl.R |
| 2021.s.011.007_DM | apply DM tuning to 011.005 models | #80 | 2021.s.011.005 | lingcod_model_bridging_change_ctl.R |
| 2021.n.011.008_Francis | apply Francis tuning to 011.005 models | 2021.n.011.005 | lingcod_model_bridging_change_ctl.R | |
| 2021.s.011.008_Francis | apply Francis tuning to 011.005 models | 2021.s.011.005 | lingcod_model_bridging_change_ctl.R | |
| 2021.s.011.010_asymptotic_FG | force fixed-gear selectivity asymptotic | 2021.s.011.008 | lingcod_model_bridging_change_ctl.R | |
| 2021.s.012.001_fewer_ages | remove the CAAL from all but WCGBTS | 2021.s.011.008 | lingcod_model_bridging_change_ctl.R, remove_ages_south.R | |
| 2021.s.012.002_fewer_ages_fix_oldM | remove the CAAL from all but WCGBTS and fix M at old value | 2021.s.012.001 | lingcod_model_bridging_change_ctl.R | |
| 2021.s.012.003_fewer_ages_wide_M_prior | remove the CAAL from all but WCGBTS and restore the original 2021 M priors | 2021.s.012.001 | lingcod_model_bridging_change_ctl.R, remove_ages_south.R | |
| 2021.s.012.004_fewer_ages_wide_M_prior_Francis | Francis tuning to model 2021.s.012.003. | 2021.s.012.001 | lingcod_model_bridging_change_ctl.R, remove_ages_south.R | |
| 2021.s.012.005_reverse_profiles | same as 12.004 but for runnig profiles in reverse | 2021.s.012.004 | lingcod_model_bridging_change_ctl.R | |
| 2021.n.014.001_esth | estimate h with prior | #83, #85 | 2021.n.011.008 | lingcod_model_bridging_change_ctl.R, esth.R |
| 2021.s.014.001_esth | estimate h with prior | #83, #85 | 2021.s.012.004 | lingcod_model_bridging_change_ctl.R, esth.R |
| 2021.s.014.010_forecast | adds a forecast to the current base model | #73 | 2021.s.014.001 | lingcod_forecast.R |
| 2021.n.014.002_marginals | sensitivity to including ages as marginals | #80, #83 | 2021.n.004.012 | lingcod_model_bridging_change_ctl.R |
| 2021.s.014.002_marginals | sensitivity to including ages as marginals | #80, #83 | 2021.s.004.012 | lingcod_model_bridging_change_ctl.R |
| 2021.n.014.003_fewer_ages | north model equivalent of 2021.s.014.001 | #80, #83 | 2021.n.004.011 | lingcod_model_bridging_change_ctl.R |
| 2021.s.014.003_fewer_ages | should be identical to 2021.s.014.001 only created with different script | #80, #83 | 2021.s.004.011 | lingcod_model_bridging_change_ctl.R |
| 2021.n.014.004_no_rec_WA_index | remove WA rec index | 2021.n.011.008 | lingcod_model_bridging_change_ctl.R | |
| 2021.n.015.001_allCAALages | Rec_WA and Rec_OR as CAAL | #80, #83 | 2021.n.004.013 | lingcod_model_bridging_change_ctl.R |
| 2021.n.015.002_allCAALages_no_rec_WA_index | rec as CAAL plus remove WA rec index | #83 | 2021.n.004.013 | lingcod_model_bridging_change_ctl.R |
| 2021.n.015.003_Francis | Francis tuning of model with all ages as CAAL | #83 | 2021.n.015.001 | lingcod_model_bridging_change_ctl.R |
| 2021.n.015.004_extraSD | turn on extraSD for Tri and float for all indices | #83 | 2021.n.015.003 | lingcod_model_bridging_change_ctl.R |
| 2021.n.016.001_tune | tune bias recruitment adjustment settings | #99 | 2021.n.015.004 | lingcod_model_bridging_change_ctl.R |
| 2021.n.017.001_no_fishery_ages | make all fishery ages ghost fleets | #87 | 2021.n.004.014 | lingcod_model_bridging_change_ctl.R |
| 2021.n.016.002_tune_sample | Run 90 of 100 from 2021.n.016.001_tune, must start from par | #99 | 2021.n.016.001 | northjittermove.R |
| 2021.s.014.101_shareM | senstivities run on 25 June 2021 | #43 | 2021.s.014.001 | run_sensitivities() |
| 2021.s.014.102_h0.7 | senstivities run on 25 June 2021 | #43 | 2021.s.014.001 | run_sensitivities() |
| 2021.s.014.103_M0.3_h0.7 | senstivities run on 25 June 2021 | #43 | 2021.s.014.001 | run_sensitivities() |
| 2021.s.014.104_sigmaR0.8 | senstivities run on 25 June 2021 | #43 | 2021.s.014.001 | run_sensitivities() |
| 2021.s.014.105_sigmaR0.4 | senstivities run on 25 June 2021 | #43 | 2021.s.014.001 | run_sensitivities() |
| 2021.s.014.303_no_fishery_indices | senstivities run on 25 June 2021 | #43 | 2021.s.014.001 | run_sensitivities() |
| 2021.s.014.321_no_fishery_indices_v2 | same as no_fishery_indices but with DebWV index removed | #43 | 2021.s.014.001 | run_sensitivities() |
| 2021.s.014.311_no_Comm_Trawl_index | senstivities run on 25 June 2021 | #43 | 2021.s.014.001 | run_sensitivities() |
| 2021.s.014.312_no_Comm_Fix_index | senstivities run on 25 June 2021 | #43 | 2021.s.014.001 | run_sensitivities() |
| 2021.s.014.313_no_Rec_WA_index | senstivities run on 25 June 2021 | #43 | 2021.s.014.001 | run_sensitivities() |
| 2021.s.014.314_no_Rec_OR_index | senstivities run on 25 June 2021 | #43 | 2021.s.014.001 | run_sensitivities() |
| 2021.s.014.315_no_Rec_CA_index | senstivities run on 25 June 2021 | #43 | 2021.s.014.001 | run_sensitivities() |
| 2021.s.014.316_no_Surv_TRI_index | senstivities run on 25 June 2021 | #43 | 2021.s.014.001 | run_sensitivities() |
| 2021.s.014.317_no_Surv_WCGBTS_index | senstivities run on 25 June 2021 | #43 | 2021.s.014.001 | run_sensitivities() |
| 2021.s.014.318_no_Surv_HookLine_index | senstivities run on 25 June 2021 | #43 | 2021.s.014.001 | run_sensitivities() |
| 2021.s.014.320_no_CPFV_DebWV_index | senstivities run on 25 June 2021 | #43 | 2021.s.014.001 | run_sensitivities() |
| 2021.n.016.003_fix_pars_on_bounds | fix some parameters that are on bounds | #99 | 2021.n.016.001 | manual edits |
| 2021.n.016.004_wider_bounds | fix some parameters that are on bounds and widen other bounds | #99 | 2021.n.016.001 | manual edits |
| 2021.n.016.005_wider_bounds_Francis | fix some parameters that are on bounds and widen other bounds | #99 | 2021.n.016.001 | manual edits |
| 2021.n.018.001_refined | scripted version of 2021.n.016.005 | #99 | 2021.n.016.001 | lingcod_model_bridging_change_ctl.R |
| 2021.n.019.001_fewer_blocks | removing a couple blocks | #99 | 2021.n.016.001 | lingcod_model_bridging_change_ctl.R |
| 2021.n.019.002_add_asymp_ret | adding parameter for asymptotic retention in the trawl fishery | #99 | 2021.n.019.001 | manual edit |
| 2021.n.019.003_tune_discard_comps | reduce the sample size of the discard comps by 50% | #99 | 2021.n.019.001 | model_tune_discard_comps.R |
| 2021.n.020.001_refined_fixed | like 2021.n.018.001_refined but with 3 sel and ret parameters fixed on bounds | #99 | 2021.n.018.001 | lingcod_model_bridging_change_ctl.R |
| 2021.n.020.010_forecast | adds a forecast to current base model | #99 | 2021.n.020.001 | lingcod_forecast.R |
| 2021.n.020.101_shareM | sensitivities run on 26 June 2021 | #99 | 2021.n.020.001 | run_sensitivities() |
| 2021.n.020.102_h0.7 | sensitivities run on 26 June 2021 | #99 | 2021.n.020.001 | run_sensitivities() |
| 2021.n.020.103_M0.3_h0.7 | sensitivities run on 26 June 2021 | #99 | 2021.n.020.001 | run_sensitivities() |
| 2021.n.020.104_sigmaR0.8 | sensitivities run on 26 June 2021 | #99 | 2021.n.020.001 | run_sensitivities() |
| 2021.n.020.105_sigmaR0.4 | sensitivities run on 26 June 2021 | #99 | 2021.n.020.001 | run_sensitivities() |
| 2021.n.020.302_OR_CPFV_index | sensitivities run on 26 June 2021 | #99 | 2021.n.020.001 | run_sensitivities() |
| 2021.n.020.303_no_fishery_indices | sensitivities run on 26 June 2021 | #99 | 2021.n.020.001 | run_sensitivities() |
| 2021.n.020.311_no_Comm_Trawl_index | sensitivities run on 26 June 2021 | #99 | 2021.n.020.001 | run_sensitivities() |
| 2021.n.020.312_no_Comm_Fix_index | sensitivities run on 26 June 2021 | #99 | 2021.n.020.001 | run_sensitivities() |
| 2021.n.020.313_no_Rec_WA_index | sensitivities run on 26 June 2021 | #99 | 2021.n.020.001 | run_sensitivities() |
| 2021.n.020.314_no_Rec_OR_index | sensitivities run on 26 June 2021 | #99 | 2021.n.020.001 | run_sensitivities() |
| 2021.n.020.315_no_Rec_CA_index | sensitivities run on 26 June 2021 | #99 | 2021.n.020.001 | run_sensitivities() |
| 2021.n.020.316_no_Surv_TRI_index | sensitivities run on 26 June 2021 | #99 | 2021.n.020.001 | run_sensitivities() |
| 2021.n.020.317_no_Surv_WCGBTS_index | sensitivities run on 26 June 2021 | #99 | 2021.n.020.001 | run_sensitivities() |
| 2021.n.020.318_no_Surv_HookLine_index | sensitivities run on 26 June 2021 | #99 | 2021.n.020.001 | run_sensitivities() |
| 2021.n.021.001_more_asymptotic | like 2021.n.020.001_refined_fixed but all asymptotic selex fixed at upper bound | NA | 2021.n.020.001 | lingcod_model_bridging_change_ctl.R, lingcod_forecast.R |
| 2021.n.021.002_more_asymptotic_manual | manual edits that match above model | NA | 2021.n.020.001 | manual edit |
| 2021.n.021.003_more_asymptotic_manual_hess | manual edits that match above model | NA | 2021.n.020.001 | manual edit |
| 2021.n.020.020_refined_fixed_jitterpar | #111 | |||
| 2021.n.022.001_new_INIT | like 2021.n.021.001 but with new initial values | #111 | 2021.n.021.001 | lingcod_model_bridging_change_ctl.R |
| 2021.s.014.201_all_CAAL_ages | comp sensitivities run on 27 June 2021 | NA | 2021.s.014.001 | run_sensitivities() |
| 2021.s.014.202_all_marg_ages | comp sensitivities run on 27 June 2021 | NA | 2021.s.014.001 | run_sensitivities() |
| 2021.s.014.206_combMF | comp sensitivities run on 27 June 2021 | NA | 2021.s.014.001 | run_sensitivities() |
| 2021.s.014.207_no_unsexed | comp sensitivities run on 27 June 2021 | NA | 2021.s.014.001 | run_sensitivities() |
| 2021.s.014.208_DM | fixed DM sensitivity | NA | 2021.s.014.001 | run_sensitivities() |
| 2021.n.022.101_shareM | north sensitivities run on 27 June 2021 | #43 | 2021.n.022.001 | run_sensitivities() |
| 2021.n.022.102_h0.7 | north sensitivities run on 27 June 2021 | #43 | 2021.n.022.001 | run_sensitivities() |
| 2021.n.022.103_M0.3_h0.7 | north sensitivities run on 27 June 2021 | #43 | 2021.n.022.001 | run_sensitivities() |
| 2021.n.022.104_sigmaR0.8 | north sensitivities run on 27 June 2021 | #43 | 2021.n.022.001 | run_sensitivities() |
| 2021.n.022.105_sigmaR0.4 | north sensitivities run on 27 June 2021 | #43 | 2021.n.022.001 | run_sensitivities() |
| 2021.n.022.204_no_fishery_ages | north sensitivities run on 27 June 2021 | #43 | 2021.n.022.001 | run_sensitivities() |
| 2021.n.022.206_combMF | north sensitivities run on 27 June 2021 | #43 | 2021.n.022.001 | run_sensitivities() |
| 2021.n.022.207_no_unsexed | north sensitivities run on 27 June 2021 | #43 | 2021.n.022.001 | run_sensitivities() |
| 2021.n.022.208_DM | fixed DM sensitivity | #43 | 2021.n.022.001 | run_sensitivities() |
| 2021.n.022.303_no_fishery_indices | north sensitivities run on 27 June 2021 | #43 | 2021.n.022.001 | run_sensitivities() |
| 2021.n.022.311_no_Comm_Trawl_index | north sensitivities run on 27 June 2021 | #43 | 2021.n.022.001 | run_sensitivities() |
| 2021.n.022.312_no_Comm_Fix_index | north sensitivities run on 27 June 2021 | #43 | 2021.n.022.001 | run_sensitivities() |
| 2021.n.022.313_no_Rec_WA_index | north sensitivities run on 27 June 2021 | #43 | 2021.n.022.001 | run_sensitivities() |
| 2021.n.022.314_no_Rec_OR_index | north sensitivities run on 27 June 2021 | #43 | 2021.n.022.001 | run_sensitivities() |
| 2021.n.022.315_no_Rec_CA_index | north sensitivities run on 27 June 2021 | #43 | 2021.n.022.001 | run_sensitivities() |
| 2021.n.022.316_no_Surv_TRI_index | north sensitivities run on 27 June 2021 | #43 | 2021.n.022.001 | run_sensitivities() |
| 2021.n.022.317_no_Surv_WCGBTS_index | north sensitivities run on 27 June 2021 | #43 | 2021.n.022.001 | run_sensitivities() |
| 2021.n.022.302_OR_CPFV_index | ran sensitivity on 8 July 2021 | #48 | 2021.n.022.001 | lingcod_model_alt_indices.R |
| 2021.s.014.301_CA_CRFSPR_index | ran sensitivity on 8 July 2021 | #48 | 2021.s.014.001 | lingcod_model_alt_indices.R |
| 2021.s.014.401_asymptotic_FG | fixed-gear fishery asymptotic | #43 | 2021.s.014.001 | run_sensitivities(), model_sensitivity_output.R |
| 2021.n.022.402_male_sel_offset | male offset sensitivity | #43 | 2021.n.022.001 | run_sensitivities(), model_sensitivity_output.R |
| 2021.s.014.402_male_sel_offset | male offset sensitivity | #43 | 2021.s.014.001 | run_sensitivities(), model_sensitivity_output.R |
| 2021.n.022.403_female_sel_offset | female offset sensitivity | #43 | 2021.n.022.001 | run_sensitivities(), model_sensitivity_output.R |
| 2021.s.014.403_female_sel_offset | female offset sensitivity | #43 | 2021.s.014.001 | run_sensitivities(), model_sensitivity_output.R |
| 2021.n.022.404_female_sel_offset | female offset sensitivity (2nd try) | #43 | 2021.n.022.001 | run_sensitivities(), model_sensitivity_output.R |
| 2021.s.014.404_female_sel_offset | female offset sensitivity (2nd try) | #43 | 2021.s.014.001 | run_sensitivities(), model_sensitivity_output.R |
| 2021.n.022.405_female_sel_offset_M0.3 | fix female M = 0.3 and add female offsets to selectivity | #43 | 2021.n.022.001 | run_sensitivities(), model_sensitivity_output.R |
| 2021.s.014.405_female_sel_offset_M0.3 | fix female M = 0.3 and add female offsets to selectivity | #43 | 2021.s.014.001 | run_sensitivities(), model_sensitivity_output.R |
| 2021.n.022.406_less_early_retention | make retention in the early period equal to the recent period | #43 | 2021.n.022.001 | run_sensitivities(), model_sensitivity_output.R |
| 2021.s.014.406_less_early_retention | make retention in the early period equal to the recent period | #43 | 2021.s.014.001 | run_sensitivities(), model_sensitivity_output.R |
| 2021.s.014.803_no_earlyDevs | remove early recdevs after starting main recdevs in 1955 | #139 | 2021.s.014.001 | lingcod_model_STAR_D1R3_recdevs.R |
| 2021.s.014.804_no_earlyDevs_biasAdj | update bias adjust values | #139 | 2021.s.014.803 | lingcod_model_STAR_D1R3_recdevs.R |
| 2021.s.014.407_female_sel_offset_flattop | STAR request 1 for south: female offsets with flat top for some fleets | #137 | 2021.n.022.001 | run_sensitivities() |
| 2021.n.022.408_female_sel_offset_flattop | STAR request 1 for north: female offsets with flat top for some fleets | #137 | 2021.s.014.001 | run_sensitivities() |
| 2021.s.014.806_recBlock_1972 | block early CA rec ending in 1972 | #143 | 2021.s.014.001 | manual edits |
| 2021.n.023.001_fixWAreccatchhistory | Fix WA rec discard in catch | #142 | 2021.n.022.001_new_INIT | model_fixWAreccatchhistory.R |
| 2021.s.014.806_esth_removecomp1975adjusted | Remove comps prior to 1975 | #143 | 2021.s.014.001_esth | manual edits |
| 2021.n.023.221_no_fixed-gear_ages | STAR request 8: remove fixed-gear ages | #145 | 2021.n.023.001 | run_sensitivites(), model_STAR_requests.R |
| 2021.n.023.222_no_fixed-gear_ages_1999-2011 | STAR request 8: remove fixed-gear ages from 1999-2011 | #145 | 2021.n.023.001 | run_sensitivites(), model_STAR_requests.R |
| 2021.n.023.223_female_sel_offset_no_fixed-gear_ages | STAR request 8: sex-specific selectivity and remove fixed-gear ages | #145 | 2021.n.023.001 | run_sensitivites(), model_STAR_requests.R |
| 2021.n.023.224_female_sel_offset_no_fixed-gear_ages_1999-2011 | STAR request 8: sex-specific selectivity and remove fixed-gear ages from 1999-2011 | #145 | 2021.n.023.001 | run_sensitivites(), model_STAR_requests.R |
| 2021.n.023.225_remove_fishery_ages_before_1990 | reverse retrospective on commercial ages | #145 | 2021.n.023.001 | run_sensitivites(), model_STAR_requests.R |
| 2021.n.023.226_remove_fishery_ages_before_2000 | reverse retrospective on commercial ages | #145 | 2021.n.023.001 | run_sensitivites(), model_STAR_requests.R |
| 2021.n.023.404_female_sel_offset | female offset sensitivity | #118 | 2021.n.023.001 | run_sensitivities(), model_STAR_requests.R |
| 2021.n.023.411_female_sel_offset_fisheries | female offset sensitivity | #118 #151 | 2021.n.023.001 | run_sensitivities(), model_STAR_requests.R |
| 2021.s.015.001_reweight | Reweight Francis weights | #146 | 2021.s.014.806_esth_removecomp1975adjusted | lingcod_model_STAR_R9_reweight.R |
| 2021.s.016.001_triextrasd | Add extra sd to Triennial | #146 | 2021.s.015.001_reweight | manual |
| 2021.s.017.001_triextrasdreweight | Tune comps | #146 | 2021.s.016.001_triextrasd | lingcod_model_STAR_R9_reweight.R |
| 2021.s.017.411_female_sel_offset_fisheries | female offset sensitivity | #118 #151 | 2021.s.017.001 | run_sensitivities(), model_STAR_requests.R |
| 2021.n.023.800_lorenzenm | Lorenzen M Age 7 | #150 | 2021.n.023.001_fixWAreccatchhistory | model_STAR_request_10.R |
| 2021.s.017.800_lorenzenm | Lorenzen M Age 7 | #150 | 2021.s.017.001_triextrasdreweight | model_STAR_request_10.R |
| 2021.n.023.801_lorenzenm | Lorenzen M Age 8 | #150 | 2021.n.023.001_fixWAreccatchhistory | model_STAR_request_10.R |
| 2021.s.017.801_lorenzenm | Lorenzen M Age 8 | #150 | 2021.s.017.001_triextrasdreweight | model_STAR_request_10.R |
| 2021.s.017.802_lorenzenm | Lorenzen M Age 8 free up Tri selectivity | #150 | 2021.s.017.801_lorenzenm | manual |
| 2021.s.017.803_lorenzenm | Lorenzen M Free Tri Slx Offset | #150 | 2021.s.017.412_female_sel_offset_fisheriesFixTriSlx | model_STAR_request_10.R |
| 2021.n.023.802_offsetLM | female offset sensitivity | #150 #151 | 2021.n.023.411_female_sel_offset_fisheries | run_sensitivities(), model_STAR_requests.R |
| 2021.n.023.901_trawl_discard_rates | actually a combinationof 902 and 904 | #155 | 2021.n.023.001_fixWAreccatchhistory | lingcod_model_STAR_R14_discard.R |
| 2021.n.023.902_discard_se | reduced standard error of discard rates for fleet1 | #155 | 2021.n.023.001_fixWAreccatchhistory | lingcod_model_STAR_R14_discard.R |
| 2021.n.023.903_trawl_rates_discard_se | less reduced se of discard rates for fleet2 than sens 901 | #155 | 2021.n.023.001_fixWAreccatchhistory | lingcod_model_STAR_R14_discard.R |
| 2021.n.023.904_sample_size | downweight sample sizes of discard lengths for fleet1 | #155 | 2021.n.023.001_fixWAreccatchhistory | lingcod_model_STAR_R14_discard.R |
| 2021.s.017.810_cutnuseDM | Tune comps with smaller input | intuition | 2021.s.017.001_triextrasdreweight | lingcod_model_STAR_R9_reweight.R |
| 2021.s.017.412_female_sel_offset_fisheriesFixTriSlx | Tri Slx Offset | #150 | 2021.s.017.411_female_sel_offset_fisheries | manual |
| 2021.n.023.413_asymptotic_TW | fix the commercial trawl selectivity to be asymptotic for all blocks | #156 | 2021.n.023.001 | run_sensitivities(), model_STAR_requests.R |
| 2021.s.017.413_asymptotic_TW | fix the commercial trawl selectivity to be asymptotic for all blocks | #156 | 2021.s.017.001 | run_sensitivities(), model_STAR_requests.R |
| 2021.n.023.414_descend_shared_across_blocks | make the descending slope of the selectivity function equal for all blocks | #156 | 2021.n.023.001 | run_sensitivities(), model_STAR_requests.R |
| 2021.s.017.414_descend_shared_across_blocks | make the descending slope of the selectivity function equal for all blocks | #156 | 2021.s.017.001 | run_sensitivities(), model_STAR_requests.R |
| 2021.n.023.415_sex_sel_descend_shared | make the descending slope of the selectivity function sex-specific and equal for all blocks | #156 | 2021.n.023.001 | run_sensitivities(), model_STAR_requests.R |
| 2021.s.017.415_sex_sel_descend_shared | make the descending slope of the selectivity function sex-specific and equal for all blocks | #156 | 2021.s.017.001 | run_sensitivities(), model_STAR_requests.R |
| 2021.n.023.416_descend_shared_rec | make the descending slope of the selectivity function equal for all blocks within the rec fleets | #156 | 2021.n.023.001 | run_sensitivities(), model_STAR_requests.R |
| 2021.s.017.416_descend_shared_rec | make the descending slope of the selectivity function equal for all blocks within the rec fleets | #156 | 2021.s.017.001 | run_sensitivities(), model_STAR_requests.R |
| 2021.n.023.417_sex_sel_descend_shared_rec | make the descending slope of the selectivity function sex-specific and equal for all blocks within the rec fleets | #156 | 2021.n.023.001 | run_sensitivities(), model_STAR_requests.R |
| 2021.s.017.417_sex_sel_descend_shared_rec | make the descending slope of the selectivity function sex-specific and equal for all blocks within the rec fleets | #156 | 2021.s.017.001 | run_sensitivities(), model_STAR_requests.R |
| 2021.n.023.418_flexible_retention | estimate the retention slope for each block | #156 | 2021.n.023.001 | manual |
| 2021.n.023.419_sex_sel_descend | make the descending slope of the selectivity function sex-specific | #156 | 2021.n.023.001 | run_sensitivities(), model_STAR_requests.R |
| 2021.s.017.419_sex_sel_descend | make the descending slope of the selectivity function sex-specific | #156 | 2021.s.017.001 | run_sensitivities(), model_STAR_requests.R |
| 2021.n.023.420_sex_sel_scale_descend_fisheries | make the scale and descending slope of the selectivity function sex-specific for fisheries only | #156 | 2021.n.023.001 | run_sensitivities(), model_STAR_requests.R |
| 2021.s.017.420_sex_sel_scale_descend_fisheries | make the scale and descending slope of the selectivity function sex-specific for fisheries only | #156 | 2021.s.017.001 | run_sensitivities(), model_STAR_requests.R |
| 2021.n.023.421_sex_sel_peak_descend_fisheries | make the peak and descending slope of the selectivity function sex-specific for fisheries only | #156 | 2021.n.023.001 | run_sensitivities(), model_STAR_requests.R |
| 2021.s.017.421_sex_sel_peak_descend_fisheries | make the peak and descending slope of the selectivity function sex-specific for fisheries only | #156 | 2021.s.017.001 | run_sensitivities(), model_STAR_requests.R |
| 2021.s.017.422_init_values | test south model sensitivity to initial values | #156 | 2021.s.017.419 | model_STAR_requests.R |
| 2021.s.017.803_lorenzenm | Lorenzen M Free Tri Slx Offset | #150 | 2021.s.017.412_female_sel_offset_fisheriesFixTriSlx | manual |
| 2021.n.023.002_tighterM | divide sd of M in half | 2021.n.023.001_fixWAreccatchhistory | ||
| 2021.n.913_discard_trawl_rates_se_tighterM | divide sd of M in half | 2021.n.023.903_trawl_rates_discard_se | ||
| 2021.n.023.423_sex_sel_descend_shared_recTighterM | divide sd of M in half | 2021.n.023.417_sex_sel_descend_shared_rec | ||
| 2021.n.023.003_fixM | fix M at the median of the prior | req 16 | 2021.n.023.001_fixWAreccatchhistory | |
| 2021.n.023.204_no_fishery_ages | remove fishery-dependent ages, all others as CAAL | req 20 | 2021.n.023.001 | run_sensitivities(), model_STAR_requests.R |
| 2021.n.023.010_forecast | adds a forecast | #99 | 2021.n.023.001 | lingcod_forecast.R |
| 2021.n.023.011_forecast_GMT | adds a forecast based on GMT input | #99 | 2021.n.023.001 | lingcod_forecast.R |
| 2021.n.023.012_forecast_1200 | adds a forecast with catches fixed at 1200 mt based on GMT input | #99 | 2021.n.023.001 | lingcod_forecast.R |
| 2021.n.023.013_forecast_Pstar40 | adds a forecast based on a Pstar = 0.40 value | #99 | 2021.n.023.001 | lingcod_forecast.R |
| 2021.s.018.001_fixTri3 | ||||
| 2021.s.018.010_forecast | adds a forecast | #99 | 2021.s.018.001 | lingcod_forecast.R |
| 2021.s.018.011_forecast_GMT | adds a forecast based on GMT input | #99 | 2021.s.018.001 | lingcod_forecast.R |
| 2021.s.018.026_low | low state of nature | 2021.s.018.001 | ||
| 2021.s.018.036_high | high state of nature | 2021.s.018.001 | ||
| 2021.n.023.021_low_state1_ACL | low state 1 with ACL catch from base model | #154 | 2021.n.023.420 | |
| 2021.n.023.022_low_state2_ACL | low state 2 with ACL catch from base model | #154 | 2021.n.023.003 | |
| 2021.n.023.024_low_state_GMT_ACL | low state with ACL catch from base model with GMT input | #154 | 2021.n.023.420 | |
| 2021.n.023.031_high_state_ACL | high state with ACL catch from base model | #154 | 2021.n.023.204 | |
| 2021.n.023.033_high_state_GMT_ACL | high state with ACL catch from base model with GMT input | #154 | 2021.n.023.204 | |
| 2021.s.018.901_phase1rec | Change rec dev phase to 1 to match North | 2021.s.018.001_fixTri3 | ||
| 2021.s.018.902_phase1recdiffinit | Try a lower INIT for M | 2021.s.018.901_phase1rec | ||
| 2021.n.023.032_high_state_1200 | high state with constant catch of 1200 from GMT. Forecast copied from 2021.n.023.012_forecast_1200 | 2021.n.023.031 | ||
| 2021.n.023.023_low_state1_1200 | low state 1 with constant catch of 1200 from GMT. Forecast copied from 2021.n.023.012_forecast_1200 | 2021.n.023.021 | ||
| 2021.n.023.611_low_stream_1 | forecasts on July 21 | #154 | 2021.n.023.010 | lingcod_forecast.R, model_decsion_tables.R |
| 2021.n.023.621_base_stream_1 | forecasts on July 21 | #154 | 2021.n.023.010 | lingcod_forecast.R, model_decsion_tables.R |
| 2021.n.023.631_high_stream_1 | forecasts on July 21 | #154 | 2021.n.023.010 | lingcod_forecast.R, model_decsion_tables.R |
| 2021.n.023.612_low_stream_2 | forecasts on July 21 | #154 | 2021.n.023.010 | lingcod_forecast.R, model_decsion_tables.R |
| 2021.n.023.622_base_stream_2 | forecasts on July 21 | #154 | 2021.n.023.010 | lingcod_forecast.R, model_decsion_tables.R |
| 2021.n.023.632_high_stream_2 | forecasts on July 21 | #154 | 2021.n.023.010 | lingcod_forecast.R, model_decsion_tables.R |
| 2021.n.023.613_low_stream_3 | forecasts on July 21 | #154 | 2021.n.023.010 | lingcod_forecast.R, model_decsion_tables.R |
| 2021.n.023.623_base_stream_3 | forecasts on July 21 | #154 | 2021.n.023.010 | lingcod_forecast.R, model_decsion_tables.R |
| 2021.n.023.633_high_stream_3 | forecasts on July 21 | #154 | 2021.n.023.010 | lingcod_forecast.R, model_decsion_tables.R |
| 2021.s.018.611_low_stream_1 | forecasts on July 21 | #154 | 2021.s.018.010 | lingcod_forecast.R, model_decsion_tables.R |
| 2021.s.018.621_base_stream_1 | forecasts on July 21 | #154 | 2021.s.018.010 | lingcod_forecast.R, model_decsion_tables.R |
| 2021.s.018.631_high_stream_1 | forecasts on July 21 | #154 | 2021.s.018.010 | lingcod_forecast.R, model_decsion_tables.R |
| 2021.s.018.612_low_stream_2 | forecasts on July 21 | #154 | 2021.s.018.010 | lingcod_forecast.R, model_decsion_tables.R |
| 2021.s.018.622_base_stream_2 | forecasts on July 21 | #154 | 2021.s.018.010 | lingcod_forecast.R, model_decsion_tables.R |
| 2021.s.018.632_high_stream_2 | forecasts on July 21 | #154 | 2021.s.018.010 | lingcod_forecast.R, model_decsion_tables.R |
| 2021.s.018.613_low_stream_3 | forecasts on July 21 | #154 | 2021.s.018.010 | lingcod_forecast.R, model_decsion_tables.R |
| 2021.s.018.623_base_stream_3 | forecasts on July 21 | #154 | 2021.s.018.010 | lingcod_forecast.R, model_decsion_tables.R |
| 2021.s.018.633_high_stream_3 | forecasts on July 21 | #154 | 2021.s.018.010 | lingcod_forecast.R, model_decsion_tables.R |
| 2021.n.023.629_forecast_no4010 | like 623_base_stream_3 forecast but without 40:10 adjustment | 2021.n.023.623 | lingcod_forecast_extras.R | |
| 2021.s.018.629_forecast_no4010 | like 623_base_stream_3 forecast but without 40:10 adjustment | 2021.s.018.623 | lingcod_forecast_extras.R | |
| 2021.s.018.101_shareM | post-STAR south sensitivities | #175 | 2021.s.018.001 | model_sensitivity_output.R, run_sensitivities() |
| 2021.s.018.102_h0.7 | post-STAR south sensitivities | #175 | 2021.s.018.001 | model_sensitivity_output.R, run_sensitivities() |
| 2021.s.018.103_M0.3_h0.7 | post-STAR south sensitivities | #175 | 2021.s.018.001 | model_sensitivity_output.R, run_sensitivities() |
| 2021.s.018.104_sigmaR0.8 | post-STAR south sensitivities | #175 | 2021.s.018.001 | model_sensitivity_output.R, run_sensitivities() |
| 2021.s.018.105_sigmaR0.4 | post-STAR south sensitivities | #175 | 2021.s.018.001 | model_sensitivity_output.R, run_sensitivities() |
| 2021.s.018.106_M0.3 | post-STAR south sensitivities | #175 | 2021.s.018.001 | model_sensitivity_output.R, run_sensitivities() |
| 2021.s.018.201_all_CAAL_ages | post-STAR south sensitivities | #175 | 2021.s.018.001 | model_sensitivity_output.R, run_sensitivities() |
| 2021.s.018.202_all_marg_ages | post-STAR south sensitivities | #175 | 2021.s.018.001 | model_sensitivity_output.R, run_sensitivities() |
| 2021.s.018.203_some_CAAL_ages | post-STAR south sensitivities | #175 | 2021.s.018.001 | model_sensitivity_output.R, run_sensitivities() |
| 2021.s.018.206_combMF | post-STAR south sensitivities | #175 | 2021.s.018.001 | model_sensitivity_output.R, run_sensitivities() |
| 2021.s.018.207_no_unsexed | post-STAR south sensitivities | #175 | 2021.s.018.001 | model_sensitivity_output.R, run_sensitivities() |
| 2021.s.018.208_DM | post-STAR south sensitivities | #175 | 2021.s.018.001 | model_sensitivity_output.R, run_sensitivities() |
| 2021.s.018.301_CA_CRFSPR_index | post-STAR south sensitivities | #175 | 2021.s.018.001 | model_sensitivity_output.R, run_sensitivities() |
| 2021.s.018.303_no_fishery_indices | post-STAR south sensitivities | #175 | 2021.s.018.001 | model_sensitivity_output.R, run_sensitivities() |
| 2021.s.018.311_no_Comm_Trawl_index | post-STAR south sensitivities | #175 | 2021.s.018.001 | model_sensitivity_output.R, run_sensitivities() |
| 2021.s.018.315_no_Rec_CA_index | post-STAR south sensitivities | #175 | 2021.s.018.001 | model_sensitivity_output.R, run_sensitivities() |
| 2021.s.018.316_no_Surv_TRI_index | post-STAR south sensitivities | #175 | 2021.s.018.001 | model_sensitivity_output.R, run_sensitivities() |
| 2021.s.018.317_no_Surv_WCGBTS_index | post-STAR south sensitivities | #175 | 2021.s.018.001 | model_sensitivity_output.R, run_sensitivities() |
| 2021.s.018.318_no_Surv_HookLine_index | post-STAR south sensitivities | #175 | 2021.s.018.001 | model_sensitivity_output.R, run_sensitivities() |
| 2021.s.018.320_no_CPFV_DebWV_index | post-STAR south sensitivities | #175 | 2021.s.018.001 | model_sensitivity_output.R, run_sensitivities() |
| 2021.s.018.321_no_fishery_indices_v2 | post-STAR south sensitivities | #175 | 2021.s.018.001 | model_sensitivity_output.R, run_sensitivities() |
| 2021.s.018.401_asymptotic_FG | post-STAR south sensitivities | #175 | 2021.s.018.001 | model_sensitivity_output.R, run_sensitivities() |
| 2021.s.018.404_female_sel_offset | post-STAR south sensitivities | #175 | 2021.s.018.001 | model_sensitivity_output.R, run_sensitivities() |
| 2021.s.018.405_female_sel_offset_M0.3 | post-STAR south sensitivities | #175 | 2021.s.018.001 | model_sensitivity_output.R, run_sensitivities() |
| 2021.s.018.406_less_early_retention | post-STAR south sensitivities | #175 | 2021.s.018.001 | model_sensitivity_output.R, run_sensitivities() |
| 2021.n.023.101_shareM | post-STAR north sensitivities | #175 | 2021.n.023.001 | model_sensitivity_output.R, run_sensitivities() |
| 2021.n.023.102_h0.7 | post-STAR north sensitivities | #175 | 2021.n.023.001 | model_sensitivity_output.R, run_sensitivities() |
| 2021.n.023.103_M0.3_h0.7 | post-STAR north sensitivities | #175 | 2021.n.023.001 | model_sensitivity_output.R, run_sensitivities() |
| 2021.n.023.104_sigmaR0.8 | post-STAR north sensitivities | #175 | 2021.n.023.001 | model_sensitivity_output.R, run_sensitivities() |
| 2021.n.023.105_sigmaR0.4 | post-STAR north sensitivities | #175 | 2021.n.023.001 | model_sensitivity_output.R, run_sensitivities() |
| 2021.n.023.106_M0.3 | post-STAR north sensitivities | #175 | 2021.n.023.001 | model_sensitivity_output.R, run_sensitivities() |
| 2021.n.023.206_combMF | post-STAR north sensitivities | #175 | 2021.n.023.001 | model_sensitivity_output.R, run_sensitivities() |
| 2021.n.023.207_no_unsexed | post-STAR north sensitivities | #175 | 2021.n.023.001 | model_sensitivity_output.R, run_sensitivities() |
| 2021.n.023.208_DM | post-STAR north sensitivities | #175 | 2021.n.023.001 | model_sensitivity_output.R, run_sensitivities() |
| 2021.n.023.209_no_fishery_ages_DM | post-STAR north sensitivities | #175 | 2021.n.023.001 | model_sensitivity_output.R, run_sensitivities() |
| 2021.n.023.225_remove_fishery_ages_before_1990 | post-STAR north sensitivities | #175 | 2021.n.023.001 | model_sensitivity_output.R, run_sensitivities() |
| 2021.n.023.226_remove_fishery_ages_before_2000 | post-STAR north sensitivities | #175 | 2021.n.023.001 | model_sensitivity_output.R, run_sensitivities() |
| 2021.n.023.302_OR_CPFV_index | post-STAR north sensitivities | #175 | 2021.n.023.001 | model_sensitivity_output.R, run_sensitivities() |
| 2021.n.023.303_no_fishery_indices | post-STAR north sensitivities | #175 | 2021.n.023.001 | model_sensitivity_output.R, run_sensitivities() |
| 2021.n.023.311_no_Comm_Trawl_index | post-STAR north sensitivities | #175 | 2021.n.023.001 | model_sensitivity_output.R, run_sensitivities() |
| 2021.n.023.312_no_Comm_Fix_index | post-STAR north sensitivities | #175 | 2021.n.023.001 | model_sensitivity_output.R, run_sensitivities() |
| 2021.n.023.313_no_Rec_WA_index | post-STAR north sensitivities | #175 | 2021.n.023.001 | model_sensitivity_output.R, run_sensitivities() |
| 2021.n.023.314_no_Rec_OR_index | post-STAR north sensitivities | #175 | 2021.n.023.001 | model_sensitivity_output.R, run_sensitivities() |
| 2021.n.023.315_no_Rec_CA_index | post-STAR north sensitivities | #175 | 2021.n.023.001 | model_sensitivity_output.R, run_sensitivities() |
| 2021.n.023.316_no_Surv_TRI_index | post-STAR north sensitivities | #175 | 2021.n.023.001 | model_sensitivity_output.R, run_sensitivities() |
| 2021.n.023.317_no_Surv_WCGBTS_index | post-STAR north sensitivities | #175 | 2021.n.023.001 | model_sensitivity_output.R, run_sensitivities() |
| 2021.n.023.321_no_fishery_indices_v2 | post-STAR north sensitivities | #175 | 2021.n.023.001 | model_sensitivity_output.R, run_sensitivities() |
| 2021.n.023.405_female_sel_offset_M0.3 | post-STAR north sensitivities | #175 | 2021.n.023.001 | model_sensitivity_output.R, run_sensitivities() |
| 2021.n.023.406_less_early_retention | post-STAR north sensitivities | #175 | 2021.n.023.001 | model_sensitivity_output.R, run_sensitivities() |