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Would you please recommend the best practice to address the +1 problem using GDS, e.g. adding new samples incrementally by small batches. For example, our starting batch can be a biobank scale dataset, e.g. UKB, and we are able to convert a pVCF to a GDS. When we want to add new samples, SeqMerge function will do, however it needs to generate a new file object, and the storage space will be doubled at least (temporarily), is there a way to avoid this by appending the new samples to the existing GDS directly? Please share your advice and guidance on this.
Best wishes,
Fengyuan
The text was updated successfully, but these errors were encountered:
Dear @zhengxwen ,
hope you are keeping well.
Would you please recommend the best practice to address the +1 problem using GDS, e.g. adding new samples incrementally by small batches. For example, our starting batch can be a biobank scale dataset, e.g. UKB, and we are able to convert a pVCF to a GDS. When we want to add new samples, SeqMerge function will do, however it needs to generate a new file object, and the storage space will be doubled at least (temporarily), is there a way to avoid this by appending the new samples to the existing GDS directly? Please share your advice and guidance on this.
Best wishes,
Fengyuan
The text was updated successfully, but these errors were encountered: