Merge pull request #294 from AaltoSciComp/radovan/productivity-tools

rewrite of the "productivity tools" episode

content/productivity.md

@@ -0,0 +1,188 @@
+# Productivity tools
+
+:::{objectives}
+- Know about tools that can help you **spot code problems** and help you following
+  a **consistent code style** without you having to do it manually.
+- Get an overview of **AI-based tools** and how they can help you
+  writing code.
+:::
+
+:::{instructor-note}
+- Demo/discussion: 20 min
+:::
+
+
+## Linters and formatters
+
+**Linter**: Tool that analyzes source code to detect potential errors, unused
+imports, unused variables, code style violations, and to improve readability.
+- Popular linters:
+  - [Autoflake](https://pypi.org/project/autoflake/)
+  - [Flake8](https://flake8.pycqa.org/)
+  - [Pyflakes](https://pypi.org/project/pyflakes/)
+  - [Pycodestyle](https://pycodestyle.pycqa.org/)
+  - [Pylint](https://pylint.readthedocs.io/)
+  - [Ruff](https://docs.astral.sh/ruff/)
+
+**Formatter**: Tool that automatically formats your code to a consistent style,
+for instance following [PEP 8](https://peps.python.org/pep-0008/).
+
+- Popular formatters:
+  - [Black](https://black.readthedocs.io/)
+  - [YAPF](https://github.com/google/yapf)
+  - [Ruff](https://docs.astral.sh/ruff/)
+
+In this course we will focus on [Ruff](https://docs.astral.sh/ruff/) since it
+can do **both checking and formatting** and you don't have to switch between
+multiple tools.
+
+:::{discussion} Linters and formatters can be configured to your liking
+These tools typically have good defaults. But if you don't like the defaults,
+you can configure what they should ignore or how they should format or not format.
+:::
+
+
+## Examples
+
+This code example (which we possibly recognize from the previous section about
+{ref}`profiling`)
+has few problems (highlighted):
+```{code-block} python
+---
+emphasize-lines: 2, 7, 10
+---
+import re
+import requests
+
+
+def count_unique_words(file_path: str) -> int:
+    unique_words = set()
+    forgotten_variable = 13
+    with open(file_path, "r", encoding="utf-8") as file:
+        for line in file:
+            words = re.findall(r"\b\w+\b", line.lower()))
+            for word in words:
+                unique_words.add(word)
+    return len(unique_words)
+```
+
+Please try whether you can locate these problems using Ruff:
+```console
+$ ruff check
+```
+
+Next, let us try to auto-format a code example which is badly formatted and also difficult
+to read:
+:::::{tabs}
+  ::::{tab} Badly formatted
+  ```python
+  import re
+  def  count_unique_words (file_path : str)->int:
+    unique_words=set()
+    with open(file_path,"r",encoding="utf-8") as file:
+      for line in file:
+        words=re.findall(r"\b\w+\b",line.lower())
+        for word in words:
+          unique_words.add(word)
+    return len(   unique_words   )
+  ```
+  ::::
+
+  ::::{tab} Auto-formatted
+  ```python
+  import re
+
+
+  def count_unique_words(file_path: str) -> int:
+      unique_words = set()
+      with open(file_path, "r", encoding="utf-8") as file:
+          for line in file:
+              words = re.findall(r"\b\w+\b", line.lower())
+              for word in words:
+                  unique_words.add(word)
+      return len(unique_words)
+  ```
+
+  This was done using:
+  ```console
+  $ ruff format
+  ```
+  ::::
+:::::
+
+
+## Type checking
+
+A (static) type checker is a tool that checks whether the types of variables in your
+code match the types that you have specified.
+- Tools:
+  - [Mypy](https://mypy.readthedocs.io/)
+  - [Pyright](https://github.com/microsoft/pyright) (Microsoft)
+  - [Pyre](https://pyre-check.org/) (Meta)
+
+
+## Integration with editors
+
+Many/most of the above tools can be integrated with your editor.  For instance,
+you can configure your editor to automatically format your code when you save
+the file. However, this only makes sense when all team members agree to follow
+the same style, otherwise saving and possibly committing changes to version
+control will show up changes to code written by others which you possibly
+didn't intend to make.
+
+
+## Integration with Jupyter notebooks
+
+It is possible to automatically format your code in Jupyter notebooks!
+For this to work you need
+the following three dependencies installed:
+- `jupyterlab-code-formatter`
+- `black`
+- `isort`
+
+More information and a screen-cast of how this works can be found at
+<https://jupyterlab-code-formatter.readthedocs.io/>.
+
+
+## Integration with version control
+
+If you use version control and like to have your code checked or formatted
+**before you commit the change**, you can use tools like [pre-commit](https://pre-commit.com/).
+
+
+## AI-assisted coding
+
+We can use AI as an assistant/apprentice:
+- Code completion
+- Write a test based on an implementation
+- Write an implementation based on a test
+
+Or we can use AI as a mentor:
+- Explain a concept
+- Improve code
+- Show a different (possibly better) way of implementing the same thing
+
+
+:::{figure} productivity/chatgpt.png
+:alt: Screenshot of ChatGPT
+:width: 100%
+
+Example for using a chat-based AI tool.
+:::
+
+:::{figure} productivity/code-completion.gif
+:alt: Screen-cast of working with GitHub Copilot
+:width: 100%
+
+Example for using AI to complete code in an editor.
+:::
+
+:::{admonition} AI tools open up a box of questions
+- Legal
+- Ethical
+- Privacy
+- Lock-in/ monopolies
+- Lack of diversity
+- Will we still need to learn programming?
+- How will it affect learning and teaching programming?
+:::