Update FAQ for samples with missing cell type reports #307
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
Since we are removing any libraries that have < 2 cells, the second bullet point in this FAQ no longer applies. Even if there's between 2-30 cells, the report and annotations will be present for SingleR and then CellAssign will say "Not run". We indicate this in the SCE contents section so I don't think we need those specifics here.
I updated this to just mention when cell type annotations aren't present at all which would be cell lines.