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Merge Main into Development - Includes fix for updated multiplexed download image #344

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merged 4 commits into from
Aug 15, 2024
Merged

Merge Main into Development - Includes fix for updated multiplexed download image #344

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f7238a8
swap image for corrected file name
davidsmejia Aug 15, 2024
6d95008
bump up multiplexed folder image to 750
davidsmejia Aug 15, 2024
ac4b1a0
resize image to 1200x
davidsmejia Aug 15, 2024
b1ebfc6
Merge pull request #343 from AlexsLemonade/davidsmejia/hotfix-multipl…
davidsmejia Aug 15, 2024
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2 changes: 1 addition & 1 deletion docs/download_files.md
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Expand Up @@ -178,7 +178,7 @@ For project downloads, the counts and QC files will be organized by the _set_ of
These sample set folders are named with an underscore-separated list of the sample ids for the libraries within, _e.g._, `SCPCS999990_SCPCS999991_SCPCS999992`.
Bulk RNA-seq data, if present, will follow the [same format as bulk RNA-seq for single-sample libraries](#download-folder-structure-for-project-downloads).

![multiplexed project download folder](images/multiplexed-download-folder.png){width="600"}
![multiplexed project download folder](images/multiplexed-download-folder.png){width="750"}

Because we do not perform demultiplexing to separate cells from multiplexed libraries into sample-specific count matrices, sample downloads from a project with multiplexed data will include all libraries that contain the sample of interest, but these libraries _will still contain cells from other samples_.

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Binary file modified docs/images/multiplexed-download-folder.png
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