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Feature/clustering #801

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Feature/clustering #801

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farznaj
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@farznaj farznaj commented Feb 22, 2022

merging my branch (which is already up to date with master) with master.

Farzaneh Najafi and others added 30 commits June 16, 2020 18:53
…pth has issues; adding depth/area color coding to scatter plots
…se them for umap analysis; also removing all checkpoint files.
…opying them, neuropil subtraction, dff computation
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@matchings matchings left a comment

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@farznaj I am not comfortable adding this entire PR into master. It will make the repo much larger and more cluttered than it already is.

Can you just add the code used for platform paper analysis, in visual_behavior/decoding_population?

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