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Issues list

Intermediate file compression and/or storage utilization forecasting enhancement New feature or request
#103 opened Oct 14, 2024 by joaobilro
Alignment process is failing bug Something isn't working
#102 opened Sep 10, 2024 by mliannholland
singularity container support enhancement New feature or request
#99 opened Mar 19, 2024 by mliannholland
1
External Species Tree and AleRax enhancement New feature or request
#98 opened Mar 13, 2024 by Alexggo
1
Error executing process > 'NOVELTREE:INPUT_CHECK:SAMPLESHEET_CHECK (tsar_downsamp_test_samplesheet.csv)' bug Something isn't working
#96 opened Nov 13, 2023 by bioinfowheat
1
Implement AleRax enhancement New feature or request
#93 opened Oct 8, 2023 by austinhpatton
Stage fasta files to match samplesheet species names enhancement New feature or request
#92 opened Oct 7, 2023 by austinhpatton
Dynamic scaling of compute specifications for GeneRax enhancement New feature or request
#90 opened Oct 4, 2023 by austinhpatton
Implement WITCH-NG enhancement New feature or request
#89 opened Oct 4, 2023 by austinhpatton
Replace BUSCO with compleasm (as default) enhancement New feature or request
#88 opened Oct 2, 2023 by austinhpatton
Build in key workflow output summarization features to wokflow enhancement New feature or request
#87 opened Oct 2, 2023 by austinhpatton
resolve use of "none" vs null as parameters enhancement New feature or request
#76 opened Aug 3, 2023 by austinhpatton
Not all Uniprot annotations are downloaded... bug Something isn't working
#74 opened Jul 13, 2023 by mezarque
Subworkflow to look for long-range HGT enhancement New feature or request
#73 opened Apr 27, 2023 by austinhpatton
Use GitHub actions to build and publish Docker images enhancement New feature or request
#44 opened Feb 13, 2023 by mertcelebi
Update Docker base images and optimize size enhancement New feature or request
#43 opened Feb 13, 2023 by mertcelebi
Handling of compressed inputs enhancement New feature or request
#26 opened Jan 3, 2023 by austinhpatton
Using subworkflows more to clean-up the mcl_test vs complete separation. enhancement New feature or request
#9 opened Dec 15, 2022 by mertcelebi
Validation of input species counts and more meaningful error messages enhancement New feature or request
#8 opened Dec 15, 2022 by mertcelebi
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