Add links to published J Chem Ed teaching articles

source/teach/index.md

@@ -8,45 +8,92 @@ This section is in the process of being migrated from the original Avogadro docu
 
 Avogadro is intended not only for molecular modeling research, but also for educational use. This category is intended to help educators around the world find lessons and tips for using Avogadro 2 in teaching chemistry. If you have an exercise or article that you would like to list here, please get in touch via [Avogadro Discussion](https://discuss.avogadro.cc).
 
-[1,3-diaxial interactions](diaxial_interactions)
+## Publications
 
-Investigate steric interactions in cyclohexane derivatives.
+A variety of activities and resources using Avogadro have been published in journals such as *J. Chem. Ed.*
 
-[Alkene Isomers](alkene_isomers)
+### Computational Chemistry:
 
-Investigate the stability of alkene isomers due to steric interactions.
+* [Computational Chemistry Activities with Avogadro and ORCA](https://doi.org/10.1021/acs.jchemed.0c00959)
+* [$\ce{Ph2Te2}$: An Accessible Main Group Organometallic Target for Spectral Characterization and Modeling](https://doi.org/10.1021/acs.jchemed.2c01039)
+* [$\ce{Cp2TiCl2}$: Synthesis, Characterization, Modeling and Catalysis](https://doi.org/10.1021/acs.jchemed.1c01272)
+* [A Computational Chemistry Course for Teachers: From Research Laboratories to High-School Chemistry Teaching](https://doi.org/10.1021/acs.jchemed.3c00645)
+* [Antioxidant Potential of Anthocyanidins: A *Healthy* Computational Activity for High School and Undergraduate Students](https://doi.org/10.1021/acs.jchemed.2c01070)
 
-[Basic VSEPR](basic_vsepr)
+### Spectra / Spectroscopy:
 
-Investigate molecular geometries using VSEPR rules.
+* [Computation of Chemical Shifts for Paramagnetic Molecules: A Laboratory Experiment for the Undergraduate Curriculum](https://doi.org/10.1021/ed400902c) 
+* [Computational Modeling of the Optical Rotation of Amino Acids: An ‘in Silico’ Experiment for Physical Chemistry](https://doi.org/10.1021/ed300680g)
 
-[HCN dipole](hcn_dipole)
+### Chemical Reactions and Mechanisms:
 
-Investigate polar intermolecular interactions using HCN.
+* [Investigating first-year undergraduate chemistry students’ reasoning with reaction coordinate diagrams when choosing among particulate-level reaction mechanisms](https://doi.org/10.1039/D0RP00193G) 
 
-[Hydrogen Clusters](hydrogen_clusters)
+### Materials / Nano:
 
-Investigate the intermolecular interactions of solid hydrogen.
+* [Think Outside the Lab: Modeling Graphene Quantum Dots in Pandemic Times](https://doi.org/10.1021/acs.jchemed.1c00879)
+* [Extended Hückel Calculations on Solids Using the Avogadro Molecular Editor and Visualizer](https://pubs.acs.org/doi/full/10.1021/acs.jchemed.7b00698)
+* [A Computational Experiment on Single-Walled Carbon Nanotubes](https://doi.org/10.1021/ed3006067)
+* [The Computational Design of Two-Dimensional Materials](https://doi.org/10.1021/acs.jchemed.9b00485)
 
-[Hydrogen Molecule](hydrogen_molecule)
+### Cheminformatics:
 
-Investigate the hydrogen molecule and its bond length using different force fields.
+* [Possibilities and Challenges of Using Educational Cheminformatics for STEM Education: A SWOT Analysis of a Molecular Visualization Engineering Project](https://doi.org/10.1021/acs.jchemed.1c00683)
+* [Basic Cheminformatics Course for First-Year Chemistry Students](https://doi.org/10.1021/acs.jchemed.2c00175)
 
-[Markovnikov's Rule](markovnikovs_rule)
+### 3D Printing and VR:
 
-Investigate the stability of reactions using Markovnikov's rule.
+* [Accessible 3D Printing: Multicolor Molecular Models from Consumer-Grade, Single Filament 3D Printers](https://doi.org/10.1021/acs.jchemed.3c00686)
+* [A Simplified Method for the 3D Printing of Molecular Models for Chemical Education](https://doi.org/10.1021/acs.jchemed.7b00533)
+* [Development and Evaluation of the H NMR MoleculAR Application](https://doi.org/10.1021/acs.jchemed.0c01068)
 
-[Organic Hybridization](organic_hybridization)
+### Remote Teaching:
 
-Illustrate the geometry and bond lengths in sp<sup>3</sup>, sp<sup>2</sup> and sp hybridized carbons.
+* [Strategies, Practice and Lessons Learned from Remote Teaching of the General Chemistry Laboratory Course at Brown University](https://doi.org/10.1021/acs.jchemed.0c00746)
 
-[Water](water)
+## Activities
 
-Investigate the geometry of water and hydrogen bonding between molecules.
+Beyond published articles, we include a variety of activities contributed by the Avogadro community.
 
-[Acid-Base Properties of Amino Acids](acid_base)
+[*1,3-diaxial interactions*](diaxial_interactions)
 
-Investigate the pH-dependent protonation of amino acids.
+* Investigate steric interactions in cyclohexane derivatives.
+
+[*Alkene Isomers*](alkene_isomers)
+
+* Investigate the stability of alkene isomers due to steric interactions.
+
+[*Basic VSEPR*](basic_vsepr)
+
+* Investigate molecular geometries using VSEPR rules.
+
+[*HCN dipole*](hcn_dipole)
+
+* Investigate polar intermolecular interactions using HCN.
+
+[*Hydrogen Clusters*](hydrogen_clusters)
+
+* Investigate the intermolecular interactions of solid hydrogen.
+
+[*Hydrogen Molecule*](hydrogen_molecule)
+
+* Investigate the hydrogen molecule and its bond length using different force fields.
+
+[*Markovnikov's Rule*](markovnikovs_rule)
+
+* Investigate the stability of reactions using Markovnikov's rule.
+
+[*Organic Hybridization*](organic_hybridization)
+
+* Illustrate the geometry and bond lengths in sp<sup>3</sup>, sp<sup>2</sup> and sp hybridized carbons.
+
+[*Water*](water)
+
+* Investigate the geometry of water and hydrogen bonding between molecules.
+
+[*Acid-Base Properties of Amino Acids*](acid_base)
+
+* Investigate the pH-dependent protonation of amino acids.
 
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