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20 Open 183 Closed
20 Open 183 Closed
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Issues list

Unable to build clustering annotation from the command line
#207 opened Sep 5, 2024 by ycaspi257
@mikekucera
13
autoannotate-1.5.1-SNAPSHOT: Cytoscape freezes when I play with AA parameters (Annotation Display)
#206 opened May 15, 2024 by veroniquevoisin
Color EM nodes according to cluster enhancement
#205 opened Apr 3, 2024 by mikekucera
still get the double annotation when I try to move an annotation
#198 opened Jan 31, 2024 by veroniquevoisin
2
Upgrade Java and Guice
#195 opened Jul 25, 2023 by mikekucera
Better Labels for clusters
#189 opened Jun 9, 2023 by mikekucera
1
Ellipses duplicated when a cluster is moved
#187 opened Mar 14, 2023 by veroniquevoisin 1.5
2
post analysis edges + annotations very buggy - loosing nodes from the main network, randomly creating duplicates of nodes bug
#166 opened Apr 19, 2021 by risserlin 1.4.0
@mikekucera
10
AA collapse all clusters a bunch of nodes together in one spot bug
#159 opened Jan 5, 2021 by risserlin 1.3.4
@mikekucera
AA collapsed mode: adjust node size?
#116 opened Jan 9, 2018 by veroniquevoisin
Re-collapse gives error bug
#105 opened Jul 26, 2017 by risserlin
label order sometimes different for cyrest command and summary network bug
#86 opened Apr 13, 2017 by risserlin
@mikekucera
open previously saved session and collapse all without selecting anything issues bug
#67 opened Jun 23, 2016 by risserlin
2
AA freezes with collapsed network bug cytoscape-bug
#66 opened Jun 23, 2016 by risserlin
save autoannotated collapsed network barfs cytoscape-bug
#56 opened May 30, 2016 by risserlin
@mikekucera
3
get error sometimes after collapsing annotations and try to redo layout cytoscape-bug
#54 opened May 25, 2016 by risserlin
@mikekucera
1
Instead of labels annotate groups with wordclouds enhancement
#53 opened May 25, 2016 by risserlin
@mikekucera
create subnetwork from AA collapsed network adds all nodes as well as groups cytoscape-bug
#52 opened May 25, 2016 by risserlin
@mikekucera
3
Modify the shape of a subset of annotations enhancement
#39 opened Feb 26, 2016 by risserlin
@mikekucera
1
Collapsing does not work well when clusters overlap enhancement
#26 opened Feb 3, 2016 by mikekucera
ProTip! What’s not been updated in a month: updated:<2024-10-28.