Blacken

[orbeckst]

fix #246

[codecov]

Codecov Report

Merging #247 (e96eae0) into main (3653164) will increase coverage by 0.00%.
The diff coverage is 65.68%.

@@           Coverage Diff           @@
##             main     #247   +/-   ##
=======================================
  Coverage   66.49%   66.49%           
=======================================
  Files          23       23           
  Lines        4325     4355   +30     
  Branches      739      757   +18     
=======================================
+ Hits         2876     2896   +20     
- Misses       1256     1261    +5     
- Partials      193      198    +5     

Files Changed	Coverage Δ
gromacs/fileformats/__init__.py	100.00% <ø> (ø)
gromacs/formats.py	100.00% <ø> (ø)
setup.py	34.97% <ø> (ø)
gromacs/cbook.py	27.60% <24.82%> (ø)
gromacs/fileformats/convert.py	59.09% <27.77%> (ø)
gromacs/qsub.py	68.96% <48.14%> (ø)
gromacs/run.py	68.70% <57.14%> (ø)
gromacs/core.py	71.48% <57.69%> (ø)
gromacs/__init__.py	72.72% <58.33%> (ø)
gromacs/fileformats/blocks.py	70.96% <59.39%> (ø)
... and 13 more

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[orbeckst]

The blackening broke something (the current main branch does not show this error):

gromacs/core.py:286: UnicodeDecodeError
________ test_to_unicode[\xc3\x85ngstr\xc3\xb6m-\xc3\x85ngstr\xc3\xb6m] ________

s = '\xc3\x85ngstr\xc3\xb6m', expected = '\xc3\x85ngstr\xc3\xb6m'

    @pytest.mark.parametrize(
        "s,expected",
        [
            (100, 100),
            ("Jabberwock", "Jabberwock"),
            ("Ångström", "Ångström"),
        ],
    )
    def test_to_unicode(s, expected):
>       output = convert.to_unicode(s)

tests/fileformats/test_convert.py:24: 
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 

obj = '\xc3\x85ngstr\xc3\xb6m'

    def to_unicode(obj):
        """Convert obj to unicode (if it can be be converted).
    
        Conversion is only attempted if `obj` is a string type (as
        determined by :data:`six.string_types`).
    
        .. versionchanged:: 0.7.0
           removed *encoding* keyword argument
    
        """
        if not isinstance(obj, six.string_types):
            return obj
    
        try:
>           obj = six.text_type(obj)
E           UnicodeDecodeError: 'ascii' codec can't decode byte 0xc3 in position 0: ordinal not in range(128)

gromacs/fileformats/convert.py:60: UnicodeDecodeError

[orbeckst]

macOS mamba seems currently broken (see #253 ) and I made it non-mandatory status check.

[orbeckst]

Mamba is fixed.

[orbeckst]

black removed Python 2.7 essential unicode string prefixes in the tests.