Build Singularity images #3203
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| name: Build Singularity images | |
| on: | |
| push: | |
| branches: | |
| - master | |
| schedule: | |
| - cron: "0 */6 * * *" | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| python-version: | |
| - '3.10' | |
| singularity-version: | |
| - '3.8.3' | |
| steps: | |
| - name: Checkout bot code | |
| uses: actions/checkout@v3 | |
| - name: Cache downloads | |
| uses: actions/cache@v2 | |
| with: | |
| path: | | |
| ~/.cache/pip | |
| key: ${{ runner.os }}_Python-${{ matrix.python-version }}_Singularity-${{ matrix.singularity-version }} | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v3 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install Python dependencies | |
| run: | | |
| python -m pip install --requirement requirements.in | |
| - name: Fetch images and generate build script | |
| run: | | |
| ./populate_build.py | |
| - name: Set up Singularity ${{ matrix.singularity-version }} | |
| uses: eWaterCycle/setup-singularity@v7 | |
| with: | |
| singularity-version: ${{ matrix.singularity-version }} | |
| - name: Build images | |
| run: | | |
| echo "${{ secrets.DEPOT_GALAXYPROJECT_ORG }}" > ssh_key && chmod 600 ssh_key | |
| ./build.sh |