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Updated one_cell_minds.ipynb
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MFSY authored Apr 3, 2024
1 parent cf46612 commit 69671ea
Showing 1 changed file with 4 additions and 4 deletions.
Original file line number Diff line number Diff line change
Expand Up @@ -139,7 +139,7 @@
"metadata": {},
"outputs": [],
"source": [
"r = requests.get('https://raw.githubusercontent.com/BlueBrain/nexus/ef830192d4e7bb95f9351c4bdab7b0114c27e2f0/docs/src/main/paradox/docs/getting-started/notebooks/rdfmodel/jsonldcontext.json')\n",
"r = requests.get('https://raw.githubusercontent.com/BlueBrain/nexus/638047f9b2aff2fe3eb7078c3bea663316953f19/docs/src/main/paradox/docs/getting-started/notebooks/rdfmodel/jsonldcontext.json')\n",
"dirpath = './rdfmodel'\n",
"Path(dirpath).mkdir(parents=True, exist_ok=True)\n",
"with open(f'{dirpath}/jsonldcontext.json', 'w') as outfile:\n",
Expand All @@ -162,7 +162,7 @@
"metadata": {},
"outputs": [],
"source": [
"forge = KnowledgeGraphForge(\"https://raw.githubusercontent.com/BlueBrain/nexus/ef830192d4e7bb95f9351c4bdab7b0114c27e2f0/docs/src/main/paradox/docs/getting-started/notebooks/forge.yml\",\n",
"forge = KnowledgeGraphForge(\"https://raw.githubusercontent.com/BlueBrain/nexus/638047f9b2aff2fe3eb7078c3bea663316953f19/docs/src/main/paradox/docs/getting-started/notebooks/forge.yml\",\n",
" bucket=f\"{ORG}/{PROJECT}\",\n",
" endpoint=\"https://sandbox.bluebrainnexus.io/v1\",\n",
" token=TOKEN,\n",
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"metadata": {},
"outputs": [],
"source": [
"allen_nm_mapping = DictionaryMapping.load(\"https://raw.githubusercontent.com/BlueBrain/nexus/ef830192d4e7bb95f9351c4bdab7b0114c27e2f0/docs/src/main/paradox/docs/getting-started/notebooks/mappings/allen_morphology_dataset.hjson\")\n",
"allen_nm_mapping = DictionaryMapping.load(\"https://raw.githubusercontent.com/BlueBrain/nexus/638047f9b2aff2fe3eb7078c3bea663316953f19/docs/src/main/paradox/docs/getting-started/notebooks/mappings/allen_morphology_dataset.hjson\")\n",
"nm_allen_resources = forge.map(nm_allen_metadata, allen_nm_mapping, na='')"
]
},
Expand All @@ -351,7 +351,7 @@
"metadata": {},
"outputs": [],
"source": [
"allen_ephys_mapping = DictionaryMapping.load(\"https://raw.githubusercontent.com/BlueBrain/nexus/ef830192d4e7bb95f9351c4bdab7b0114c27e2f0/docs/src/main/paradox/docs/getting-started/notebooks/mappings/allen_ephys_dataset.hjson\")\n",
"allen_ephys_mapping = DictionaryMapping.load(\"https://raw.githubusercontent.com/BlueBrain/nexus/638047f9b2aff2fe3eb7078c3bea663316953f19/docs/src/main/paradox/docs/getting-started/notebooks/mappings/allen_ephys_dataset.hjson\")\n",
"nephys_allen_resources = forge.map(nm_allen_metadata, allen_ephys_mapping, na='')"
]
},
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