Change oxDNA Backend to MDAnalysis #1117
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| name: docs-build-deploy | |
| on: | |
| workflow_dispatch: | |
| push: | |
| branches: ["main", "docs-*"] | |
| pull_request: | |
| branches: ["*"] | |
| release: | |
| types: [published] | |
| jobs: | |
| build-docs: | |
| runs-on: ubuntu-latest | |
| permissions: write-all | |
| env: | |
| BLENDER_VERSION: blender-4.2.0-linux-x64 | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version: "3.11.7" | |
| cache: pip | |
| - uses: quarto-dev/quarto-actions/setup@v2 | |
| - name: Set derived environment variables | |
| run: | | |
| echo "BLENDER_FILENAME=${{ env.BLENDER_VERSION }}.tar.xz" >> $GITHUB_ENV | |
| echo "BLENDER_URL=https://mirrors.iu13.net/blender/release/Blender4.2/${{ env.BLENDER_VERSION }}.tar.xz" >> $GITHUB_ENV | |
| - name: Install Blender Dependencies | |
| run: | | |
| sudo apt-get install libxxf86vm-dev -y | |
| sudo apt-get install libxfixes3 -y | |
| sudo apt-get install libxi-dev -y | |
| sudo apt-get install libxkbcommon-x11-0 -y | |
| sudo apt-get install libgl1-mesa-glx -y | |
| - name: Download & Extract Blender | |
| run: | | |
| wget -q $BLENDER_URL | |
| tar -xf $BLENDER_FILENAME | |
| rm -rf $BLENDER_FILENAME | |
| - name: Add Blender executable to path | |
| run: | | |
| echo "${{ github.workspace }}/${{ env.BLENDER_VERSION }}/" >> $GITHUB_PATH | |
| - name: Build docs using blender | |
| run: | | |
| blender -b --python tests/python.py -- -m pip install . | |
| blender -b --python docs/generate.py | |
| - name: Build Docs | |
| run: quarto render docs | |
| # push to netlify ------------------------------------------------------- | |
| # set release name ---- | |
| - name: Configure pull release name | |
| if: ${{github.event_name == 'pull_request'}} | |
| run: | | |
| echo "RELEASE_NAME=pr-${PR_NUMBER}" >> $GITHUB_ENV | |
| env: | |
| PR_NUMBER: ${{ github.event.number }} | |
| - name: Configure branch release name | |
| if: ${{github.event_name != 'pull_request'}} | |
| run: | | |
| # use branch name, but replace slashes. E.g. feat/a -> feat-a | |
| echo "RELEASE_NAME=${GITHUB_REF_NAME/\//-}" >> $GITHUB_ENV | |
| # deploy ---- | |
| - name: Create Github Deployment | |
| uses: bobheadxi/[email protected] | |
| if: github.event.pull_request.head.repo.full_name == github.repository | |
| id: deployment | |
| with: | |
| step: start | |
| token: ${{ secrets.GITHUB_TOKEN }} | |
| env: ${{ env.RELEASE_NAME }} | |
| ref: ${{ github.head_ref }} | |
| transient: true | |
| logs: 'https://github.com/${{ github.repository }}/actions/runs/${{ github.run_id }}' | |
| - name: Netlify docs preview | |
| if: github.event.pull_request.head.repo.full_name == github.repository | |
| run: | | |
| npm install -g netlify-cli | |
| # push main branch to production, others to preview -- | |
| if [ "${ALIAS}" == "main" ]; then | |
| netlify deploy --dir=docs/_build --alias="main" | |
| else | |
| netlify deploy --dir=docs/_build --alias="${ALIAS}" | |
| fi | |
| env: | |
| NETLIFY_SITE_ID: ${{ secrets.NETLIFY_SITE_ID }} | |
| NETLIFY_AUTH_TOKEN: ${{ secrets.NETLIFY_AUTH_TOKEN }} | |
| ALIAS: ${{ steps.deployment.outputs.env }} | |
| - name: Update Github Deployment | |
| if: github.event.pull_request.head.repo.full_name == github.repository | |
| uses: bobheadxi/[email protected] | |
| with: | |
| step: finish | |
| token: ${{ secrets.GITHUB_TOKEN }} | |
| status: ${{ job.status }} | |
| deployment_id: ${{ steps.deployment.outputs.deployment_id }} | |
| env_url: 'https://${{ steps.deployment.outputs.env }}--molecularnodes.netlify.app' | |
| logs: 'https://github.com/${{ github.repository }}/actions/runs/${{ github.run_id }}' | |
| - name: Deploy Release Documentation | |
| uses: peaceiris/actions-gh-pages@v3 | |
| if: github.event_name == 'release' | |
| with: | |
| github_token: ${{ secrets.GITHUB_TOKEN }} | |
| publish_dir: docs/_build |