BUG: Remove secondary call to segmentation generation

Regression initially introduced in e036c22. The secondary call is removed here to prevent multiple calls to the automatic segmentation pipeline.
BrownBiomechanics · Jul 31, 2024 · aec6381 · aec6381
1 parent de29b1e
commit aec6381
Showing 1 changed file with 1 addition and 7 deletions.
diff --git a/AutoscoperM/AutoscoperM.py b/AutoscoperM/AutoscoperM.py
@@ -708,20 +708,14 @@ def onSegmentation(self):
                         currentVolumeNode,
                         self.ui.segGen_ThresholdSpinBox.value,
                         self.ui.segGen_marginSizeSpin.value,
+                        progressCallback=self.updateProgressBar,
                     )
                     progress = (i + 1) / numFrames * 100
                     self.ui.progressBar.setValue(progress)
                     if self.logic.IsSequenceVolume(volumeNode):
                         segmentationSequenceNode.SetDataNodeAtValue(segmentationNode, str(i))
                         slicer.mrmlScene.RemoveNode(segmentationNode)
                         currentVolumeNode = self.logic.getNextItemInSequence(volumeNode)
-
-                segmentationNode = SubVolumeExtraction.automaticSegmentation(
-                    volumeNode,
-                    self.ui.segGen_ThresholdSpinBox.value,
-                    self.ui.segGen_marginSizeSpin.value,
-                    progressCallback=self.updateProgressBar,
-                )
             elif self.ui.segGen_fileRadioButton.isChecked():
                 segmentationFileDir = self.ui.segGen_lineEdit.currentPath
                 if not self.logic.validatePaths(segmentationFileDir=segmentationFileDir):