Merge pull request #76 from CSBiology/developer

Update master with changes up to 1.0.0 from developer

.github/ISSUE_TEMPLATE/documentation.md

@@ -0,0 +1,16 @@
+---
+name: Documentation
+about: Found missing documentation or Errors in the docs? this is the place to go.
+title: "[Docs]"
+labels: documentation
+assignees: ''
+
+---
+
+**Found undocumented code? Please link it here**
+A link to the code in the repository.
+
+**Found a problem with existing documentation?**
+Describe the issue you have with existing documentation e.g. "The example code is rather complex, it can be simplified by ..."
+
+**

.gitignore

@@ -178,6 +178,8 @@ release.cmd
 release.sh
 localpackages/
 paket-files
+.paket/.store
+.paket/paket.exe
 *.orig
 .fake
 docsrc/tools/FSharp.Formatting.svclog

.paket/Paket.Restore.targets

@@ -5,6 +5,11 @@
     <!-- make MSBuild track this file for incremental builds. -->
     <!-- ref https://blogs.msdn.microsoft.com/msbuild/2005/09/26/how-to-ensure-changes-to-a-custom-target-file-prompt-a-rebuild/ -->
     <MSBuildAllProjects>$(MSBuildAllProjects);$(MSBuildThisFileFullPath)</MSBuildAllProjects>
+
+    <DetectedMSBuildVersion>$(MSBuildVersion)</DetectedMSBuildVersion>
+    <DetectedMSBuildVersion Condition="$(MSBuildVersion) == ''">15.0.0</DetectedMSBuildVersion>
+    <MSBuildSupportsHashing>false</MSBuildSupportsHashing>
+    <MSBuildSupportsHashing Condition=" '$(DetectedMSBuildVersion)' &gt; '15.8.0' ">true</MSBuildSupportsHashing>
     <!-- Mark that this target file has been loaded.  -->
     <IsPaketRestoreTargetsFileLoaded>true</IsPaketRestoreTargetsFileLoaded>
     <PaketToolsPath>$(MSBuildThisFileDirectory)</PaketToolsPath>
@@ -73,37 +78,47 @@
     <MSBuild Projects="$(PaketToolsPath)paket.bootstrapper.proj" Targets="Restore" />
   </Target>
 
+  <!-- Official workaround for https://docs.microsoft.com/en-us/visualstudio/msbuild/getfilehash-task?view=vs-2019 -->
+  <UsingTask TaskName="Microsoft.Build.Tasks.GetFileHash" AssemblyName="Microsoft.Build.Tasks.Core, Version=15.1.0.0, Culture=neutral, PublicKeyToken=b03f5f7f11d50a3a" Condition=" '$(MSBuildSupportsHashing)' == 'true' And '$(DetectedMSBuildVersion)' &lt; '16.0.360' " />
+  <UsingTask TaskName="Microsoft.Build.Tasks.VerifyFileHash" AssemblyName="Microsoft.Build.Tasks.Core, Version=15.1.0.0, Culture=neutral, PublicKeyToken=b03f5f7f11d50a3a" Condition=" '$(MSBuildSupportsHashing)' == 'true' And '$(DetectedMSBuildVersion)' &lt; '16.0.360' " />
   <Target Name="PaketRestore" Condition="'$(PaketRestoreDisabled)' != 'True'" BeforeTargets="_GenerateDotnetCliToolReferenceSpecs;_GenerateProjectRestoreGraphPerFramework;_GenerateRestoreGraphWalkPerFramework;CollectPackageReferences" DependsOnTargets="PaketBootstrapping">
 
-    <!-- Step 1 Check if lockfile is properly restored -->
+    <!-- Step 1 Check if lockfile is properly restored (if the hash of the lockfile and the cache-file match) -->
     <PropertyGroup>
       <PaketRestoreRequired>true</PaketRestoreRequired>
       <NoWarn>$(NoWarn);NU1603;NU1604;NU1605;NU1608</NoWarn>
+      <CacheFilesExist>false</CacheFilesExist>
+      <CacheFilesExist Condition=" Exists('$(PaketRestoreCacheFile)') And Exists('$(PaketLockFilePath)') ">true</CacheFilesExist>
     </PropertyGroup>
 
-    <!-- Because ReadAllText is slow on osx/linux, try to find shasum and awk -->
-    <PropertyGroup>
-      <PaketRestoreCachedHasher Condition="'$(OS)' != 'Windows_NT' And '$(PaketRestoreCachedHasher)' == '' And Exists('/usr/bin/shasum') And Exists('/usr/bin/awk')">/usr/bin/shasum "$(PaketRestoreCacheFile)" | /usr/bin/awk '{ print $1 }'</PaketRestoreCachedHasher>
-      <PaketRestoreLockFileHasher Condition="'$(OS)' != 'Windows_NT' And '$(PaketRestoreLockFileHash)' == '' And Exists('/usr/bin/shasum') And Exists('/usr/bin/awk')">/usr/bin/shasum "$(PaketLockFilePath)" | /usr/bin/awk '{ print $1 }'</PaketRestoreLockFileHasher>
+    <!-- Read the hash of the lockfile -->
+    <GetFileHash Condition=" '$(MSBuildSupportsHashing)' == 'true' And '$(CacheFilesExist)' == 'true' " Files="$(PaketLockFilePath)" Algorithm="SHA256" HashEncoding="hex" >
+      <Output TaskParameter="Hash" PropertyName="PaketRestoreLockFileHash" />
+    </GetFileHash>
+    <!-- Read the hash of the cache, which is json, but a very simple key value object -->
+    <PropertyGroup Condition=" '$(MSBuildSupportsHashing)' == 'true' And '$(CacheFilesExist)' == 'true' ">
+        <PaketRestoreCachedContents>$([System.IO.File]::ReadAllText('$(PaketRestoreCacheFile)'))</PaketRestoreCachedContents>
+    </PropertyGroup>
+    <ItemGroup Condition=" '$(MSBuildSupportsHashing)' == 'true' And '$(CacheFilesExist)' == 'true' ">
+        <!-- Parse our simple 'paket.restore.cached' json ...-->
+        <PaketRestoreCachedSplitObject Include="$([System.Text.RegularExpressions.Regex]::Split(`$(PaketRestoreCachedContents)`, `{|}|,`))"></PaketRestoreCachedSplitObject>
+        <!-- Keep Key, Value ItemGroup-->
+        <PaketRestoreCachedKeyValue Include="@(PaketRestoreCachedSplitObject)" 
+            Condition=" $([System.Text.RegularExpressions.Regex]::Split(`%(Identity)`, `&quot;: &quot;`).Length) &gt; 1 ">
+          <Key>$([System.Text.RegularExpressions.Regex]::Split(`%(Identity)`, `": "`)[0].Replace(`"`, ``).Replace(` `, ``))</Key>
+          <Value>$([System.Text.RegularExpressions.Regex]::Split(`%(Identity)`, `": "`)[1].Replace(`"`, ``).Replace(` `, ``))</Value>
+        </PaketRestoreCachedKeyValue>
+    </ItemGroup>
+    <PropertyGroup Condition=" '$(MSBuildSupportsHashing)' == 'true' And '$(CacheFilesExist)' == 'true' ">
+        <!-- Retrieve the hashes we are interested in -->
+        <PackagesDownloadedHash Condition=" '%(PaketRestoreCachedKeyValue.Key)' == 'packagesDownloadedHash' ">%(PaketRestoreCachedKeyValue.Value)</PackagesDownloadedHash>
+        <ProjectsRestoredHash Condition=" '%(PaketRestoreCachedKeyValue.Key)' == 'projectsRestoredHash' ">%(PaketRestoreCachedKeyValue.Value)</ProjectsRestoredHash>
     </PropertyGroup>
 
-    <!-- If shasum and awk exist get the hashes -->
-    <Exec StandardOutputImportance="Low" Condition=" '$(PaketRestoreCachedHasher)' != '' " Command="$(PaketRestoreCachedHasher)" ConsoleToMSBuild='true'>
-      <Output TaskParameter="ConsoleOutput" PropertyName="PaketRestoreCachedHash" />
-    </Exec>
-    <Exec StandardOutputImportance="Low" Condition=" '$(PaketRestoreLockFileHasher)' != '' " Command="$(PaketRestoreLockFileHasher)" ConsoleToMSBuild='true'>
-      <Output TaskParameter="ConsoleOutput" PropertyName="PaketRestoreLockFileHash" />
-    </Exec>
-
-    <!-- Debug whats going on -->
-    <Message Importance="low" Text="calling paket restore with targetframework=$(TargetFramework) targetframeworks=$(TargetFrameworks)" />
-
-    <PropertyGroup Condition="Exists('$(PaketRestoreCacheFile)') ">
-      <!-- if no hash has been done yet fall back to just reading in the files and comparing them -->
-      <PaketRestoreCachedHash Condition=" '$(PaketRestoreCachedHash)' == '' ">$([System.IO.File]::ReadAllText('$(PaketRestoreCacheFile)'))</PaketRestoreCachedHash>
-      <PaketRestoreLockFileHash Condition=" '$(PaketRestoreLockFileHash)' == '' ">$([System.IO.File]::ReadAllText('$(PaketLockFilePath)'))</PaketRestoreLockFileHash>
+    <PropertyGroup Condition=" '$(MSBuildSupportsHashing)' == 'true' And '$(CacheFilesExist)' == 'true' ">
+      <!-- If the restore file doesn't exist we need to restore, otherwise only if hashes don't match -->
       <PaketRestoreRequired>true</PaketRestoreRequired>
-      <PaketRestoreRequired Condition=" '$(PaketRestoreLockFileHash)' == '$(PaketRestoreCachedHash)' ">false</PaketRestoreRequired>
+      <PaketRestoreRequired Condition=" '$(PaketRestoreLockFileHash)' == '$(ProjectsRestoredHash)' ">false</PaketRestoreRequired>
       <PaketRestoreRequired Condition=" '$(PaketRestoreLockFileHash)' == '' ">true</PaketRestoreRequired>
     </PropertyGroup>
 
@@ -116,7 +131,10 @@
     </PropertyGroup>
 
     <!-- Do a global restore if required -->
+    <Warning Text="This version of MSBuild (we assume '$(DetectedMSBuildVersion)' or older) doesn't support GetFileHash, so paket fast restore is disabled." Condition=" '$(MSBuildSupportsHashing)' != 'true' " />
+    <Error Text="Stop build because of PAKET_ERROR_ON_MSBUILD_EXEC and we always call the bootstrapper" Condition=" '$(PAKET_ERROR_ON_MSBUILD_EXEC)' == 'true' AND '$(PaketBootstrapperStyle)' == 'classic' AND Exists('$(PaketBootStrapperExePath)') AND !(Exists('$(PaketExePath)'))" />
     <Exec Command='$(PaketBootStrapperCommand)' Condition=" '$(PaketBootstrapperStyle)' == 'classic' AND Exists('$(PaketBootStrapperExePath)') AND !(Exists('$(PaketExePath)'))" ContinueOnError="false" />
+    <Error Text="Stop build because of PAKET_ERROR_ON_MSBUILD_EXEC and we need a full restore (hashes don't match)" Condition=" '$(PAKET_ERROR_ON_MSBUILD_EXEC)' == 'true' AND '$(PaketRestoreRequired)' == 'true' AND '$(PaketDisableGlobalRestore)' != 'true'" />
     <Exec Command='$(PaketCommand) restore' Condition=" '$(PaketRestoreRequired)' == 'true' AND '$(PaketDisableGlobalRestore)' != 'true' " ContinueOnError="false" />
 
     <!-- Step 2 Detect project specific changes -->
@@ -126,7 +144,7 @@
       <MyTargetFrameworks Condition="'$(TargetFrameworks)' != '' AND '$(TargetFramework)' == '' " Include="$(TargetFrameworks)"></MyTargetFrameworks>
       <PaketResolvedFilePaths Include="@(MyTargetFrameworks -> '$(PaketIntermediateOutputPath)\$(MSBuildProjectFile).%(Identity).paket.resolved')"></PaketResolvedFilePaths>
     </ItemGroup>
-    <Message Importance="low" Text="MyTargetFrameworks=@(MyTargetFrameworks) PaketResolvedFilePaths=@(PaketResolvedFilePaths)" />
+
     <PropertyGroup>
       <PaketReferencesCachedFilePath>$(PaketIntermediateOutputPath)\$(MSBuildProjectFile).paket.references.cached</PaketReferencesCachedFilePath>
       <!-- MyProject.fsproj.paket.references has the highest precedence -->
@@ -163,6 +181,7 @@
 
     <!-- Step 3 Restore project specific stuff if required -->
     <Message Condition=" '$(PaketRestoreRequired)' == 'true' " Importance="low" Text="Detected a change ('$(PaketRestoreRequiredReason)') in the project file '$(MSBuildProjectFullPath)', calling paket restore" />
+    <Error Text="Stop build because of PAKET_ERROR_ON_MSBUILD_EXEC and we detected a change ('$(PaketRestoreRequiredReason)') in the project file '$(MSBuildProjectFullPath)'" Condition=" '$(PAKET_ERROR_ON_MSBUILD_EXEC)' == 'true' AND '$(PaketRestoreRequired)' == 'true' " />
     <Exec Command='$(PaketCommand) restore --project "$(MSBuildProjectFullPath)" --output-path "$(PaketIntermediateOutputPath)" --target-framework "$(TargetFrameworks)"' Condition=" '$(PaketRestoreRequired)' == 'true' AND '$(TargetFramework)' == '' " ContinueOnError="false" />
     <Exec Command='$(PaketCommand) restore --project "$(MSBuildProjectFullPath)" --output-path "$(PaketIntermediateOutputPath)" --target-framework "$(TargetFramework)"' Condition=" '$(PaketRestoreRequired)' == 'true' AND '$(TargetFramework)' != '' " ContinueOnError="false" />
 
@@ -224,8 +243,6 @@
   <Target Name="PaketDisableDirectPack" AfterTargets="_IntermediatePack" BeforeTargets="GenerateNuspec" Condition="('$(IsPackable)' == '' Or '$(IsPackable)' == 'true') And Exists('$(PaketIntermediateOutputPath)/$(MSBuildProjectFile).references')" >
     <PropertyGroup>
       <ContinuePackingAfterGeneratingNuspec>false</ContinuePackingAfterGeneratingNuspec>
-      <DetectedMSBuildVersion>$(MSBuildVersion)</DetectedMSBuildVersion>
-      <DetectedMSBuildVersion Condition="$(MSBuildVersion) == ''">15.8.0</DetectedMSBuildVersion>
     </PropertyGroup>
   </Target>
 
@@ -252,10 +269,12 @@
     </PropertyGroup>
 
     <ItemGroup>
-      <_NuspecFiles Include="$(AdjustedNuspecOutputPath)\*.nuspec"/>
+      <_NuspecFiles Include="$(AdjustedNuspecOutputPath)\*.$(PackageVersion.Split(`+`)[0]).nuspec"/>
     </ItemGroup>
 
-    <Exec Command='$(PaketCommand) fix-nuspecs files "@(_NuspecFiles)" project-file "$(PaketProjectFile)" ' Condition="@(_NuspecFiles) != ''" />
+    <Error Text="Error Because of PAKET_ERROR_ON_MSBUILD_EXEC (not calling fix-nuspecs)" Condition=" '$(PAKET_ERROR_ON_MSBUILD_EXEC)' == 'true' " />
+    <Exec Condition="@(_NuspecFiles) != ''" Command='$(PaketCommand) fix-nuspecs files "@(_NuspecFiles)" project-file "$(PaketProjectFile)" ' />
+    <Error Condition="@(_NuspecFiles) == ''" Text='Could not find nuspec files in "$(AdjustedNuspecOutputPath)" (Version: "$(PackageVersion)"), therefore we cannot call "paket fix-nuspecs" and have to error out!' />
 
     <ConvertToAbsolutePath Condition="@(_NuspecFiles) != ''" Paths="@(_NuspecFiles)">
       <Output TaskParameter="AbsolutePaths" PropertyName="NuspecFileAbsolutePath" />

.travis.yml

@@ -6,14 +6,14 @@ mono: latest
 dotnet : 2.1.403
 
 before_install:
-
+ - export PATH=$PATH:/home/travis/.dotnet/tools
+ - dotnet tool install paket -g
  - dotnet restore build.proj
 
-
 script:
  - dotnet fake build --target Linux
 
 branches:
-  except:
-    - gh-pages
-    - nuget
+  only:
+  - master
+  - developer

BioFSharp.sln

@@ -1,7 +1,7 @@
 
 Microsoft Visual Studio Solution File, Format Version 12.00
-# Visual Studio 15
-VisualStudioVersion = 15.0.27703.2000
+# Visual Studio Version 16
+VisualStudioVersion = 16.0.29102.190
 MinimumVisualStudioVersion = 10.0.40219.1
 Project("{2150E333-8FDC-42A3-9474-1A3956D46DE8}") = ".paket", ".paket", "{63297B98-5CED-492C-A5B7-A5B4F73CF142}"
 	ProjectSection(SolutionItems) = preProject
@@ -14,6 +14,7 @@ Project("{6EC3EE1D-3C4E-46DD-8F32-0CC8E7565705}") = "BioFSharp", "src\BioFSharp\
 EndProject
 Project("{2150E333-8FDC-42A3-9474-1A3956D46DE8}") = "project", "project", "{BF60BC93-E09B-4E5F-9D85-95A519479D54}"
 	ProjectSection(SolutionItems) = preProject
+		LICENSE = LICENSE
 		README.md = README.md
 		RELEASE_NOTES.md = RELEASE_NOTES.md
 	EndProjectSection
@@ -33,6 +34,7 @@ Project("{2150E333-8FDC-42A3-9474-1A3956D46DE8}") = "content", "content", "{8E6D
 		docsrc\content\BioID.fsx = docsrc\content\BioID.fsx
 		docsrc\content\BioItem.fsx = docsrc\content\BioItem.fsx
 		docsrc\content\BioTools-tmhmm.fsx = docsrc\content\BioTools-tmhmm.fsx
+		docsrc\content\Blast.fsx = docsrc\content\Blast.fsx
 		docsrc\content\BlastWrapper.fsx = docsrc\content\BlastWrapper.fsx
 		docsrc\content\Clustal.fsx = docsrc\content\Clustal.fsx
 		docsrc\content\ClustalOWrapper.fsx = docsrc\content\ClustalOWrapper.fsx
@@ -42,8 +44,8 @@ Project("{2150E333-8FDC-42A3-9474-1A3956D46DE8}") = "content", "content", "{8E6D
 		docsrc\content\Formula.fsx = docsrc\content\Formula.fsx
 		docsrc\content\FSIPrinters.fsx = docsrc\content\FSIPrinters.fsx
 		docsrc\content\GenBank.fsx = docsrc\content\GenBank.fsx
-		docsrc\content\GESA.fsx = docsrc\content\GESA.fsx
 		docsrc\content\GFF3.fsx = docsrc\content\GFF3.fsx
+		docsrc\content\GSEA.fsx = docsrc\content\GSEA.fsx
 		docsrc\content\index.fsx = docsrc\content\index.fsx
 		docsrc\content\Introduction.fsx = docsrc\content\Introduction.fsx
 		docsrc\content\MoleculeFinding.fsx = docsrc\content\MoleculeFinding.fsx
@@ -69,6 +71,7 @@ Project("{2150E333-8FDC-42A3-9474-1A3956D46DE8}") = "git", "git", "{078A9C52-DDC
 		.github\ISSUE_TEMPLATE\bug_report.md = .github\ISSUE_TEMPLATE\bug_report.md
 		CODE_OF_CONDUCT.md = CODE_OF_CONDUCT.md
 		.github\CONTRIBUTING.md = .github\CONTRIBUTING.md
+		.github\ISSUE_TEMPLATE\documentation.md = .github\ISSUE_TEMPLATE\documentation.md
 		.github\ISSUE_TEMPLATE\feature_request.md = .github\ISSUE_TEMPLATE\feature_request.md
 		PULL_REQUEST_TEMPLATE.md = PULL_REQUEST_TEMPLATE.md
 	EndProjectSection
@@ -95,10 +98,10 @@ Project("{6EC3EE1D-3C4E-46DD-8F32-0CC8E7565705}") = "BioFSharp.Vis", "src\BioFSh
 EndProject
 Project("{6EC3EE1D-3C4E-46DD-8F32-0CC8E7565705}") = "BioFSharp.ImgP", "src\BioFSharp.ImgP\BioFSharp.ImgP.fsproj", "{1EB6FB44-6B1E-4939-BF49-267D163959FF}"
 EndProject
-Project("{6EC3EE1D-3C4E-46DD-8F32-0CC8E7565705}") = "BioFSharp.BioTools", "src\BioFSharp.BioTools\BioFSharp.BioTools.fsproj", "{9E8A5AED-DD3C-4250-A9B2-164B08238F8E}"
-EndProject
 Project("{6EC3EE1D-3C4E-46DD-8F32-0CC8E7565705}") = "BioFSharp.ML", "src\BioFSharp.ML\BioFSharp.ML.fsproj", "{B46C2CB5-8EC2-425B-9B15-D0BAEF30C08F}"
 EndProject
+Project("{6EC3EE1D-3C4E-46DD-8F32-0CC8E7565705}") = "BioFSharp.BioContainers", "src\BioFSharp.BioContainers\BioFSharp.BioContainers.fsproj", "{6055D81F-D817-44B3-B82B-F35E9ACB4802}"
+EndProject
 Global
 	GlobalSection(SolutionConfigurationPlatforms) = preSolution
 		Debug|Any CPU = Debug|Any CPU
@@ -153,18 +156,18 @@ Global
 		{1EB6FB44-6B1E-4939-BF49-267D163959FF}.Mono|Any CPU.Build.0 = Mono|Any CPU
 		{1EB6FB44-6B1E-4939-BF49-267D163959FF}.Release|Any CPU.ActiveCfg = Release|Any CPU
 		{1EB6FB44-6B1E-4939-BF49-267D163959FF}.Release|Any CPU.Build.0 = Release|Any CPU
-		{9E8A5AED-DD3C-4250-A9B2-164B08238F8E}.Debug|Any CPU.ActiveCfg = Debug|Any CPU
-		{9E8A5AED-DD3C-4250-A9B2-164B08238F8E}.Debug|Any CPU.Build.0 = Debug|Any CPU
-		{9E8A5AED-DD3C-4250-A9B2-164B08238F8E}.Mono|Any CPU.ActiveCfg = Mono|Any CPU
-		{9E8A5AED-DD3C-4250-A9B2-164B08238F8E}.Mono|Any CPU.Build.0 = Mono|Any CPU
-		{9E8A5AED-DD3C-4250-A9B2-164B08238F8E}.Release|Any CPU.ActiveCfg = Release|Any CPU
-		{9E8A5AED-DD3C-4250-A9B2-164B08238F8E}.Release|Any CPU.Build.0 = Release|Any CPU
 		{B46C2CB5-8EC2-425B-9B15-D0BAEF30C08F}.Debug|Any CPU.ActiveCfg = Debug|Any CPU
 		{B46C2CB5-8EC2-425B-9B15-D0BAEF30C08F}.Debug|Any CPU.Build.0 = Debug|Any CPU
 		{B46C2CB5-8EC2-425B-9B15-D0BAEF30C08F}.Mono|Any CPU.ActiveCfg = Mono|Any CPU
 		{B46C2CB5-8EC2-425B-9B15-D0BAEF30C08F}.Mono|Any CPU.Build.0 = Mono|Any CPU
 		{B46C2CB5-8EC2-425B-9B15-D0BAEF30C08F}.Release|Any CPU.ActiveCfg = Release|Any CPU
 		{B46C2CB5-8EC2-425B-9B15-D0BAEF30C08F}.Release|Any CPU.Build.0 = Release|Any CPU
+		{6055D81F-D817-44B3-B82B-F35E9ACB4802}.Debug|Any CPU.ActiveCfg = Debug|Any CPU
+		{6055D81F-D817-44B3-B82B-F35E9ACB4802}.Debug|Any CPU.Build.0 = Debug|Any CPU
+		{6055D81F-D817-44B3-B82B-F35E9ACB4802}.Mono|Any CPU.ActiveCfg = Mono|Any CPU
+		{6055D81F-D817-44B3-B82B-F35E9ACB4802}.Mono|Any CPU.Build.0 = Mono|Any CPU
+		{6055D81F-D817-44B3-B82B-F35E9ACB4802}.Release|Any CPU.ActiveCfg = Release|Any CPU
+		{6055D81F-D817-44B3-B82B-F35E9ACB4802}.Release|Any CPU.Build.0 = Release|Any CPU
 	EndGlobalSection
 	GlobalSection(SolutionProperties) = preSolution
 		HideSolutionNode = FALSE

LICENSE

@@ -0,0 +1,12 @@
+Copyright 2019 CSBiology
+
+Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation files (the "Software"), to deal in the 
+Software without restriction, including without limitation the rights to use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies of the Software, 
+and to permit persons to whom the Software is furnished to do so, subject to the following conditions:
+
+The above copyright notice and this permission notice shall be included in all copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF 
+MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR 
+ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH 
+THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.